RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 TMEM88BA6NKF7 163 aa27.86■■■□□ 2.05
UBA3-206ENST00000464605 RPS12P25398 132 aaKnown RBP27.86■■■□□ 2.05
UBA3-206ENST00000464605 TAF7LQ5H9L4 462 aa27.86■■■□□ 2.05
UBA3-206ENST00000464605 MICALL2Q8IY33 904 aa27.86■■■□□ 2.05
UBA3-206ENST00000464605 CNTNAP1P78357 1384 aa27.86■■■□□ 2.05
UBA3-206ENST00000464605 ZNF609O15014 1411 aa27.85■■■□□ 2.05
UBA3-206ENST00000464605 HSPA1AP0DMV8 641 aaKnown RBP27.85■■■□□ 2.05
UBA3-206ENST00000464605 HSPA1BP0DMV9 641 aaKnown RBP27.85■■■□□ 2.05
UBA3-206ENST00000464605 TRIM27P14373 513 aa27.85■■■□□ 2.05
UBA3-206ENST00000464605 COL13A1Q5TAT6 717 aaPredicted RBP27.85■■■□□ 2.05
UBA3-206ENST00000464605 TRPM4Q8TD43 1214 aa27.85■■■□□ 2.05
UBA3-206ENST00000464605 PGAP2Q9UHJ9 254 aa27.85■■■□□ 2.05
UBA3-206ENST00000464605 RIPOR2Q9Y4F9 1068 aa27.85■■■□□ 2.05
UBA3-206ENST00000464605 C15orf52Q6ZUT6 534 aaKnown RBP27.84■■■□□ 2.05
UBA3-206ENST00000464605 GMLQ99445 158 aa27.84■■■□□ 2.05
UBA3-206ENST00000464605 COA1Q9GZY4 146 aa27.84■■■□□ 2.05
UBA3-206ENST00000464605 CNNM1Q9NRU3 951 aa27.84■■■□□ 2.05
UBA3-206ENST00000464605 TRPM7Q96QT4 1865 aa27.84■■■□□ 2.05
UBA3-206ENST00000464605 RSBN1LQ6PCB5 846 aaPredicted RBP27.83■■■□□ 2.05
UBA3-206ENST00000464605 ATF7IPQ6VMQ6 1270 aa27.83■■■□□ 2.05
UBA3-206ENST00000464605 H7C1D1 291 aa27.82■■■□□ 2.04
UBA3-206ENST00000464605 IPO8O15397 1037 aaKnown RBP27.82■■■□□ 2.04
UBA3-206ENST00000464605 EGFRP00533 1210 aa27.82■■■□□ 2.04
UBA3-206ENST00000464605 RFX5P48382 616 aaPredicted RBP27.82■■■□□ 2.04
UBA3-206ENST00000464605 USP17L3A6NCW0 530 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 USP17L4A6NCW7 530 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 UBTFL1P0CB47 393 aaPredicted RBP27.81■■■□□ 2.04
UBA3-206ENST00000464605 KCNJ4P48050 445 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 LRRC24Q50LG9 513 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 USP17L1Q7RTZ2 530 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 SAMD7Q7Z3H4 446 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 KLHDC4Q8TBB5 520 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 FRAT1Q92837 279 aaPredicted RBP27.81■■■□□ 2.04
UBA3-206ENST00000464605 MEIS3Q99687 375 aa27.81■■■□□ 2.04
UBA3-206ENST00000464605 AGBL3Q8NEM8 1001 aa27.8■■■□□ 2.04
UBA3-206ENST00000464605 PLIN1O60240 522 aa27.79■■■□□ 2.04
UBA3-206ENST00000464605 DACT2Q5SW24 774 aa27.79■■■□□ 2.04
UBA3-206ENST00000464605 CD209Q9NNX6 404 aa27.79■■■□□ 2.04
UBA3-206ENST00000464605 ZNF280AP59817 542 aaPredicted RBP27.78■■■□□ 2.04
UBA3-206ENST00000464605 FMR1Q06787 632 aaKnown RBP eCLIP27.78■■■□□ 2.04
UBA3-206ENST00000464605 ZC3H15Q8WU90 426 aaKnown RBP27.78■■■□□ 2.04
UBA3-206ENST00000464605 MXD3Q9BW11 206 aa27.78■■■□□ 2.04
UBA3-206ENST00000464605 LRRFIP2Q9Y608 721 aaKnown RBP27.78■■■□□ 2.04
UBA3-206ENST00000464605 TBC1D10BQ4KMP7 808 aaPredicted RBP27.77■■■□□ 2.04
UBA3-206ENST00000464605 STRIP1Q5VSL9 837 aa27.77■■■□□ 2.04
UBA3-206ENST00000464605 MROH5Q6ZUA9 1318 aa27.76■■■□□ 2.03
UBA3-206ENST00000464605 RASSF10A6NK89 507 aa27.76■■■□□ 2.03
UBA3-206ENST00000464605 VEGFBP49765 207 aa27.76■■■□□ 2.03
UBA3-206ENST00000464605 PTPN12Q05209 780 aaKnown RBP27.76■■■□□ 2.03
UBA3-206ENST00000464605 UBE4AQ14139 1066 aa27.76■■■□□ 2.03
UBA3-206ENST00000464605 ZKSCAN2Q63HK3 967 aa27.76■■■□□ 2.03
UBA3-206ENST00000464605 VGLL2Q8N8G2 317 aa27.76■■■□□ 2.03
UBA3-206ENST00000464605 CLUAP1Q96AJ1 413 aa27.76■■■□□ 2.03
UBA3-206ENST00000464605 TRAF5O00463 557 aa27.74■■■□□ 2.03
UBA3-206ENST00000464605 IL1R1P14778 569 aa27.74■■■□□ 2.03
UBA3-206ENST00000464605 RBM26Q5T8P6 1007 aaKnown RBP27.74■■■□□ 2.03
UBA3-206ENST00000464605 TTLL5Q6EMB2 1281 aa27.74■■■□□ 2.03
UBA3-206ENST00000464605 GLIS2Q9BZE0 524 aaPredicted RBP27.73■■■□□ 2.03
UBA3-206ENST00000464605 USP17L8P0C7I0 530 aa27.72■■■□□ 2.03
UBA3-206ENST00000464605 GTF2IP78347 998 aa27.72■■■□□ 2.03
UBA3-206ENST00000464605 TMEM57Q8N5G2 664 aa27.72■■■□□ 2.03
UBA3-206ENST00000464605 EYA2O00167 538 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 PDE8BO95263 885 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 GNAI3P08754 354 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 KIF4BQ2VIQ3 1234 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 DEFB115Q30KQ5 88 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 METTL24Q5JXM2 366 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 ATG9AQ7Z3C6 839 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 ZNF804AQ7Z570 1209 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 FAM84BQ96KN1 310 aaPredicted RBP27.71■■■□□ 2.03
UBA3-206ENST00000464605 HDAC5Q9UQL6 1122 aa27.71■■■□□ 2.03
UBA3-206ENST00000464605 CST9Q5W186 159 aa27.7■■■□□ 2.02
UBA3-206ENST00000464605 FBXW7Q969H0 707 aa27.7■■■□□ 2.02
UBA3-206ENST00000464605 ASTN2O75129 1339 aaPredicted RBP27.69■■■□□ 2.02
UBA3-206ENST00000464605 MYO3BQ8WXR4 1341 aa27.69■■■□□ 2.02
UBA3-206ENST00000464605 GYG1P46976 350 aa27.69■■■□□ 2.02
UBA3-206ENST00000464605 CERS5Q8N5B7 392 aa27.69■■■□□ 2.02
UBA3-206ENST00000464605 MYOZ2Q9NPC6 264 aa27.69■■■□□ 2.02
UBA3-206ENST00000464605 ABT1Q9ULW3 272 aaKnown RBP27.69■■■□□ 2.02
UBA3-206ENST00000464605 RLBP1P12271 317 aa27.68■■■□□ 2.02
UBA3-206ENST00000464605 FGFR2P21802 821 aa27.68■■■□□ 2.02
UBA3-206ENST00000464605 MTX1Q13505 466 aa27.68■■■□□ 2.02
UBA3-206ENST00000464605 CDC37L1Q7L3B6 337 aa27.68■■■□□ 2.02
UBA3-206ENST00000464605 TNS4Q8IZW8 715 aa27.68■■■□□ 2.02
UBA3-206ENST00000464605 TDRD7Q8NHU6 1098 aaKnown RBP27.68■■■□□ 2.02
UBA3-206ENST00000464605 DLK2Q6UY11 383 aa27.67■■■□□ 2.02
UBA3-206ENST00000464605 FBXO33Q7Z6M2 555 aa27.67■■■□□ 2.02
UBA3-206ENST00000464605 FBXO3Q9UK99 471 aa27.67■■■□□ 2.02
UBA3-206ENST00000464605 FOXN1O15353 648 aa27.66■■■□□ 2.02
UBA3-206ENST00000464605 HIBADHP31937 336 aaKnown RBP27.66■■■□□ 2.02
UBA3-206ENST00000464605 SCARF1Q14162 830 aa27.66■■■□□ 2.02
UBA3-206ENST00000464605 USP48Q86UV5 1035 aa27.66■■■□□ 2.02
UBA3-206ENST00000464605 COPRSQ9NQ92 184 aa27.66■■■□□ 2.02
UBA3-206ENST00000464605 PA2G4Q9UQ80 394 aaKnown RBP27.66■■■□□ 2.02
UBA3-206ENST00000464605 CIAO1O76071 339 aa27.65■■■□□ 2.02
UBA3-206ENST00000464605 SASH1O94885 1247 aa27.65■■■□□ 2.02
UBA3-206ENST00000464605 SIL1Q9H173 461 aa27.65■■■□□ 2.02
UBA3-206ENST00000464605 WBP1LQ9NX94 342 aa27.65■■■□□ 2.02
UBA3-206ENST00000464605 FAM205AQ6ZU69 1335 aa27.65■■■□□ 2.02
UBA3-206ENST00000464605 WDR33Q9C0J8 1336 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms