RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 DUSP27Q5VZP5 1158 aa11□□□□□ -0.65
DDR1-242ENST00000465966 CCDC191Q8NCU4 936 aa11□□□□□ -0.65
DDR1-242ENST00000465966 FBXW7Q969H0 707 aa11□□□□□ -0.65
DDR1-242ENST00000465966 CDC5LQ99459 802 aaKnown RBP11□□□□□ -0.65
DDR1-242ENST00000465966 MYD88Q99836 296 aa11□□□□□ -0.65
DDR1-242ENST00000465966 CFHR5Q9BXR6 569 aa11□□□□□ -0.65
DDR1-242ENST00000465966 SCAF8Q9UPN6 1271 aaKnown RBP11□□□□□ -0.65
DDR1-242ENST00000465966 MYO3BQ8WXR4 1341 aa11□□□□□ -0.65
DDR1-242ENST00000465966 LRRC37AA6NMS7 1700 aa11□□□□□ -0.65
DDR1-242ENST00000465966 INHBEP58166 350 aa10.99□□□□□ -0.65
DDR1-242ENST00000465966 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
DDR1-242ENST00000465966 CCDC85AQ96PX6 553 aaPredicted RBP10.99□□□□□ -0.65
DDR1-242ENST00000465966 CHMP4AQ9BY43 222 aa10.99□□□□□ -0.65
DDR1-242ENST00000465966 CWC25Q9NXE8 425 aaPredicted RBP10.99□□□□□ -0.65
DDR1-242ENST00000465966 PAPPA2Q9BXP8 1791 aa10.98□□□□□ -0.65
DDR1-242ENST00000465966 WNT10BO00744 389 aa10.98□□□□□ -0.65
DDR1-242ENST00000465966 DDX58O95786 925 aaKnown RBP10.98□□□□□ -0.65
DDR1-242ENST00000465966 PTPN12Q05209 780 aaKnown RBP10.98□□□□□ -0.65
DDR1-242ENST00000465966 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
DDR1-242ENST00000465966 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
DDR1-242ENST00000465966 STRIP1Q5VSL9 837 aa10.98□□□□□ -0.65
DDR1-242ENST00000465966 APOBEC3FQ8IUX4 373 aaKnown RBP10.98□□□□□ -0.65
DDR1-242ENST00000465966 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
DDR1-242ENST00000465966 COA1Q9GZY4 146 aa10.98□□□□□ -0.65
DDR1-242ENST00000465966 LAMB2P55268 1798 aa10.98□□□□□ -0.65
DDR1-242ENST00000465966 MANSC4A6NHS7 340 aaPredicted RBP10.97□□□□□ -0.65
DDR1-242ENST00000465966 PRKG1Q13976 671 aa10.97□□□□□ -0.65
DDR1-242ENST00000465966 DACT2Q5SW24 774 aa10.97□□□□□ -0.65
DDR1-242ENST00000465966 SPRYD7Q5W111 196 aa10.97□□□□□ -0.65
DDR1-242ENST00000465966 SLC10A4Q96EP9 437 aa10.97□□□□□ -0.65
DDR1-242ENST00000465966 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
DDR1-242ENST00000465966 BSDC1Q9NW68 430 aaPredicted RBP10.97□□□□□ -0.65
DDR1-242ENST00000465966 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
DDR1-242ENST00000465966 TNRC18O15417 2968 aaPredicted RBP10.96□□□□□ -0.65
DDR1-242ENST00000465966 PDE4DIPQ5VU43 2346 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 MED23Q9ULK4 1368 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 HABP4Q5JVS0 413 aaKnown RBP10.96□□□□□ -0.65
DDR1-242ENST00000465966 LDLRAD1Q5T700 205 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.65
DDR1-242ENST00000465966 METTL22Q9BUU2 404 aaPredicted RBP10.96□□□□□ -0.65
DDR1-242ENST00000465966 PHAXQ9H814 394 aaKnown RBP10.96□□□□□ -0.65
DDR1-242ENST00000465966 MBIPQ9NS73 344 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 ANGEL1Q9UNK9 670 aaKnown RBP10.96□□□□□ -0.65
DDR1-242ENST00000465966 MINPP1Q9UNW1 487 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 TRIM17Q9Y577 477 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 GTF3C3Q9Y5Q9 886 aa10.96□□□□□ -0.65
DDR1-242ENST00000465966 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
DDR1-242ENST00000465966 PPP1R12BO60237 982 aaPredicted RBP10.95□□□□□ -0.66
DDR1-242ENST00000465966 SASH1O94885 1247 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 CCT4P50991 539 aaKnown RBP10.95□□□□□ -0.66
DDR1-242ENST00000465966 CTSWP56202 376 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 CALD1Q05682 793 aaKnown RBP10.95□□□□□ -0.66
DDR1-242ENST00000465966 SLFN5Q08AF3 891 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 IFNL1Q8IU54 200 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 TRMT2AQ8IZ69 625 aaKnown RBP10.95□□□□□ -0.66
DDR1-242ENST00000465966 ERO1AQ96HE7 468 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 MXD3Q9BW11 206 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 R3HDMLQ9H3Y0 253 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 LEMD3Q9Y2U8 911 aa10.95□□□□□ -0.66
DDR1-242ENST00000465966 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
DDR1-242ENST00000465966 UNCXA6NJT0 531 aa10.94□□□□□ -0.66
DDR1-242ENST00000465966 ELL2O00472 640 aaPredicted RBP10.94□□□□□ -0.66
DDR1-242ENST00000465966 ZBTB48P10074 688 aaPredicted RBP10.94□□□□□ -0.66
DDR1-242ENST00000465966 IGHMBP2P38935 993 aaKnown RBP10.94□□□□□ -0.66
DDR1-242ENST00000465966 NEXNQ0ZGT2 675 aa10.94□□□□□ -0.66
DDR1-242ENST00000465966 CCDC30Q5VVM6 783 aa10.94□□□□□ -0.66
DDR1-242ENST00000465966 OTOP1Q7RTM1 612 aa10.94□□□□□ -0.66
DDR1-242ENST00000465966 ANKRD2Q9GZV1 360 aa10.94□□□□□ -0.66
DDR1-242ENST00000465966 DEFB129Q9H1M3 183 aa10.94□□□□□ -0.66
DDR1-242ENST00000465966 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
DDR1-242ENST00000465966 TAF1P21675 1872 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 COL4A1P02462 1669 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 E9PSI1 815 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 MYO1BO43795 1136 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 KCNJ4P48050 445 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 GNAI1P63096 354 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 DLGAP5Q15398 846 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 SUPT20HL1Q3ZLR7 823 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 KIAA0825Q8IV33 1275 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 TTLL11Q8NHH1 800 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 GREM2Q9H772 168 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 IFT57Q9NWB7 429 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 MAP3K2Q9Y2U5 619 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 PPP2R3BQ9Y5P8 575 aa10.93□□□□□ -0.66
DDR1-242ENST00000465966 ZNF804BA4D1E1 1349 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 POTEFA5A3E0 1075 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 WTIPA6NIX2 430 aaPredicted RBP10.92□□□□□ -0.66
DDR1-242ENST00000465966 GTF2IP78347 998 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 ARHGEF6Q15052 776 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 MAP3K11Q16584 847 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 KSR2Q6VAB6 950 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 PTPN22Q9Y2R2 807 aa10.92□□□□□ -0.66
DDR1-242ENST00000465966 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
DDR1-242ENST00000465966 IL16Q14005 1332 aa10.91□□□□□ -0.66
DDR1-242ENST00000465966 ZNF853P0CG23 659 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms