RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 SPATA31A5Q5VU36 1347 aa4.7□□□□□ -1.66
SORT1-202ENST00000466471 SPATA31A7Q8IWB4 1347 aa4.7□□□□□ -1.66
SORT1-202ENST00000466471 CCNB3Q8WWL7 1395 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 PTCD1O75127 700 aaKnown RBP4.69□□□□□ -1.66
SORT1-202ENST00000466471 GSK3AP49840 483 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 SEC13P55735 322 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 KCNMA1Q12791 1236 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 DPYDQ12882 1025 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 OCLNQ16625 522 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.69□□□□□ -1.664e-6■■■■■ 29.7
SORT1-202ENST00000466471 PPP1R26Q5T8A7 1209 aaPredicted RBP4.69□□□□□ -1.66
SORT1-202ENST00000466471 TRMT44Q8IYL2 757 aaKnown RBP4.69□□□□□ -1.66
SORT1-202ENST00000466471 FAM177A1Q8N128 213 aaPredicted RBP4.69□□□□□ -1.66
SORT1-202ENST00000466471 ZNF526Q8TF50 670 aaPredicted RBP4.69□□□□□ -1.66
SORT1-202ENST00000466471 ABHD8Q96I13 439 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 PITPNM2Q9BZ72 1349 aa4.69□□□□□ -1.66
SORT1-202ENST00000466471 PLSCR1O15162 318 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 SUZ12Q15022 739 aaKnown RBP4.68□□□□□ -1.66
SORT1-202ENST00000466471 ERFEQ4G0M1 354 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 RNF20Q5VTR2 975 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 RGL4Q8IZJ4 473 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 AGBL1Q96MI9 1066 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 COL25A1Q9BXS0 654 aaPredicted RBP4.68□□□□□ -1.66
SORT1-202ENST00000466471 ADAMTS8Q9UP79 889 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 TNS3Q68CZ2 1445 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 C10orf71Q711Q0 1435 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 SPATA31A3Q5VYP0 1347 aa4.68□□□□□ -1.66
SORT1-202ENST00000466471 ZNF644Q9H582 1327 aaPredicted RBP4.68□□□□□ -1.66
SORT1-202ENST00000466471 TUBGCP6Q96RT7 1819 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 CCDC144AA2RUR9 1427 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 DKK1O94907 266 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 RECKO95980 971 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 CLDN10P78369 228 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 RASSF7Q02833 373 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 RNFT1Q5M7Z0 435 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 GLYCTKQ8IVS8 523 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 DEPDC4Q8N2C3 294 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 VWA5B2Q8N398 1253 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 TMEM151AQ8N4L1 468 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 CCDC155Q8N6L0 562 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 CITED4Q96RK1 184 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 SLC52A1Q9NWF4 448 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 PGPEP1Q9NXJ5 209 aa4.67□□□□□ -1.66
SORT1-202ENST00000466471 TNRC6CQ9HCJ0 1690 aaKnown RBP4.67□□□□□ -1.66
SORT1-202ENST00000466471 LRPPRCP42704 1394 aaKnown RBP4.66□□□□□ -1.66
SORT1-202ENST00000466471 ERBINQ96RT1 1412 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 SZT2Q5T011 3432 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 H3BRB1 525 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 SCAMP3O14828 347 aaKnown RBP4.66□□□□□ -1.66
SORT1-202ENST00000466471 SPINT1O43278 529 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 GDF11O95390 407 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 NPR3P17342 541 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 NCLP19338 710 aaKnown RBP4.66□□□□□ -1.66
SORT1-202ENST00000466471 MAPK1P28482 360 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 CTSOP43234 321 aaPredicted RBP4.66□□□□□ -1.66
SORT1-202ENST00000466471 RELBQ01201 579 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 FKBP4Q02790 459 aaKnown RBP eCLIP4.66□□□□□ -1.66
SORT1-202ENST00000466471 FSTL1Q12841 308 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 Q6ZVU0 165 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.66□□□□□ -1.66
SORT1-202ENST00000466471 NLGN2Q8NFZ4 835 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 SPATA32Q96LK8 384 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 YTHDC1Q96MU7 727 aaKnown RBP4.66□□□□□ -1.66
SORT1-202ENST00000466471 KCTD15Q96SI1 283 aaPredicted RBP4.66□□□□□ -1.66
SORT1-202ENST00000466471 ARHGAP9Q9BRR9 750 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 TUT1Q9H6E5 874 aaKnown RBP4.66□□□□□ -1.66
SORT1-202ENST00000466471 PCDHB9Q9Y5E1 797 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 PXDNLA1KZ92 1463 aa4.66□□□□□ -1.66
SORT1-202ENST00000466471 LRRC37A3O60309 1634 aa4.65□□□□□ -1.66
SORT1-202ENST00000466471 ADAMTS7Q9UKP4 1686 aa4.65□□□□□ -1.66
SORT1-202ENST00000466471 ATP7BP35670 1465 aa4.65□□□□□ -1.66
SORT1-202ENST00000466471 CDC14CA4D256 554 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 ZBTB7BO15156 539 aaPredicted RBP4.65□□□□□ -1.67
SORT1-202ENST00000466471 MRPL58Q14197 206 aaKnown RBP4.65□□□□□ -1.67
SORT1-202ENST00000466471 SLC15A2Q16348 729 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 EAPPQ56P03 285 aaPredicted RBP4.65□□□□□ -1.67
SORT1-202ENST00000466471 ZBTB33Q86T24 672 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 WHAMMQ8TF30 809 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 ARMC5Q96C12 935 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 SLC10A4Q96EP9 437 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 INSM2Q96T92 566 aaPredicted RBP4.65□□□□□ -1.67
SORT1-202ENST00000466471 RBCK1Q9BYM8 510 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 ZNF395Q9H8N7 513 aaPredicted RBP4.65□□□□□ -1.67
SORT1-202ENST00000466471 CDV3Q9UKY7 258 aaKnown RBP4.65□□□□□ -1.67
SORT1-202ENST00000466471 DOLKQ9UPQ8 538 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 PKD1L3Q7Z443 1732 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 COL6A3P12111 3177 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 VIRMAQ69YN4 1812 aaKnown RBP4.65□□□□□ -1.67
SORT1-202ENST00000466471 METP08581 1390 aa4.65□□□□□ -1.67
SORT1-202ENST00000466471 OVOS2A0A0G2JMS6 1433 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 OVOS2A0A0J9YW53 1432 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 OVOS2Q6IE36 1432 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 ALS2Q96Q42 1657 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 FMN2Q9NZ56 1722 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 SLC35F4A4IF30 521 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 FOXN1O15353 648 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 FOXO3O43524 673 aa4.64□□□□□ -1.67
SORT1-202ENST00000466471 FAM13AO94988 1023 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms