RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CASP8AP2Q9UKL3 1982 aa24.43■■□□□ 1.5
COL9A3-206ENST00000466532 AKAP11Q9UKA4 1901 aa24.43■■□□□ 1.5
COL9A3-206ENST00000466532 ITGA6P23229 1130 aa24.43■■□□□ 1.5
COL9A3-206ENST00000466532 FAM161AQ3B820 660 aa24.43■■□□□ 1.5
COL9A3-206ENST00000466532 SULF1Q8IWU6 871 aa24.43■■□□□ 1.5
COL9A3-206ENST00000466532 GBA2Q9HCG7 927 aaPredicted RBP24.43■■□□□ 1.5
COL9A3-206ENST00000466532 USP17L8P0C7I0 530 aa24.42■■□□□ 1.5
COL9A3-206ENST00000466532 FAM9BQ8IZU0 186 aa24.42■■□□□ 1.5
COL9A3-206ENST00000466532 C2orf69Q8N8R5 385 aa24.42■■□□□ 1.5
COL9A3-206ENST00000466532 GMLQ99445 158 aa24.42■■□□□ 1.5
COL9A3-206ENST00000466532 SPINK5Q9NQ38 1064 aaPredicted RBP24.42■■□□□ 1.5
COL9A3-206ENST00000466532 TSKSQ9UJT2 592 aa24.42■■□□□ 1.5
COL9A3-206ENST00000466532 CSF1RP07333 972 aa24.41■■□□□ 1.5
COL9A3-206ENST00000466532 BRPF1P55201 1214 aaPredicted RBP24.41■■□□□ 1.5
COL9A3-206ENST00000466532 SCARF1Q14162 830 aa24.41■■□□□ 1.5
COL9A3-206ENST00000466532 MPHOSPH8Q99549 860 aa24.41■■□□□ 1.5
COL9A3-206ENST00000466532 MYOZ2Q9NPC6 264 aa24.41■■□□□ 1.5
COL9A3-206ENST00000466532 LEMD3Q9Y2U8 911 aa24.41■■□□□ 1.5
COL9A3-206ENST00000466532 NOGQ13253 232 aa24.4■■□□□ 1.5
COL9A3-206ENST00000466532 ANGEL2Q5VTE6 544 aaKnown RBP24.4■■□□□ 1.5
COL9A3-206ENST00000466532 ANKRD2Q9GZV1 360 aa24.4■■□□□ 1.5
COL9A3-206ENST00000466532 ZNF804BA4D1E1 1349 aa24.39■■□□□ 1.5
COL9A3-206ENST00000466532 F6X3S4 739 aa24.39■■□□□ 1.49
COL9A3-206ENST00000466532 RGMBQ6NW40 437 aa24.39■■□□□ 1.49
COL9A3-206ENST00000466532 TXNRD3Q86VQ6 643 aa24.39■■□□□ 1.49
COL9A3-206ENST00000466532 FBXW7Q969H0 707 aa24.39■■□□□ 1.49
COL9A3-206ENST00000466532 CDCA5Q96FF9 252 aa24.39■■□□□ 1.49
COL9A3-206ENST00000466532 COA1Q9GZY4 146 aa24.39■■□□□ 1.49
COL9A3-206ENST00000466532 CA12O43570 354 aa24.38■■□□□ 1.49
COL9A3-206ENST00000466532 DACT2Q5SW24 774 aa24.38■■□□□ 1.49
COL9A3-206ENST00000466532 ANKRD18BA2A2Z9 1011 aa24.37■■□□□ 1.49
COL9A3-206ENST00000466532 BEND3Q5T5X7 828 aa24.37■■□□□ 1.49
COL9A3-206ENST00000466532 ZIC5Q96T25 663 aa24.37■■□□□ 1.49
COL9A3-206ENST00000466532 MXD3Q9BW11 206 aa24.37■■□□□ 1.49
COL9A3-206ENST00000466532 PAPPA2Q9BXP8 1791 aa24.37■■□□□ 1.49
COL9A3-206ENST00000466532 ECM29Q5VYK3 1845 aa24.36■■□□□ 1.49
COL9A3-206ENST00000466532 STRIP1Q5VSL9 837 aa24.36■■□□□ 1.49
COL9A3-206ENST00000466532 MYO3BQ8WXR4 1341 aa24.35■■□□□ 1.49
COL9A3-206ENST00000466532 PITPNM2Q9BZ72 1349 aa24.35■■□□□ 1.49
COL9A3-206ENST00000466532 FAM155AB1AL88 458 aaPredicted RBP24.35■■□□□ 1.49
COL9A3-206ENST00000466532 KLRK1P26718 216 aa24.35■■□□□ 1.49
COL9A3-206ENST00000466532 KCNJ4P48050 445 aa24.35■■□□□ 1.49
COL9A3-206ENST00000466532 FOXO4P98177 505 aa24.35■■□□□ 1.49
COL9A3-206ENST00000466532 CHRNDQ07001 517 aa24.35■■□□□ 1.49
COL9A3-206ENST00000466532 CHMP3Q9Y3E7 222 aa24.35■■□□□ 1.49
COL9A3-206ENST00000466532 ZNF157P51786 506 aaPredicted RBP24.34■■□□□ 1.49
COL9A3-206ENST00000466532 OGFOD1Q8N543 542 aa24.34■■□□□ 1.49
COL9A3-206ENST00000466532 CCDC102AQ96A19 550 aa24.34■■□□□ 1.49
COL9A3-206ENST00000466532 IFIT5Q13325 482 aaKnown RBP24.33■■□□□ 1.49
COL9A3-206ENST00000466532 NBPF9Q3BBW0 867 aa24.33■■□□□ 1.49
COL9A3-206ENST00000466532 ABHD8Q96I13 439 aa24.33■■□□□ 1.49
COL9A3-206ENST00000466532 TTLL5Q6EMB2 1281 aa24.32■■□□□ 1.48
COL9A3-206ENST00000466532 SCAF8Q9UPN6 1271 aaKnown RBP24.32■■□□□ 1.48
COL9A3-206ENST00000466532 GRM8O00222 908 aa24.31■■□□□ 1.48
COL9A3-206ENST00000466532 TAF5LO75529 589 aa24.3■■□□□ 1.48
COL9A3-206ENST00000466532 GTF2IP78347 998 aa24.3■■□□□ 1.48
COL9A3-206ENST00000466532 KIF23Q02241 960 aaPredicted RBP24.3■■□□□ 1.48
COL9A3-206ENST00000466532 LMBR1LQ6UX01 489 aa24.3■■□□□ 1.48
COL9A3-206ENST00000466532 HELBQ8NG08 1087 aaPredicted RBP24.3■■□□□ 1.48
COL9A3-206ENST00000466532 SNAP23O00161 211 aa24.29■■□□□ 1.48
COL9A3-206ENST00000466532 WNT10BO00744 389 aa24.29■■□□□ 1.48
COL9A3-206ENST00000466532 SLC10A3P09131 477 aa24.29■■□□□ 1.48
COL9A3-206ENST00000466532 FKBP1BP68106 108 aa24.29■■□□□ 1.48
COL9A3-206ENST00000466532 EPHA10Q5JZY3 1008 aa24.29■■□□□ 1.48
COL9A3-206ENST00000466532 SLC4A10Q6U841 1118 aa24.29■■□□□ 1.48
COL9A3-206ENST00000466532 CD209Q9NNX6 404 aa24.29■■□□□ 1.48
COL9A3-206ENST00000466532 C9orf78Q9NZ63 289 aaPredicted RBP24.29■■□□□ 1.48
COL9A3-206ENST00000466532 MMP14P50281 582 aa24.28■■□□□ 1.48
COL9A3-206ENST00000466532 CCDC57Q2TAC2 916 aa24.28■■□□□ 1.48
COL9A3-206ENST00000466532 KIAA0825Q8IV33 1275 aa24.28■■□□□ 1.48
COL9A3-206ENST00000466532 HDAC9Q9UKV0 1011 aa24.28■■□□□ 1.48
COL9A3-206ENST00000466532 IRS2Q9Y4H2 1338 aa24.28■■□□□ 1.48
COL9A3-206ENST00000466532 ALDH1L1O75891 902 aa24.27■■□□□ 1.48
COL9A3-206ENST00000466532 SASH1O94885 1247 aa24.27■■□□□ 1.48
COL9A3-206ENST00000466532 TAF7LQ5H9L4 462 aa24.27■■□□□ 1.48
COL9A3-206ENST00000466532 PRAMEF18Q5VWM3 479 aa24.27■■□□□ 1.48
COL9A3-206ENST00000466532 ZNF594Q96JF6 807 aaPredicted RBP24.27■■□□□ 1.48
COL9A3-206ENST00000466532 SRCIN1Q9C0H9 1055 aa24.27■■□□□ 1.48
COL9A3-206ENST00000466532 ZNF521Q96K83 1311 aa24.27■■□□□ 1.48
COL9A3-206ENST00000466532 C15orf52Q6ZUT6 534 aaKnown RBP24.26■■□□□ 1.47
COL9A3-206ENST00000466532 LDHAL6AQ6ZMR3 332 aa24.25■■□□□ 1.47
COL9A3-206ENST00000466532 MOB2Q70IA6 237 aa24.25■■□□□ 1.47
COL9A3-206ENST00000466532 RASAL3Q86YV0 1011 aa24.25■■□□□ 1.47
COL9A3-206ENST00000466532 SAGE1Q9NXZ1 904 aa24.25■■□□□ 1.47
COL9A3-206ENST00000466532 ZNF804AQ7Z570 1209 aa24.24■■□□□ 1.47
COL9A3-206ENST00000466532 CNNM1Q9NRU3 951 aa24.24■■□□□ 1.47
COL9A3-206ENST00000466532 ARAP2Q8WZ64 1704 aa24.24■■□□□ 1.47
COL9A3-206ENST00000466532 PLIN1O60240 522 aa24.23■■□□□ 1.47
COL9A3-206ENST00000466532 TTLL12Q14166 644 aaPredicted RBP24.23■■□□□ 1.47
COL9A3-206ENST00000466532 CSRNP1Q96S65 589 aa24.23■■□□□ 1.47
COL9A3-206ENST00000466532 UBE2Q2LH0YL09 131 aa24.22■■□□□ 1.47
COL9A3-206ENST00000466532 TRPA1O75762 1119 aa24.22■■□□□ 1.47
COL9A3-206ENST00000466532 IL1R1P14778 569 aa24.22■■□□□ 1.47
COL9A3-206ENST00000466532 NF2P35240 595 aa24.22■■□□□ 1.47
COL9A3-206ENST00000466532 APOBEC3FQ8IUX4 373 aaKnown RBP24.22■■□□□ 1.47
COL9A3-206ENST00000466532 MCOLN1Q9GZU1 580 aa24.22■■□□□ 1.47
COL9A3-206ENST00000466532 RNF186Q9NXI6 227 aa24.22■■□□□ 1.47
COL9A3-206ENST00000466532 CCDC85CA6NKD9 419 aa24.21■■□□□ 1.47
COL9A3-206ENST00000466532 CERS5Q8N5B7 392 aa24.21■■□□□ 1.47
COL9A3-206ENST00000466532 SUCLG2Q96I99 432 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms