RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 TNRC6CQ9HCJ0 1690 aaKnown RBP25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 ARID4AP29374 1257 aaPredicted RBP25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 DDIT3P35638 169 aa25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 CHRNDQ07001 517 aa25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 PRPF40BQ6NWY9 871 aaKnown RBP25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 HELLSQ9NRZ9 838 aa25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 BSDC1Q9NW68 430 aaPredicted RBP25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 ZAP70P43403 619 aa25.39■■□□□ 1.66
PPP1R3F-203ENST00000466508 KCNJ4P48050 445 aa25.39■■□□□ 1.66
PPP1R3F-203ENST00000466508 ZMYM1Q5SVZ6 1142 aa25.39■■□□□ 1.66
PPP1R3F-203ENST00000466508 SEC62Q99442 399 aaKnown RBP25.39■■□□□ 1.66
PPP1R3F-203ENST00000466508 UPF3BQ9BZI7 483 aaKnown RBP25.39■■□□□ 1.66
PPP1R3F-203ENST00000466508 RNF113AO15541 343 aaKnown RBP25.38■■□□□ 1.65
PPP1R3F-203ENST00000466508 UQCRFS1P1P0C7P4 283 aa25.38■■□□□ 1.65
PPP1R3F-203ENST00000466508 PHKA1P46020 1223 aa25.38■■□□□ 1.65
PPP1R3F-203ENST00000466508 CHMP5Q9NZZ3 219 aa25.38■■□□□ 1.65
PPP1R3F-203ENST00000466508 GYS1P13807 737 aa25.38■■□□□ 1.65
PPP1R3F-203ENST00000466508 PI16Q6UXB8 463 aa25.38■■□□□ 1.65
PPP1R3F-203ENST00000466508 MYO5AQ9Y4I1 1855 aaKnown RBP25.37■■□□□ 1.65
PPP1R3F-203ENST00000466508 NPHP1O15259 732 aa25.37■■□□□ 1.65
PPP1R3F-203ENST00000466508 ZKSCAN1P17029 563 aaPredicted RBP25.37■■□□□ 1.65
PPP1R3F-203ENST00000466508 CREB3L3Q68CJ9 461 aa25.37■■□□□ 1.65
PPP1R3F-203ENST00000466508 RGPD3A6NKT7 1758 aaPredicted RBP25.37■■□□□ 1.65
PPP1R3F-203ENST00000466508 RGPD4Q7Z3J3 1758 aa25.37■■□□□ 1.65
PPP1R3F-203ENST00000466508 ZFYP08048 801 aaPredicted RBP25.36■■□□□ 1.65
PPP1R3F-203ENST00000466508 SNAP23O00161 211 aa25.36■■□□□ 1.65
PPP1R3F-203ENST00000466508 RNF20Q5VTR2 975 aa25.36■■□□□ 1.65
PPP1R3F-203ENST00000466508 CCDC129Q6ZRS4 1044 aa25.36■■□□□ 1.65
PPP1R3F-203ENST00000466508 CNBD1Q8NA66 436 aa25.36■■□□□ 1.65
PPP1R3F-203ENST00000466508 CELF1Q92879 486 aaKnown RBP25.36■■□□□ 1.65
PPP1R3F-203ENST00000466508 TTF1Q15361 905 aaPredicted RBP25.35■■□□□ 1.65
PPP1R3F-203ENST00000466508 CCDC24Q8N4L8 307 aa25.35■■□□□ 1.65
PPP1R3F-203ENST00000466508 TM6SF1Q9BZW5 370 aa25.35■■□□□ 1.65
PPP1R3F-203ENST00000466508 CIZ1Q9ULV3 898 aaPredicted RBP25.35■■□□□ 1.65
PPP1R3F-203ENST00000466508 SLC27A2O14975 620 aa25.34■■□□□ 1.65
PPP1R3F-203ENST00000466508 NFKBIBQ15653 356 aa25.34■■□□□ 1.65
PPP1R3F-203ENST00000466508 HMG20BQ9P0W2 317 aa25.34■■□□□ 1.65
PPP1R3F-203ENST00000466508 PSDA5PKW4 1024 aaPredicted RBP25.34■■□□□ 1.65
PPP1R3F-203ENST00000466508 SLFNL1Q499Z3 407 aa25.34■■□□□ 1.65
PPP1R3F-203ENST00000466508 MAST3O60307 1309 aa25.34■■□□□ 1.65
PPP1R3F-203ENST00000466508 DOCK2Q92608 1830 aa25.34■■□□□ 1.65
PPP1R3F-203ENST00000466508 CYP2E1P05181 493 aaPredicted RBP25.33■■□□□ 1.65
PPP1R3F-203ENST00000466508 RPS8P62241 208 aaKnown RBP25.33■■□□□ 1.65
PPP1R3F-203ENST00000466508 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.33■■□□□ 1.65
PPP1R3F-203ENST00000466508 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
PPP1R3F-203ENST00000466508 CASTP20810 708 aaKnown RBP25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 TTC14Q96N46 770 aa25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 FOXD4L1Q9NU39 408 aa25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 U3KPZ7 1027 aaPredicted RBP25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 R3HDM1Q15032 1099 aaKnown RBP25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 ADCK5Q3MIX3 580 aa25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 TMX3Q96JJ7 454 aa25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 JAKMIP1Q96N16 626 aaKnown RBP25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 RPAP1Q9BWH6 1393 aaPredicted RBP25.32■■□□□ 1.64
PPP1R3F-203ENST00000466508 TM4SF1P30408 202 aa25.31■■□□□ 1.64
PPP1R3F-203ENST00000466508 UBE4AQ14139 1066 aa25.31■■□□□ 1.64
PPP1R3F-203ENST00000466508 PRR5LQ6MZQ0 368 aa25.31■■□□□ 1.64
PPP1R3F-203ENST00000466508 ZSWIM6Q9HCJ5 1215 aa25.31■■□□□ 1.64
PPP1R3F-203ENST00000466508 RASGRF1Q13972 1273 aa25.3■■□□□ 1.64
PPP1R3F-203ENST00000466508 TSGA10IPQ3SY00 556 aa25.3■■□□□ 1.64
PPP1R3F-203ENST00000466508 ZSCAN25Q6NSZ9 544 aa25.3■■□□□ 1.64
PPP1R3F-203ENST00000466508 SPATA5Q8NB90 893 aa25.3■■□□□ 1.64
PPP1R3F-203ENST00000466508 OSBP2Q969R2 916 aa25.3■■□□□ 1.64
PPP1R3F-203ENST00000466508 DSCC1Q9BVC3 393 aa25.3■■□□□ 1.64
PPP1R3F-203ENST00000466508 APPBP2Q92624 585 aa25.3■■□□□ 1.64
PPP1R3F-203ENST00000466508 SRCAPQ6ZRS2 3230 aa25.29■■□□□ 1.64
PPP1R3F-203ENST00000466508 M0R2C6 588 aa25.29■■□□□ 1.64
PPP1R3F-203ENST00000466508 BCAMP50895 628 aa25.29■■□□□ 1.64
PPP1R3F-203ENST00000466508 ZNF827Q17R98 1081 aa25.29■■□□□ 1.64
PPP1R3F-203ENST00000466508 AKT1S1Q96B36 256 aa25.29■■□□□ 1.64
PPP1R3F-203ENST00000466508 PIH1D3Q9NQM4 214 aaKnown RBP25.29■■□□□ 1.64
PPP1R3F-203ENST00000466508 TFCP2L1Q9NZI6 479 aa25.29■■□□□ 1.64
PPP1R3F-203ENST00000466508 PSMA5P28066 241 aa25.28■■□□□ 1.64
PPP1R3F-203ENST00000466508 WASHC4Q2M389 1173 aa25.28■■□□□ 1.64
PPP1R3F-203ENST00000466508 CYP46A1Q9Y6A2 500 aa25.28■■□□□ 1.64
PPP1R3F-203ENST00000466508 ZNF804BA4D1E1 1349 aa25.28■■□□□ 1.64
PPP1R3F-203ENST00000466508 SERPINB2P05120 415 aa25.28■■□□□ 1.64
PPP1R3F-203ENST00000466508 ADD2P35612 726 aa25.27■■□□□ 1.64
PPP1R3F-203ENST00000466508 ST5P78524 1137 aa25.27■■□□□ 1.64
PPP1R3F-203ENST00000466508 CUL4AQ13619 759 aa25.27■■□□□ 1.64
PPP1R3F-203ENST00000466508 VPS53Q5VIR6 699 aa25.27■■□□□ 1.64
PPP1R3F-203ENST00000466508 RUFY3Q7L099 469 aa25.27■■□□□ 1.64
PPP1R3F-203ENST00000466508 HSPD1P10809 573 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 KRT32Q14532 448 aa25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 ANKRD2Q9GZV1 360 aa25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 IDH1O75874 414 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 AK2P54819 239 aa25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 SLC9C2Q5TAH2 1124 aa25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 NOL8Q76FK4 1167 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 CWC22Q9HCG8 908 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 TAF6LQ9Y6J9 622 aa25.26■■□□□ 1.63
PPP1R3F-203ENST00000466508 FRAT2O75474 233 aaPredicted RBP25.25■■□□□ 1.63
PPP1R3F-203ENST00000466508 CPA1P15085 419 aa25.25■■□□□ 1.63
PPP1R3F-203ENST00000466508 DDR1Q08345 913 aa25.25■■□□□ 1.63
PPP1R3F-203ENST00000466508 UBE3CQ15386 1083 aa25.25■■□□□ 1.63
PPP1R3F-203ENST00000466508 POLRMTO00411 1230 aaKnown RBP25.24■■□□□ 1.63
PPP1R3F-203ENST00000466508 GRAPQ13588 217 aa25.24■■□□□ 1.63
PPP1R3F-203ENST00000466508 CRY2Q49AN0 593 aa25.24■■□□□ 1.63
PPP1R3F-203ENST00000466508 GRAPLQ8TC17 118 aaPredicted RBP25.24■■□□□ 1.63
PPP1R3F-203ENST00000466508 PUS7LQ9H0K6 701 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms