RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 SRGNP10124 158 aa9.31□□□□□ -0.92
SND1-205ENST00000467238 ST5P78524 1137 aa9.31□□□□□ -0.92
SND1-205ENST00000467238 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
SND1-205ENST00000467238 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
SND1-205ENST00000467238 ZNF652Q9Y2D9 606 aa9.31□□□□□ -0.92
SND1-205ENST00000467238 SCN4AP35499 1836 aa9.31□□□□□ -0.92
SND1-205ENST00000467238 RCCD1A6NED2 376 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 NPHP1O15259 732 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 SMPD1P17405 629 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 RALBP1Q15311 655 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 STYK1Q6J9G0 422 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 NBPF5PQ86XG9 351 aaPredicted RBP9.3□□□□□ -0.92
SND1-205ENST00000467238 C16orf71Q8IYS4 520 aaPredicted RBP9.3□□□□□ -0.92
SND1-205ENST00000467238 PNISRQ8TF01 805 aaKnown RBP9.3□□□□□ -0.92
SND1-205ENST00000467238 CNKSR1Q969H4 720 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 THUMPD2Q9BTF0 503 aaKnown RBP9.3□□□□□ -0.92
SND1-205ENST00000467238 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 FCF1Q9Y324 198 aaKnown RBP9.3□□□□□ -0.92
SND1-205ENST00000467238 MAPK8IP3Q9UPT6 1336 aa9.3□□□□□ -0.92
SND1-205ENST00000467238 KLRG2A4D1S0 409 aaPredicted RBP9.29□□□□□ -0.92
SND1-205ENST00000467238 GLTPD2A6NH11 291 aa9.29□□□□□ -0.92
SND1-205ENST00000467238 C21orf2O43822 256 aa9.29□□□□□ -0.92
SND1-205ENST00000467238 CD2BP2O95400 341 aaKnown RBP9.29□□□□□ -0.92
SND1-205ENST00000467238 EIF4A1P60842 406 aaKnown RBP9.29□□□□□ -0.92
SND1-205ENST00000467238 HLFQ16534 295 aa9.29□□□□□ -0.92
SND1-205ENST00000467238 PRPF40BQ6NWY9 871 aaKnown RBP9.29□□□□□ -0.92
SND1-205ENST00000467238 MASTLQ96GX5 879 aa9.29□□□□□ -0.92
SND1-205ENST00000467238 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
SND1-205ENST00000467238 NIP7Q9Y221 180 aaKnown RBP eCLIP9.29□□□□□ -0.92
SND1-205ENST00000467238 LTBP3Q9NS15 1303 aa9.29□□□□□ -0.92
SND1-205ENST00000467238 LAMB2P55268 1798 aa9.28□□□□□ -0.92
SND1-205ENST00000467238 FSTL1Q12841 308 aa9.28□□□□□ -0.92
SND1-205ENST00000467238 SUZ12Q15022 739 aaKnown RBP9.28□□□□□ -0.92
SND1-205ENST00000467238 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
SND1-205ENST00000467238 TAF1P21675 1872 aa9.28□□□□□ -0.92
SND1-205ENST00000467238 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
SND1-205ENST00000467238 ERVV-1B6SEH8 477 aa9.27□□□□□ -0.93
SND1-205ENST00000467238 NPR1P16066 1061 aa9.27□□□□□ -0.93
SND1-205ENST00000467238 SOGA3Q5TF21 947 aa9.27□□□□□ -0.93
SND1-205ENST00000467238 TPTE2Q6XPS3 522 aa9.27□□□□□ -0.93
SND1-205ENST00000467238 DNAJC5GQ8N7S2 189 aa9.27□□□□□ -0.93
SND1-205ENST00000467238 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
SND1-205ENST00000467238 MAP3K15Q6ZN16 1313 aa9.27□□□□□ -0.93
SND1-205ENST00000467238 ABCC12Q96J65 1359 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 FAM177BA6PVY3 158 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 VEGFAP15692 232 aaPredicted RBP9.26□□□□□ -0.93
SND1-205ENST00000467238 TMPOP42166 694 aaKnown RBP9.26□□□□□ -0.93
SND1-205ENST00000467238 RIPK4P57078 832 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 DDX10Q13206 875 aaKnown RBP9.26□□□□□ -0.93
SND1-205ENST00000467238 ERFEQ4G0M1 354 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 TTLL7Q6ZT98 887 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 NGEFQ8N5V2 710 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 TSPYL4Q9UJ04 414 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 RRP7AQ9Y3A4 280 aaKnown RBP9.26□□□□□ -0.93
SND1-205ENST00000467238 ERBB4Q15303 1308 aa9.26□□□□□ -0.93
SND1-205ENST00000467238 MYBBP1AQ9BQG0 1328 aaKnown RBP9.26□□□□□ -0.93
SND1-205ENST00000467238 IBTKQ9P2D0 1353 aaPredicted RBP9.25□□□□□ -0.93
SND1-205ENST00000467238 RIC1Q4ADV7 1423 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 MYL6BP14649 208 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 GMPRP36959 345 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 CCDC93Q567U6 631 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 KIF6Q6ZMV9 814 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 LRP10Q7Z4F1 713 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 SMC1BQ8NDV3 1235 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 THAP11Q96EK4 314 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 BABAM1Q9NWV8 329 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 UBN2Q6ZU65 1347 aa9.25□□□□□ -0.93
SND1-205ENST00000467238 SNED1Q8TER0 1413 aa9.24□□□□□ -0.93
SND1-205ENST00000467238 HTRA3P83110 453 aa9.24□□□□□ -0.93
SND1-205ENST00000467238 LMOD3Q0VAK6 560 aa9.24□□□□□ -0.93
SND1-205ENST00000467238 CRY2Q49AN0 593 aa9.24□□□□□ -0.93
SND1-205ENST00000467238 NUTM1Q86Y26 1132 aa9.24□□□□□ -0.93
SND1-205ENST00000467238 FAM160A2Q8N612 972 aaPredicted RBP9.24□□□□□ -0.93
SND1-205ENST00000467238 NYXQ9GZU5 481 aa9.24□□□□□ -0.93
SND1-205ENST00000467238 SENP2Q9HC62 589 aa9.24□□□□□ -0.93
SND1-205ENST00000467238 CACNA1FO60840 1977 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 POLR2AP24928 1970 aaKnown RBP9.23□□□□□ -0.93
SND1-205ENST00000467238 FAM181BA6NEQ2 426 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 J3QL48 77 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 GPTP24298 496 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
SND1-205ENST00000467238 ALDH1B1P30837 517 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 FKBP4Q02790 459 aaKnown RBP eCLIP9.23□□□□□ -0.93
SND1-205ENST00000467238 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
SND1-205ENST00000467238 ZNF34Q8IZ26 560 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 ZSCAN1Q8NBB4 408 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
SND1-205ENST00000467238 KLRG1Q96E93 195 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 ZBTB3Q9H5J0 574 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 PRDM9Q9NQV7 894 aa9.23□□□□□ -0.93
SND1-205ENST00000467238 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
SND1-205ENST00000467238 ADAMTSL1Q8N6G6 1762 aa9.22□□□□□ -0.93
SND1-205ENST00000467238 TRPM7Q96QT4 1865 aa9.22□□□□□ -0.93
SND1-205ENST00000467238 DDNO94850 711 aaPredicted RBP9.22□□□□□ -0.93
SND1-205ENST00000467238 NTSR2O95665 410 aa9.22□□□□□ -0.93
SND1-205ENST00000467238 EIF2S2P20042 333 aaKnown RBP9.22□□□□□ -0.93
SND1-205ENST00000467238 PROSER3Q2NL68 480 aa9.22□□□□□ -0.93
SND1-205ENST00000467238 SUSD4Q5VX71 490 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms