RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 MPNDQ8N594 471 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 RTFDC1Q9BY42 306 aaPredicted RBP8.86□□□□□ -0.99
CLDN4-204ENST00000466411 HYPKQ9NX55 129 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 TRIM17Q9Y577 477 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 EYSQ5T1H1 3165 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 ANKRD36CQ5JPF3 1778 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 PRUNE2Q8WUY3 3088 aa8.86□□□□□ -0.99
CLDN4-204ENST00000466411 A0A1W2PPC1 479 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 YDJCA8MPS7 323 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 NPHP1O15259 732 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 PPIP5K2O43314 1243 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 COL9A1P20849 921 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 TWISTNBQ3B726 338 aaPredicted RBP8.85□□□□□ -0.99
CLDN4-204ENST00000466411 DUSP27Q5VZP5 1158 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 TPTE2Q6XPS3 522 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 KIF6Q6ZMV9 814 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 PDCD7Q8N8D1 485 aaKnown RBP8.85□□□□□ -0.99
CLDN4-204ENST00000466411 ZNF333Q96JL9 665 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 WDR70Q9NW82 654 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 MIS18AQ9NYP9 233 aa8.85□□□□□ -0.99
CLDN4-204ENST00000466411 ERVV-1B6SEH8 477 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 RAD17O75943 681 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 DDX58O95786 925 aaKnown RBP8.84□□□□□ -0.99
CLDN4-204ENST00000466411 A1BGP04217 495 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 SLFN5Q08AF3 891 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 HSP90AB3PQ58FF7 597 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLDN4-204ENST00000466411 MICALL2Q8IY33 904 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 DPF2Q92785 391 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 CRISPLD2Q9H0B8 497 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 MTMR10Q9NXD2 777 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 RAPGEFL1Q9UHV5 662 aa8.84□□□□□ -0.99
CLDN4-204ENST00000466411 SALL2Q9Y467 1007 aaPredicted RBP8.84□□□□□ -0.99
CLDN4-204ENST00000466411 RIC1Q4ADV7 1423 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 NUP98P52948 1817 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 H7C1D1 291 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 KCNQ3O43525 872 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 PRKCSHP14314 528 aaPredicted RBP8.83□□□□□ -1
CLDN4-204ENST00000466411 FKBP1BP68106 108 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 IRX5P78411 483 aaPredicted RBP8.83□□□□□ -1
CLDN4-204ENST00000466411 ALDH1L2Q3SY69 923 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 MOB2Q70IA6 237 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 UBE2Q1Q7Z7E8 422 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 CDCA5Q96FF9 252 aa8.83□□□□□ -1
CLDN4-204ENST00000466411 ASTN2O75129 1339 aaPredicted RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 WTIPA6NIX2 430 aaPredicted RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 HSP90B1P14625 803 aaKnown RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 PLA2G5P39877 138 aa8.82□□□□□ -1
CLDN4-204ENST00000466411 KIAA2012Q0VF49 1180 aa8.82□□□□□ -1
CLDN4-204ENST00000466411 TNIP1Q15025 636 aa8.82□□□□□ -1
CLDN4-204ENST00000466411 TBC1D10BQ4KMP7 808 aaPredicted RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 TRMT2AQ8IZ69 625 aaKnown RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 CRAMP1Q96RY5 1269 aa8.82□□□□□ -1
CLDN4-204ENST00000466411 BCL2L13Q9BXK5 485 aa8.82□□□□□ -1
CLDN4-204ENST00000466411 USP16Q9Y5T5 823 aa8.82□□□□□ -1
CLDN4-204ENST00000466411 ABCC12Q96J65 1359 aa8.82□□□□□ -1
CLDN4-204ENST00000466411 IBTKQ9P2D0 1353 aaPredicted RBP8.82□□□□□ -1
CLDN4-204ENST00000466411 KIF16BQ96L93 1317 aa8.81□□□□□ -1
CLDN4-204ENST00000466411 PRAMEF22A3QJZ6 481 aa8.81□□□□□ -1
CLDN4-204ENST00000466411 EIF2S2P20042 333 aaKnown RBP8.81□□□□□ -1
CLDN4-204ENST00000466411 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
CLDN4-204ENST00000466411 MFSD10Q14728 455 aa8.81□□□□□ -1
CLDN4-204ENST00000466411 IER5LQ5T953 404 aa8.81□□□□□ -1
CLDN4-204ENST00000466411 Q7L0L9 218 aa8.81□□□□□ -1
CLDN4-204ENST00000466411 DEFB123Q8N688 67 aa8.81□□□□□ -1
CLDN4-204ENST00000466411 DCPSQ96C86 337 aaKnown RBP8.81□□□□□ -1
CLDN4-204ENST00000466411 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
CLDN4-204ENST00000466411 PTPRCP08575 1304 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 ZNF609O15014 1411 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 C8orf58Q8NAV2 365 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 SHISA4Q96DD7 197 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 NYXQ9GZU5 481 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 CHPF2Q9P2E5 772 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 NIP7Q9Y221 180 aaKnown RBP eCLIP8.8□□□□□ -1
CLDN4-204ENST00000466411 LAMB1P07942 1786 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 MAP3K15Q6ZN16 1313 aa8.8□□□□□ -1
CLDN4-204ENST00000466411 UBE2Q2LH0YL09 131 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 PPEF1O14829 653 aaPredicted RBP8.79□□□□□ -1
CLDN4-204ENST00000466411 ZBTB7BO15156 539 aaPredicted RBP8.79□□□□□ -1
CLDN4-204ENST00000466411 MYL6BP14649 208 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 NEXNQ0ZGT2 675 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 PARP10Q53GL7 1025 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 ANKRD13DQ6ZTN6 518 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 C3orf67Q6ZVT6 689 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 PLBD2Q8NHP8 589 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 LARP6Q9BRS8 491 aaKnown RBP8.79□□□□□ -1
CLDN4-204ENST00000466411 ATP6V0A2Q9Y487 856 aa8.79□□□□□ -1
CLDN4-204ENST00000466411 LAMA2P24043 3122 aaKnown RBP8.79□□□□□ -1
CLDN4-204ENST00000466411 LAMB2P55268 1798 aa8.78□□□□□ -1
CLDN4-204ENST00000466411 NBPF26B4DH59 902 aa8.78□□□□□ -1
CLDN4-204ENST00000466411 PSMD14O00487 310 aa8.78□□□□□ -1
CLDN4-204ENST00000466411 TCERG1O14776 1098 aaKnown RBP8.78□□□□□ -1
CLDN4-204ENST00000466411 IPO8O15397 1037 aaKnown RBP8.78□□□□□ -1
CLDN4-204ENST00000466411 VAMP4O75379 141 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms