RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 KCNK4Q9NYG8 393 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 PDGFAP04085 211 aa8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 PCSK2P16519 638 aa8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 FSTP19883 344 aa8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 SSFA2P28290 1259 aa8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 FAM117BQ6P1L5 589 aa8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 GGNBP2Q9H3C7 697 aa8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 SH2B1Q9NRF2 756 aaPredicted RBP8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 KANSL3Q9P2N6 904 aa8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.99□□□□□ -0.97
PRPF40A-205ENST00000467114 NFKBIEO00221 500 aa8.98□□□□□ -0.97
PRPF40A-205ENST00000467114 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-205ENST00000467114 MZF1P28698 734 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-205ENST00000467114 DNM1Q05193 864 aaKnown RBP8.98□□□□□ -0.97
PRPF40A-205ENST00000467114 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
PRPF40A-205ENST00000467114 GTF3C2Q8WUA4 911 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-205ENST00000467114 CARD10Q9BWT7 1032 aa8.98□□□□□ -0.97
PRPF40A-205ENST00000467114 SUPT5HO00267 1087 aaKnown RBP8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 MPSTP25325 297 aa8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 CDC25BP30305 580 aa8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 EIF1AXP47813 144 aaKnown RBP8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 KIAA1211Q6ZU35 1233 aa8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 ACAD11Q709F0 780 aa8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 CEP41Q9BYV8 373 aa8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 RAXQ9Y2V3 346 aa8.97□□□□□ -0.97
PRPF40A-205ENST00000467114 NPR3P17342 541 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 CES1P23141 567 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 ALKBH2Q6NS38 261 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 CCDC82Q8N4S0 544 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 WNT8BQ93098 351 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 PMEPA1Q969W9 287 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 DZANK1Q9NVP4 752 aa8.96□□□□□ -0.98
PRPF40A-205ENST00000467114 FAM177BA6PVY3 158 aa8.95□□□□□ -0.98
PRPF40A-205ENST00000467114 H3BRJ5 948 aa8.95□□□□□ -0.98
PRPF40A-205ENST00000467114 UVSSAQ2YD98 709 aa8.95□□□□□ -0.98
PRPF40A-205ENST00000467114 ARMC10Q8N2F6 343 aa8.95□□□□□ -0.98
PRPF40A-205ENST00000467114 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
PRPF40A-205ENST00000467114 CHRDQ9H2X0 955 aa8.95□□□□□ -0.98
PRPF40A-205ENST00000467114 A6NHS1 94 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 ADAM11O75078 769 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 ACPPP15309 386 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 PIP4K2BP78356 416 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 DUOXA2Q1HG44 320 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 C8orf34Q49A92 452 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 TTC16Q8NEE8 873 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 KLHDC7BQ96G42 594 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 FAM46AQ96IP4 442 aaKnown RBP8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 OSGEPQ9NPF4 335 aa8.94□□□□□ -0.98
PRPF40A-205ENST00000467114 PDE2AO00408 941 aaPredicted RBP8.93□□□□□ -0.98
PRPF40A-205ENST00000467114 GSC2O15499 205 aa8.93□□□□□ -0.98
PRPF40A-205ENST00000467114 DDX3YO15523 660 aaKnown RBP8.93□□□□□ -0.98
PRPF40A-205ENST00000467114 DHX15O43143 795 aaKnown RBP8.93□□□□□ -0.98
PRPF40A-205ENST00000467114 CABP4P57796 275 aa8.93□□□□□ -0.98
PRPF40A-205ENST00000467114 STOML1Q9UBI4 398 aa8.93□□□□□ -0.98
PRPF40A-205ENST00000467114 POLIQ9UNA4 740 aa8.93□□□□□ -0.98
PRPF40A-205ENST00000467114 MTMR3Q13615 1198 aa8.92□□□□□ -0.98
PRPF40A-205ENST00000467114 TMEM102Q8N9M5 508 aaPredicted RBP8.92□□□□□ -0.98
PRPF40A-205ENST00000467114 UBASH3BQ8TF42 649 aa8.92□□□□□ -0.98
PRPF40A-205ENST00000467114 SOX13Q9UN79 622 aa8.92□□□□□ -0.98
PRPF40A-205ENST00000467114 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
PRPF40A-205ENST00000467114 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
PRPF40A-205ENST00000467114 HHIPQ96QV1 700 aa8.91□□□□□ -0.98
PRPF40A-205ENST00000467114 TRPA1O75762 1119 aa8.9□□□□□ -0.98
PRPF40A-205ENST00000467114 FAM13AO94988 1023 aa8.9□□□□□ -0.98
PRPF40A-205ENST00000467114 CD97P48960 835 aa8.9□□□□□ -0.98
PRPF40A-205ENST00000467114 UTP4Q969X6 686 aaKnown RBP8.9□□□□□ -0.98
PRPF40A-205ENST00000467114 NXPE3Q969Y0 559 aa8.9□□□□□ -0.98
PRPF40A-205ENST00000467114 MYRFLQ96LU7 910 aa8.9□□□□□ -0.98
PRPF40A-205ENST00000467114 TNFRSF21O75509 655 aa8.89□□□□□ -0.99
PRPF40A-205ENST00000467114 USP5P45974 858 aa8.89□□□□□ -0.99
PRPF40A-205ENST00000467114 EHHADHQ08426 723 aa8.89□□□□□ -0.99
PRPF40A-205ENST00000467114 KRTAP9-2Q9BYQ4 174 aa8.89□□□□□ -0.99
PRPF40A-205ENST00000467114 EREGO14944 169 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 SF3B2Q13435 895 aaKnown RBP8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 ANKRD34AQ69YU3 496 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 SNX29Q8TEQ0 813 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 OSMRQ99650 979 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 ZKSCAN3Q9BRR0 538 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 RNF208Q9H0X6 261 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 PCMTD2Q9NV79 361 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 MTMR7Q9Y216 660 aa8.88□□□□□ -0.99
PRPF40A-205ENST00000467114 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 FZD6O60353 706 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 PHACTR2O75167 634 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 EDN3P14138 238 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 FKBP4Q02790 459 aaKnown RBP eCLIP8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 NFIAQ12857 509 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 AAMPQ13685 434 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 FAM20CQ8IXL6 584 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 SLC7A3Q8WY07 619 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 BSNDQ8WZ55 320 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 C7orf69Q9H7B7 122 aa8.87□□□□□ -0.99
PRPF40A-205ENST00000467114 SSTR4P31391 388 aa8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 ARL4DP49703 201 aa8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 NLRP12P59046 1061 aa8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 C19orf57Q0VDD7 668 aa8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 HGSNATQ68CP4 663 aa8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.86□□□□□ -0.99
PRPF40A-205ENST00000467114 VN1R5Q7Z5H4 357 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms