RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 FMR1Q06787 632 aaKnown RBP eCLIP8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 COL13A1Q5TAT6 717 aaPredicted RBP8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 DHX32Q7L7V1 743 aaKnown RBP8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 OR13H1Q8NG92 308 aa8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 SNX29Q8TEQ0 813 aa8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 GIPC2Q8TF65 315 aa8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 RNF19AQ9NV58 838 aa8.32□□□□□ -1.08
CACNA1C-223ENST00000465278 FRMPD1Q5SYB0 1578 aa8.31□□□□□ -1.08
CACNA1C-223ENST00000465278 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
CACNA1C-223ENST00000465278 ENOX2Q16206 610 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-223ENST00000465278 NSUN5Q96P11 429 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-223ENST00000465278 UBE2OQ9C0C9 1292 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-223ENST00000465278 DNAJB12Q9NXW2 375 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-223ENST00000465278 GGA1Q9UJY5 639 aa8.31□□□□□ -1.08
CACNA1C-223ENST00000465278 UHRF1BP1Q6BDS2 1440 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 RAPGEF6Q8TEU7 1601 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 MAP2K3P46734 347 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 PIP4K2BP78356 416 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 PLAURQ03405 335 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 FBXO33Q7Z6M2 555 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 EPS8L3Q8TE67 593 aaKnown RBP8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 PMEPA1Q969W9 287 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 CCDC74AQ96AQ1 378 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 EFCC1Q9HA90 598 aa8.3□□□□□ -1.08
CACNA1C-223ENST00000465278 CUX1P39880 1505 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 LOC102724428A0A0B4J2F2 783 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 SIN3BO75182 1162 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 ADAMTS2O95450 1211 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 ARAFP10398 606 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 ZNF16P17020 682 aaPredicted RBP8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 IRS1P35568 1242 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 SIK1P57059 783 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 SRSF11Q05519 484 aaKnown RBP8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 TREML4Q6UXN2 200 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 NCAPG2Q86XI2 1143 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 DNAJC25Q9H1X3 360 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 NCOA1Q15788 1441 aa8.29□□□□□ -1.08
CACNA1C-223ENST00000465278 TRPA1O75762 1119 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 ADH6P28332 368 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 RBM25P49756 843 aaKnown RBP8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 ATP2B2Q01814 1243 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 COL19A1Q14993 1142 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 ZNF326Q5BKZ1 582 aaKnown RBP8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 PI16Q6UXB8 463 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 FCHSD1Q86WN1 690 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 ACDQ96AP0 544 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 OXCT2Q9BYC2 517 aaPredicted RBP8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 LATS2Q9NRM7 1088 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 ZNF335Q9H4Z2 1342 aaPredicted RBP8.28□□□□□ -1.08
CACNA1C-223ENST00000465278 UHRF1BP1LA0JNW5 1464 aa8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 CPB1P15086 417 aa8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 ACPPP15309 386 aa8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 HYAL2Q12891 473 aa8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 C1orf229Q6ZS94 237 aaPredicted RBP8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 TRPM4Q8TD43 1214 aa8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 FAM161BQ96MY7 647 aa8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 ARID4BQ4LE39 1312 aaPredicted RBP8.27□□□□□ -1.09
CACNA1C-223ENST00000465278 ABCA10Q8WWZ4 1543 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 NRLP54845 237 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 FAM35AQ86V20 835 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 GALNT6Q8NCL4 622 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 NPHS2Q9NP85 383 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 AVENQ9NQS1 362 aaPredicted RBP8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 PARP2Q9UGN5 583 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
CACNA1C-223ENST00000465278 KDM5BQ9UGL1 1544 aa8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 TOM1O60784 492 aa8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 GADD45BO75293 160 aaPredicted RBP8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 ADH7P40394 386 aa8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 ALG1LQ6GMV1 187 aa8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 SPACA7Q96KW9 195 aa8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 NLRP2Q9NX02 1062 aa8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 FANCAO15360 1455 aa8.25□□□□□ -1.09
CACNA1C-223ENST00000465278 CD109Q6YHK3 1445 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 UNCXA6NJT0 531 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 PRPF40AO75400 957 aaKnown RBP8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 ALAS2P22557 587 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 SOX18P35713 384 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 GPLD1P80108 840 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 XPCQ01831 940 aaPredicted RBP8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 LYPD4Q6UWN0 246 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 GOLGA6L1Q8N7Z2 621 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 CEP120Q8N960 986 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 WHAMMQ8TF30 809 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 EDARADDQ8WWZ3 215 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 TNFRSF25Q93038 417 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 OSMRQ99650 979 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 SLC6A14Q9UN76 642 aa8.24□□□□□ -1.09
CACNA1C-223ENST00000465278 POGZQ7Z3K3 1410 aa8.23□□□□□ -1.09
CACNA1C-223ENST00000465278 ELOA3CA0A087WX78 387 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-223ENST00000465278 A0A1W2PP55 124 aa8.23□□□□□ -1.09
CACNA1C-223ENST00000465278 ELOA3DA6NLF2 546 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms