RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 DDX54Q8TDD1 881 aaKnown RBP7.93□□□□□ -1.14
PSMB4-202ENST00000466425 TNPO1Q92973 898 aaKnown RBP7.93□□□□□ -1.14
PSMB4-202ENST00000466425 CDCA7Q9BWT1 371 aaPredicted RBP7.93□□□□□ -1.14
PSMB4-202ENST00000466425 STRN4Q9NRL3 753 aa7.93□□□□□ -1.14
PSMB4-202ENST00000466425 CWC25Q9NXE8 425 aaPredicted RBP7.93□□□□□ -1.14
PSMB4-202ENST00000466425 BRWD3Q6RI45 1802 aa7.93□□□□□ -1.14
PSMB4-202ENST00000466425 H7C1W4 665 aa7.92□□□□□ -1.14
PSMB4-202ENST00000466425 WIPF1O43516 503 aa7.92□□□□□ -1.14
PSMB4-202ENST00000466425 TRAK2O60296 914 aa7.92□□□□□ -1.14
PSMB4-202ENST00000466425 CD2BP2O95400 341 aaKnown RBP7.92□□□□□ -1.14
PSMB4-202ENST00000466425 PDIA4P13667 645 aaKnown RBP7.92□□□□□ -1.14
PSMB4-202ENST00000466425 ZKSCAN1P17029 563 aaPredicted RBP7.92□□□□□ -1.14
PSMB4-202ENST00000466425 PPP4CP60510 307 aa7.92□□□□□ -1.14
PSMB4-202ENST00000466425 ATG3Q9NT62 314 aa7.92□□□□□ -1.14
PSMB4-202ENST00000466425 PA2G4Q9UQ80 394 aaKnown RBP7.92□□□□□ -1.14
PSMB4-202ENST00000466425 PSMA5P28066 241 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 TRIM28Q13263 835 aaKnown RBP7.91□□□□□ -1.14
PSMB4-202ENST00000466425 CUL4AQ13619 759 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 LRRFIP1Q32MZ4 808 aaKnown RBP7.91□□□□□ -1.14
PSMB4-202ENST00000466425 HSP90AB3PQ58FF7 597 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 MEX3CQ5U5Q3 659 aaKnown RBP7.91□□□□□ -1.14
PSMB4-202ENST00000466425 RNF20Q5VTR2 975 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 KIF6Q6ZMV9 814 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 UBE3BQ7Z3V4 1068 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 UNC5CLQ8IV45 518 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 RBM46Q8TBY0 533 aaKnown RBP7.91□□□□□ -1.14
PSMB4-202ENST00000466425 KAZALD1Q96I82 304 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 TM6SF1Q9BZW5 370 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 LSG1Q9H089 658 aaKnown RBP7.91□□□□□ -1.14
PSMB4-202ENST00000466425 GPR108Q9NPR9 543 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 TSR3Q9UJK0 312 aaKnown RBP7.91□□□□□ -1.14
PSMB4-202ENST00000466425 RFX7Q2KHR2 1363 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 TNS2Q63HR2 1409 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 PKD1L3Q7Z443 1732 aa7.91□□□□□ -1.14
PSMB4-202ENST00000466425 PARP4Q9UKK3 1724 aaKnown RBP7.9□□□□□ -1.14
PSMB4-202ENST00000466425 GOLGA6L3A6NEY3 463 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 EXOC5O00471 708 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 PTCD1O75127 700 aaKnown RBP7.9□□□□□ -1.14
PSMB4-202ENST00000466425 SASH1O94885 1247 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 ATP5JP18859 108 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 IL15P40933 162 aaPredicted RBP7.9□□□□□ -1.14
PSMB4-202ENST00000466425 CWC27Q6UX04 472 aaKnown RBP7.9□□□□□ -1.14
PSMB4-202ENST00000466425 GPIHBP1Q8IV16 184 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 TTC13Q8NBP0 860 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 EAF2Q96CJ1 260 aaPredicted RBP7.9□□□□□ -1.14
PSMB4-202ENST00000466425 TMX3Q96JJ7 454 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 ZSCAN31Q96LW9 406 aaPredicted RBP7.9□□□□□ -1.14
PSMB4-202ENST00000466425 BTG4Q9NY30 223 aa7.9□□□□□ -1.14
PSMB4-202ENST00000466425 THRAP3Q9Y2W1 955 aaKnown RBP7.9□□□□□ -1.14
PSMB4-202ENST00000466425 SIPA1L3O60292 1781 aaPredicted RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 RGPD2P0DJD1 1756 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 DGAT1O75907 488 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 CIAO1O76071 339 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 MAP4K4O95819 1239 aaPredicted RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 KCNJ4P48050 445 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 RFX5P48382 616 aaPredicted RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 CASP7P55210 303 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 PTPN12Q05209 780 aaKnown RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 ANKRD1Q15327 319 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 TNNI3KQ59H18 835 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 ZNF772Q68DY9 489 aaPredicted RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 NBPF10Q6P3W6 841 aaKnown RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 LMBR1LQ6UX01 489 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 NBPF15Q8N660 670 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 KCNB2Q92953 911 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 AK7Q96M32 723 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 FSD1Q9BTV5 496 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 CCDC8Q9H0W5 538 aaPredicted RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 SIL1Q9H173 461 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 SH2B1Q9NRF2 756 aaPredicted RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 SNRKQ9NRH2 765 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 HMG20BQ9P0W2 317 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.89□□□□□ -1.15
PSMB4-202ENST00000466425 FPGT-TNNI3KV9GXZ4 949 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 SCN11AQ9UI33 1791 aa7.89□□□□□ -1.15
PSMB4-202ENST00000466425 CCDC171Q6TFL3 1326 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 NUTM2BA6NNL0 878 aaPredicted RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 NUTM2EB1AL46 878 aaPredicted RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 BAG4O95429 457 aaKnown RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 A1BGP04217 495 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 PCCAP05165 728 aaPredicted RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 CYP2E1P05181 493 aaPredicted RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 HSP90B1P14625 803 aaKnown RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 SSFA2P28290 1259 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 HIC1Q14526 733 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 KRT32Q14532 448 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 EPHA10Q5JZY3 1008 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 SWT1Q5T5J6 900 aaKnown RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 VPS53Q5VIR6 699 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 NUTM2AQ8IVF1 878 aaPredicted RBP7.88□□□□□ -1.15
PSMB4-202ENST00000466425 ISCA1Q9BUE6 129 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 LIMCH1Q9UPQ0 1083 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 AKAP2Q9Y2D5 859 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 CHMP3Q9Y3E7 222 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 SNX14Q9Y5W7 946 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 CYP46A1Q9Y6A2 500 aa7.88□□□□□ -1.15
PSMB4-202ENST00000466425 SLIT2O94813 1529 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 214.1 ms