RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 RAB44Q7Z6P3 723 aaPredicted RBP9.19□□□□□ -0.94
NUP188-202ENST00000464729 ELOA3Q8NG57 546 aa9.19□□□□□ -0.94
NUP188-202ENST00000464729 TNFRSF25Q93038 417 aa9.19□□□□□ -0.94
NUP188-202ENST00000464729 DCAF5Q96JK2 942 aa9.19□□□□□ -0.94
NUP188-202ENST00000464729 MBD5Q9P267 1494 aa9.19□□□□□ -0.94
NUP188-202ENST00000464729 NEUROD1Q13562 356 aa9.18□□□□□ -0.94
NUP188-202ENST00000464729 LRRIQ1Q96JM4 1722 aa9.18□□□□□ -0.94
NUP188-202ENST00000464729 EID1Q9Y6B2 187 aa9.18□□□□□ -0.94
NUP188-202ENST00000464729 INO80Q9ULG1 1556 aaPredicted RBP9.17□□□□□ -0.94
NUP188-202ENST00000464729 MTUS2Q5JR59 1369 aa9.17□□□□□ -0.94
NUP188-202ENST00000464729 CCDC82Q8N4S0 544 aa9.17□□□□□ -0.94
NUP188-202ENST00000464729 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.17□□□□□ -0.94
NUP188-202ENST00000464729 LRFN2Q9ULH4 789 aa9.17□□□□□ -0.94
NUP188-202ENST00000464729 DEPDC5O75140 1603 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 GNB5O14775 395 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 KCNA6P17658 529 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 COL8A1P27658 744 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 GRNP28799 593 aaKnown RBP9.16□□□□□ -0.94
NUP188-202ENST00000464729 INPP5BP32019 993 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 IDH3AP50213 366 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 C11orf91Q3C1V1 193 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 CLP1Q92989 425 aaKnown RBP9.16□□□□□ -0.94
NUP188-202ENST00000464729 C1orf115Q9H7X2 142 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 CXXC1Q9P0U4 656 aaPredicted RBP9.16□□□□□ -0.94
NUP188-202ENST00000464729 POLR1AO95602 1720 aaPredicted RBP9.16□□□□□ -0.94
NUP188-202ENST00000464729 ADGBQ8N7X0 1667 aa9.16□□□□□ -0.94
NUP188-202ENST00000464729 PIK3R2O00459 728 aa9.15□□□□□ -0.94
NUP188-202ENST00000464729 ALAS2P22557 587 aa9.15□□□□□ -0.94
NUP188-202ENST00000464729 C14orf37Q86TY3 774 aa9.15□□□□□ -0.94
NUP188-202ENST00000464729 COL26A1Q96A83 441 aa9.15□□□□□ -0.94
NUP188-202ENST00000464729 EFCC1Q9HA90 598 aa9.15□□□□□ -0.94
NUP188-202ENST00000464729 EPB42P16452 691 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 ADH7P40394 386 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 COX20Q5RI15 118 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 ALYREFQ86V81 257 aaKnown RBP9.14□□□□□ -0.95
NUP188-202ENST00000464729 BHMTQ93088 406 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 GSX2Q9BZM3 304 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 SUV39H2Q9H5I1 410 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 SLAIN2Q9P270 581 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 KDM5DQ9BY66 1539 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 FYCO1Q9BQS8 1478 aa9.14□□□□□ -0.95
NUP188-202ENST00000464729 MICAL2O94851 1124 aa9.13□□□□□ -0.95
NUP188-202ENST00000464729 ARSDP51689 593 aa9.13□□□□□ -0.95
NUP188-202ENST00000464729 ZNF772Q68DY9 489 aaPredicted RBP9.13□□□□□ -0.95
NUP188-202ENST00000464729 STARD13Q9Y3M8 1113 aa9.13□□□□□ -0.95
NUP188-202ENST00000464729 IQGAP1P46940 1657 aa9.13□□□□□ -0.95
NUP188-202ENST00000464729 TMEM94Q12767 1356 aa9.12□□□□□ -0.95
NUP188-202ENST00000464729 STRCP1A6NGW2 1772 aa9.12□□□□□ -0.95
NUP188-202ENST00000464729 ITGB2P05107 769 aa9.12□□□□□ -0.95
NUP188-202ENST00000464729 CCINQ13939 588 aa9.12□□□□□ -0.95
NUP188-202ENST00000464729 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
NUP188-202ENST00000464729 IFT43Q96FT9 208 aa9.12□□□□□ -0.95
NUP188-202ENST00000464729 RNF17Q9BXT8 1623 aaKnown RBP9.12□□□□□ -0.95
NUP188-202ENST00000464729 SCAF11Q99590 1463 aaKnown RBP9.11□□□□□ -0.95
NUP188-202ENST00000464729 IGHA1P01876 353 aa9.11□□□□□ -0.95
NUP188-202ENST00000464729 GPAT2Q6NUI2 795 aa9.11□□□□□ -0.95
NUP188-202ENST00000464729 TRIM11Q96F44 468 aa9.11□□□□□ -0.95
NUP188-202ENST00000464729 SAP130Q9H0E3 1048 aa9.11□□□□□ -0.95
NUP188-202ENST00000464729 C11orf16Q9NQ32 467 aa9.11□□□□□ -0.95
NUP188-202ENST00000464729 NOP53Q9NZM5 478 aaKnown RBP9.11□□□□□ -0.95
NUP188-202ENST00000464729 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.11□□□□□ -0.95
NUP188-202ENST00000464729 JCADQ9P266 1359 aa9.11□□□□□ -0.95
NUP188-202ENST00000464729 KRBA1A5PL33 1030 aa9.1□□□□□ -0.95
NUP188-202ENST00000464729 OPLAHO14841 1288 aa9.1□□□□□ -0.95
NUP188-202ENST00000464729 RXRBP28702 533 aa9.1□□□□□ -0.95
NUP188-202ENST00000464729 C16orf46Q6P387 395 aa9.1□□□□□ -0.95
NUP188-202ENST00000464729 CAPN12Q6ZSI9 719 aa9.1□□□□□ -0.95
NUP188-202ENST00000464729 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
NUP188-202ENST00000464729 SYNMO15061 1565 aa9.09□□□□□ -0.95
NUP188-202ENST00000464729 ALBP02768 609 aa9.09□□□□□ -0.95
NUP188-202ENST00000464729 NFKB1P19838 968 aa9.09□□□□□ -0.95
NUP188-202ENST00000464729 MEX3CQ5U5Q3 659 aaKnown RBP9.09□□□□□ -0.95
NUP188-202ENST00000464729 TREML1Q86YW5 311 aa9.09□□□□□ -0.95
NUP188-202ENST00000464729 MKNK1Q9BUB5 465 aa9.09□□□□□ -0.95
NUP188-202ENST00000464729 PRDM6Q9NQX0 595 aa9.09□□□□□ -0.95
NUP188-202ENST00000464729 NCOA2Q15596 1464 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 CCDC141Q6ZP82 1450 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 ARHGAP23Q9P227 1491 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 SPATA31A6Q5VVP1 1343 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 M0R082 166 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 PTCD1O75127 700 aaKnown RBP9.08□□□□□ -0.96
NUP188-202ENST00000464729 PPP1R15AO75807 674 aaPredicted RBP9.08□□□□□ -0.96
NUP188-202ENST00000464729 COL9A3Q14050 684 aaPredicted RBP9.08□□□□□ -0.96
NUP188-202ENST00000464729 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 MICALL1Q8N3F8 863 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 ZNF417Q8TAU3 575 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 ZNF587Q96SQ5 575 aaPredicted RBP9.08□□□□□ -0.96
NUP188-202ENST00000464729 UBE2OQ9C0C9 1292 aaKnown RBP9.08□□□□□ -0.96
NUP188-202ENST00000464729 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 RTCBQ9Y3I0 505 aaKnown RBP9.08□□□□□ -0.96
NUP188-202ENST00000464729 TMEM2Q9UHN6 1383 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
NUP188-202ENST00000464729 CEP162Q5TB80 1403 aa9.07□□□□□ -0.96
NUP188-202ENST00000464729 TNFRSF10BO14763 440 aa9.07□□□□□ -0.96
NUP188-202ENST00000464729 MAP3K6O95382 1288 aa9.07□□□□□ -0.96
NUP188-202ENST00000464729 ATP2B4P23634 1241 aa9.07□□□□□ -0.96
NUP188-202ENST00000464729 IDI1Q13907 227 aa9.07□□□□□ -0.96
NUP188-202ENST00000464729 ETFBKMTQ8IXQ9 262 aa9.07□□□□□ -0.96
NUP188-202ENST00000464729 DNAJB12Q9NXW2 375 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms