RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 DOCK2Q92608 1830 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 SGIP1Q9BQI5 828 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 MTFR1LQ9H019 292 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 IL25Q9H293 177 aa15.81■□□□□ 0.12
COL4A1-202ENST00000467182 MYO5AQ9Y4I1 1855 aaKnown RBP15.8■□□□□ 0.12
COL4A1-202ENST00000467182 XDHP47989 1333 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
COL4A1-202ENST00000467182 UQCRFS1P1P0C7P4 283 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 CHRNA5P30532 468 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 ALDH1B1P30837 517 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 BCAMP50895 628 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 PI16Q6UXB8 463 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 SP8Q8IXZ3 490 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 DNAJC2Q99543 621 aaKnown RBP15.8■□□□□ 0.12
COL4A1-202ENST00000467182 ESYT1Q9BSJ8 1104 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 ANTXR1Q9H6X2 564 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 PAG1Q9NWQ8 432 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 PODXL2Q9NZ53 605 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 LEMD3Q9Y2U8 911 aa15.8■□□□□ 0.12
COL4A1-202ENST00000467182 COL1A1P02452 1464 aaPredicted RBP15.79■□□□□ 0.12
COL4A1-202ENST00000467182 H0YIN7 160 aa15.79■□□□□ 0.12
COL4A1-202ENST00000467182 ZBTB22O15209 634 aa15.79■□□□□ 0.12
COL4A1-202ENST00000467182 ZAP70P43403 619 aa15.79■□□□□ 0.12
COL4A1-202ENST00000467182 MFAP1P55081 439 aaKnown RBP15.79■□□□□ 0.12
COL4A1-202ENST00000467182 C15orf52Q6ZUT6 534 aaKnown RBP15.79■□□□□ 0.12
COL4A1-202ENST00000467182 FBXO33Q7Z6M2 555 aa15.79■□□□□ 0.12
COL4A1-202ENST00000467182 KBTBD3Q8NAB2 608 aa15.79■□□□□ 0.12
COL4A1-202ENST00000467182 FAM84BQ96KN1 310 aaPredicted RBP15.79■□□□□ 0.12
COL4A1-202ENST00000467182 SNRKQ9NRH2 765 aa15.79■□□□□ 0.12
COL4A1-202ENST00000467182 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
COL4A1-202ENST00000467182 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
COL4A1-202ENST00000467182 MYH7P12883 1935 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 SNED1Q8TER0 1413 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 PSDA5PKW4 1024 aaPredicted RBP15.78■□□□□ 0.12
COL4A1-202ENST00000467182 GOLIM4O00461 696 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 GYG1P46976 350 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 RASGRF1Q13972 1273 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 TXNRD3Q86VQ6 643 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 HMG20BQ9P0W2 317 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 MYH13Q9UKX3 1938 aa15.78■□□□□ 0.12
COL4A1-202ENST00000467182 SGSM2O43147 1006 aa15.77■□□□□ 0.12
COL4A1-202ENST00000467182 CYP2E1P05181 493 aaPredicted RBP15.77■□□□□ 0.12
COL4A1-202ENST00000467182 CASC1Q6TDU7 716 aa15.77■□□□□ 0.12
COL4A1-202ENST00000467182 TICAM2Q86XR7 235 aa15.77■□□□□ 0.12
COL4A1-202ENST00000467182 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL4A1-202ENST00000467182 TBC1D32Q96NH3 1257 aa15.77■□□□□ 0.12
COL4A1-202ENST00000467182 BRCA1P38398 1863 aaKnown RBP15.76■□□□□ 0.11
COL4A1-202ENST00000467182 CHGBP05060 677 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 KCNA3P22001 575 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 ATP2B4P23634 1241 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 KCNJ4P48050 445 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 FKBP4Q02790 459 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL4A1-202ENST00000467182 NMIQ13287 307 aaPredicted RBP15.76■□□□□ 0.11
COL4A1-202ENST00000467182 OLFM4Q6UX06 510 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 SPATA5Q8NB90 893 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 TBC1D16Q8TBP0 767 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 C7orf43Q8WVR3 580 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 FAM227BQ96M60 508 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 PIH1D3Q9NQM4 214 aaKnown RBP15.76■□□□□ 0.11
COL4A1-202ENST00000467182 ANKIB1Q9P2G1 1089 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 POLLQ9UGP5 575 aa15.76■□□□□ 0.11
COL4A1-202ENST00000467182 HIP1O00291 1037 aa15.75■□□□□ 0.11
COL4A1-202ENST00000467182 PTGER2P43116 358 aa15.75■□□□□ 0.11
COL4A1-202ENST00000467182 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
COL4A1-202ENST00000467182 GPR101Q96P66 508 aaPredicted RBP15.75■□□□□ 0.11
COL4A1-202ENST00000467182 USP26Q9BXU7 913 aa15.75■□□□□ 0.11
COL4A1-202ENST00000467182 NSFL1CQ9UNZ2 370 aaKnown RBP15.75■□□□□ 0.11
COL4A1-202ENST00000467182 MED23Q9ULK4 1368 aa15.75■□□□□ 0.11
COL4A1-202ENST00000467182 A0A0D9SFI3 127 aa15.74■□□□□ 0.11
COL4A1-202ENST00000467182 POLD1P28340 1107 aa15.74■□□□□ 0.11
COL4A1-202ENST00000467182 RBM25P49756 843 aaKnown RBP15.74■□□□□ 0.11
COL4A1-202ENST00000467182 CAVIN4Q5BKX8 364 aa15.74■□□□□ 0.11
COL4A1-202ENST00000467182 CWC27Q6UX04 472 aaKnown RBP15.74■□□□□ 0.11
COL4A1-202ENST00000467182 CNKSR1Q969H4 720 aa15.74■□□□□ 0.11
COL4A1-202ENST00000467182 DIAPH3Q9NSV4 1193 aa15.74■□□□□ 0.11
COL4A1-202ENST00000467182 GGA1Q9UJY5 639 aa15.74■□□□□ 0.11
COL4A1-202ENST00000467182 PDS5AQ29RF7 1337 aaKnown RBP15.73■□□□□ 0.11
COL4A1-202ENST00000467182 RAD50Q92878 1312 aa15.73■□□□□ 0.11
COL4A1-202ENST00000467182 UFL1O94874 794 aa15.73■□□□□ 0.11
COL4A1-202ENST00000467182 DPEP1P16444 411 aa15.73■□□□□ 0.11
COL4A1-202ENST00000467182 HIBADHP31937 336 aaKnown RBP15.73■□□□□ 0.11
COL4A1-202ENST00000467182 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
COL4A1-202ENST00000467182 C22orf23Q9BZE7 217 aa15.73■□□□□ 0.11
COL4A1-202ENST00000467182 SEMA3EO15041 775 aa15.72■□□□□ 0.11
COL4A1-202ENST00000467182 RNF113AO15541 343 aaKnown RBP15.72■□□□□ 0.11
COL4A1-202ENST00000467182 EIF5BO60841 1220 aaKnown RBP15.72■□□□□ 0.11
COL4A1-202ENST00000467182 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
COL4A1-202ENST00000467182 ZMYM1Q5SVZ6 1142 aa15.72■□□□□ 0.11
COL4A1-202ENST00000467182 TDRD7Q8NHU6 1098 aaKnown RBP15.72■□□□□ 0.11
COL4A1-202ENST00000467182 LSG1Q9H089 658 aaKnown RBP15.72■□□□□ 0.11
COL4A1-202ENST00000467182 UPF2Q9HAU5 1272 aaKnown RBP15.72■□□□□ 0.11
COL4A1-202ENST00000467182 IQSEC3Q9UPP2 1182 aaPredicted RBP15.72■□□□□ 0.11
COL4A1-202ENST00000467182 A0A0G2JLW4 131 aa15.71■□□□□ 0.11
COL4A1-202ENST00000467182 EPB41L2O43491 1005 aaKnown RBP15.71■□□□□ 0.11
COL4A1-202ENST00000467182 REC8O95072 547 aa15.71■□□□□ 0.11
COL4A1-202ENST00000467182 TGFB2P61812 414 aa15.71■□□□□ 0.11
COL4A1-202ENST00000467182 MPNDQ8N594 471 aa15.71■□□□□ 0.11
COL4A1-202ENST00000467182 RUFY2Q8WXA3 655 aa15.71■□□□□ 0.11
COL4A1-202ENST00000467182 GNL3LQ9NVN8 582 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms