RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 SETDB2Q96T68 719 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 STK32BQ9NY57 414 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 TBC1D2BQ9UPU7 963 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 TNNQ9UQP3 1299 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 USP42Q9H9J4 1324 aaKnown RBP7.46□□□□□ -1.22
CHMP3-206ENST00000466032 ARFGEF2Q9Y6D5 1785 aa7.46□□□□□ -1.22
CHMP3-206ENST00000466032 EIF5BO60841 1220 aaKnown RBP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 GDF11O95390 407 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 CWF19L2Q2TBE0 894 aaKnown RBP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 RABL6Q3YEC7 729 aaPredicted RBP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 PTF1AQ7RTS3 328 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 SMC5Q8IY18 1101 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 SSH3Q8TE77 659 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 ARHGEF1Q92888 912 aaKnown RBP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 UTP14AQ9BVJ6 771 aaKnown RBP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 DCTPP1Q9H773 170 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 LRRC4BQ9NT99 713 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 TFCP2L1Q9NZI6 479 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 TRMT112Q9UI30 125 aaKnown RBP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 NIP7Q9Y221 180 aaKnown RBP eCLIP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 PCDHB15Q9Y5E8 787 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 LRRFIP2Q9Y608 721 aaKnown RBP7.45□□□□□ -1.22
CHMP3-206ENST00000466032 SH3TC1Q8TE82 1336 aa7.45□□□□□ -1.22
CHMP3-206ENST00000466032 NUP188Q5SRE5 1749 aa7.44□□□□□ -1.22
CHMP3-206ENST00000466032 TNS1Q9HBL0 1735 aaKnown RBP7.44□□□□□ -1.22
CHMP3-206ENST00000466032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.44□□□□□ -1.22
CHMP3-206ENST00000466032 RNF223E7ERA6 249 aa7.44□□□□□ -1.22
CHMP3-206ENST00000466032 PDE8AO60658 829 aa7.44□□□□□ -1.22
CHMP3-206ENST00000466032 NBPF7P0C2Y1 421 aaPredicted RBP7.44□□□□□ -1.22
CHMP3-206ENST00000466032 PIP4K2AP48426 406 aaPredicted RBP7.44□□□□□ -1.22
CHMP3-206ENST00000466032 VASPP50552 380 aaPredicted RBP7.44□□□□□ -1.22
CHMP3-206ENST00000466032 B4GALNT3Q6L9W6 998 aa7.44□□□□□ -1.22
CHMP3-206ENST00000466032 KDM2BQ8NHM5 1336 aa7.44□□□□□ -1.22
CHMP3-206ENST00000466032 MYH14Q7Z406 1995 aaKnown RBP7.44□□□□□ -1.22
CHMP3-206ENST00000466032 CARMIL3Q8ND23 1372 aa7.44□□□□□ -1.22
CHMP3-206ENST00000466032 ATP5J2-PTCD1G3V325 749 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 GTF2E1P29083 439 aaPredicted RBP7.43□□□□□ -1.22
CHMP3-206ENST00000466032 CASP7P55210 303 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 RASSF7Q02833 373 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 SLC15A2Q16348 729 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 HLFQ16534 295 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 SLC10A5Q5PT55 438 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 USPL1Q5W0Q7 1092 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 UBE3BQ7Z3V4 1068 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 SPOCK2Q92563 424 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 RNF25Q96BH1 459 aaPredicted RBP7.43□□□□□ -1.22
CHMP3-206ENST00000466032 RTN4Q9NQC3 1192 aaKnown RBP7.43□□□□□ -1.22
CHMP3-206ENST00000466032 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
CHMP3-206ENST00000466032 ANKRD36CQ5JPF3 1778 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 RIC1Q4ADV7 1423 aa7.43□□□□□ -1.22
CHMP3-206ENST00000466032 SCN7AQ01118 1682 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 BCORQ6W2J9 1755 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 IRS4O14654 1257 aaPredicted RBP7.42□□□□□ -1.22
CHMP3-206ENST00000466032 IGHA1P01876 353 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 CSF1RP07333 972 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 EN1Q05925 392 aaPredicted RBP7.42□□□□□ -1.22
CHMP3-206ENST00000466032 G3BP1Q13283 466 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHMP3-206ENST00000466032 CCDC57Q2TAC2 916 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 CCDC152Q4G0S7 254 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 LIAT1Q6ZQX7 453 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 NBPF5PQ86XG9 351 aaPredicted RBP7.42□□□□□ -1.22
CHMP3-206ENST00000466032 KIF1BPQ96EK5 621 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 TRIM47Q96LD4 638 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 NLRP3Q96P20 1036 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 BICC1Q9H694 974 aaKnown RBP7.42□□□□□ -1.22
CHMP3-206ENST00000466032 COPRSQ9NQ92 184 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 NUP98P52948 1817 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 RTL9Q8NET4 1388 aa7.42□□□□□ -1.22
CHMP3-206ENST00000466032 QSER1Q2KHR3 1735 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 AFDNP55196 1824 aaKnown RBP7.41□□□□□ -1.22
CHMP3-206ENST00000466032 UBR3Q6ZT12 1888 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 NPHP1O15259 732 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 CIAO1O76071 339 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 NTSR2O95665 410 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 IGHDP01880 384 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 GYS1P13807 737 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 GPTP24298 496 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 ST5P78524 1137 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 NUCB1Q02818 461 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 IFIT5Q13325 482 aaKnown RBP7.41□□□□□ -1.22
CHMP3-206ENST00000466032 SF3B3Q15393 1217 aaKnown RBP7.41□□□□□ -1.22
CHMP3-206ENST00000466032 EZH2Q15910 746 aaKnown RBP7.41□□□□□ -1.22
CHMP3-206ENST00000466032 CHD1LQ86WJ1 897 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 SUCLG2Q96I99 432 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 CDC5LQ99459 802 aaKnown RBP7.41□□□□□ -1.22
CHMP3-206ENST00000466032 LRRCC1Q9C099 1032 aa7.41□□□□□ -1.22
CHMP3-206ENST00000466032 ANKRD18BA2A2Z9 1011 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 SURF6O75683 361 aaKnown RBP7.4□□□□□ -1.22
CHMP3-206ENST00000466032 PHF14O94880 888 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 TM4SF1P30408 202 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 IL15P40933 162 aaPredicted RBP7.4□□□□□ -1.22
CHMP3-206ENST00000466032 CTSWP56202 376 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 KCNQ4P56696 695 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 FOXO4P98177 505 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 OS9Q13438 667 aaPredicted RBP7.4□□□□□ -1.22
CHMP3-206ENST00000466032 TAF7LQ5H9L4 462 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 ANKRD45Q5TZF3 282 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 SUSD4Q5VX71 490 aa7.4□□□□□ -1.22
CHMP3-206ENST00000466032 TBC1D9BQ66K14 1250 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 1249.4 ms