RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ARHGAP29Q52LW3 1261 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 DHX32Q7L7V1 743 aaKnown RBP22.96■■□□□ 1.27
SDF4-205ENST00000465727 DNAJC2Q99543 621 aaKnown RBP22.96■■□□□ 1.27
SDF4-205ENST00000465727 AGXT2Q9BYV1 514 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 FTOQ9C0B1 505 aaKnown RBP eCLIP22.96■■□□□ 1.273e-7■■□□□ 11.7
SDF4-205ENST00000465727 XPO4Q9C0E2 1151 aaKnown RBP22.96■■□□□ 1.27
SDF4-205ENST00000465727 ST7Q9NRC1 585 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 KIAA1468Q9P260 1216 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 HEG1Q9ULI3 1381 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 TMCO3Q6UWJ1 677 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 TMC6Q7Z403 805 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 RTEL1Q9NZ71 1219 aa22.96■■□□□ 1.27
SDF4-205ENST00000465727 SETD1BQ9UPS6 1966 aaKnown RBP22.95■■□□□ 1.26
SDF4-205ENST00000465727 SMC2O95347 1197 aa22.95■■□□□ 1.26
SDF4-205ENST00000465727 MCMDC2Q4G0Z9 681 aa22.95■■□□□ 1.26
SDF4-205ENST00000465727 UBXN4Q92575 508 aa22.95■■□□□ 1.26
SDF4-205ENST00000465727 CTDNEP1O95476 244 aa22.94■■□□□ 1.26
SDF4-205ENST00000465727 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
SDF4-205ENST00000465727 IFNKQ9P0W0 207 aa22.94■■□□□ 1.26
SDF4-205ENST00000465727 ZNF609O15014 1411 aa22.94■■□□□ 1.26
SDF4-205ENST00000465727 NPHP1O15259 732 aa22.94■■□□□ 1.26
SDF4-205ENST00000465727 ORC3Q9UBD5 711 aaPredicted RBP22.94■■□□□ 1.26
SDF4-205ENST00000465727 PCDHA7Q9UN72 937 aa22.94■■□□□ 1.26
SDF4-205ENST00000465727 TICAM2Q86XR7 235 aa22.93■■□□□ 1.26
SDF4-205ENST00000465727 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.93■■□□□ 1.26
SDF4-205ENST00000465727 PLA2G4AP47712 749 aa22.93■■□□□ 1.26
SDF4-205ENST00000465727 DPCR1Q3MIW9 517 aa22.93■■□□□ 1.26
SDF4-205ENST00000465727 HOMER1Q86YM7 354 aa22.93■■□□□ 1.26
SDF4-205ENST00000465727 KCNG4Q8TDN1 519 aa22.93■■□□□ 1.26
SDF4-205ENST00000465727 SIL1Q9H173 461 aa22.93■■□□□ 1.26
SDF4-205ENST00000465727 EFCAB8A8MWE9 144 aa22.92■■□□□ 1.26
SDF4-205ENST00000465727 PROSER3Q2NL68 480 aa22.92■■□□□ 1.26
SDF4-205ENST00000465727 SH3TC1Q8TE82 1336 aa22.92■■□□□ 1.26
SDF4-205ENST00000465727 A0A087WWV3 80 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 IKBKBO14920 756 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 NLRP12P59046 1061 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 FCHSD1Q86WN1 690 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 IP6K1Q92551 441 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 ZNF274Q96GC6 653 aaPredicted RBP22.91■■□□□ 1.26
SDF4-205ENST00000465727 AMOTL2Q9Y2J4 779 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 YEATS4O95619 227 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 ILDR1Q86SU0 546 aaPredicted RBP22.91■■□□□ 1.26
SDF4-205ENST00000465727 ABTB2Q8N961 1025 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 MNS1Q8NEH6 495 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 COPRSQ9NQ92 184 aa22.91■■□□□ 1.26
SDF4-205ENST00000465727 EXOSC10Q01780 885 aaKnown RBP22.9■■□□□ 1.26
SDF4-205ENST00000465727 PSME1Q06323 249 aa22.9■■□□□ 1.26
SDF4-205ENST00000465727 CCDC158Q5M9N0 1113 aa22.9■■□□□ 1.26
SDF4-205ENST00000465727 TXLNBQ8N3L3 684 aa22.9■■□□□ 1.26
SDF4-205ENST00000465727 DNAI1Q9UI46 699 aa22.9■■□□□ 1.26
SDF4-205ENST00000465727 LTKP29376 864 aa22.89■■□□□ 1.26
SDF4-205ENST00000465727 NDUFA8P51970 172 aa22.89■■□□□ 1.26
SDF4-205ENST00000465727 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.26
SDF4-205ENST00000465727 PLEKHO1Q53GL0 409 aaPredicted RBP22.89■■□□□ 1.26
SDF4-205ENST00000465727 ZNF530Q6P9A1 599 aaPredicted RBP22.89■■□□□ 1.26
SDF4-205ENST00000465727 STOX1Q6ZVD7 989 aa22.89■■□□□ 1.26
SDF4-205ENST00000465727 LINC00301Q8NCQ3 95 aa22.89■■□□□ 1.26
SDF4-205ENST00000465727 LRRN4CLQ8ND94 238 aa22.89■■□□□ 1.26
SDF4-205ENST00000465727 EDC3Q96F86 508 aaKnown RBP22.89■■□□□ 1.26
SDF4-205ENST00000465727 DDX21Q9NR30 783 aaKnown RBP eCLIP22.89■■□□□ 1.26
SDF4-205ENST00000465727 DBNLQ9UJU6 430 aaKnown RBP22.89■■□□□ 1.26
SDF4-205ENST00000465727 CARMIL3Q8ND23 1372 aa22.89■■□□□ 1.26
SDF4-205ENST00000465727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.89■■□□□ 1.25
SDF4-205ENST00000465727 ZBTB22O15209 634 aa22.89■■□□□ 1.25
SDF4-205ENST00000465727 LRRFIP1Q32MZ4 808 aaKnown RBP22.89■■□□□ 1.25
SDF4-205ENST00000465727 TNNI3KQ59H18 835 aa22.89■■□□□ 1.25
SDF4-205ENST00000465727 HAUS7Q99871 368 aa22.89■■□□□ 1.25
SDF4-205ENST00000465727 DSCC1Q9BVC3 393 aa22.89■■□□□ 1.25
SDF4-205ENST00000465727 LRRC2Q9BYS8 371 aa22.89■■□□□ 1.25
SDF4-205ENST00000465727 POLR3EQ9NVU0 708 aa22.89■■□□□ 1.25
SDF4-205ENST00000465727 FPGT-TNNI3KV9GXZ4 949 aa22.89■■□□□ 1.25
SDF4-205ENST00000465727 TADA3O75528 432 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 SLC3A2P08195 630 aaKnown RBP22.88■■□□□ 1.25
SDF4-205ENST00000465727 APOBRQ0VD83 1088 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 NBPF6Q5VWK0 638 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 NBPF4Q96M43 638 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 UBXN6Q9BZV1 441 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 NEDD4P46934 1319 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 A0A1B0GVL5 298 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 CBFA2T2O43439 604 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 HNRNPH2P55795 449 aaKnown RBP22.88■■□□□ 1.25
SDF4-205ENST00000465727 NCAPHQ15003 741 aa22.88■■□□□ 1.25
SDF4-205ENST00000465727 ERCC4Q92889 916 aaPredicted RBP22.88■■□□□ 1.25
SDF4-205ENST00000465727 PHRF1Q9P1Y6 1649 aaKnown RBP22.87■■□□□ 1.25
SDF4-205ENST00000465727 RNMTO43148 476 aaKnown RBP22.87■■□□□ 1.25
SDF4-205ENST00000465727 MYO1BO43795 1136 aa22.87■■□□□ 1.25
SDF4-205ENST00000465727 NEXNQ0ZGT2 675 aa22.87■■□□□ 1.25
SDF4-205ENST00000465727 SF3A1Q15459 793 aaKnown RBP22.87■■□□□ 1.25
SDF4-205ENST00000465727 MUM1L1Q5H9M0 696 aa22.87■■□□□ 1.25
SDF4-205ENST00000465727 TRIM65Q6PJ69 517 aa22.87■■□□□ 1.25
SDF4-205ENST00000465727 CCDC129Q6ZRS4 1044 aa22.87■■□□□ 1.25
SDF4-205ENST00000465727 FBXL16Q8N461 479 aa22.87■■□□□ 1.25
SDF4-205ENST00000465727 TMX1Q9H3N1 280 aa22.87■■□□□ 1.25
SDF4-205ENST00000465727 PALLDQ8WX93 1383 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 FANCCQ00597 558 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 STK38Q15208 465 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 FBXW7Q969H0 707 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 SIPA1L3O60292 1781 aaPredicted RBP22.86■■□□□ 1.25
SDF4-205ENST00000465727 ZSCAN12O43309 604 aa22.86■■□□□ 1.25
SDF4-205ENST00000465727 IGKV5-2P06315 115 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms