RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 KDM4AO75164 1064 aa13□□□□□ -0.33
PITRM1-209ENST00000464395 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
PITRM1-209ENST00000464395 FERMT3Q86UX7 667 aa13□□□□□ -0.33
PITRM1-209ENST00000464395 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
PITRM1-209ENST00000464395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13□□□□□ -0.33
PITRM1-209ENST00000464395 KRT85P78386 507 aa13□□□□□ -0.33
PITRM1-209ENST00000464395 STK3Q13188 491 aa13□□□□□ -0.33
PITRM1-209ENST00000464395 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
PITRM1-209ENST00000464395 COL4A1P02462 1669 aa12.99□□□□□ -0.33
PITRM1-209ENST00000464395 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
PITRM1-209ENST00000464395 ZBTB38Q8NAP3 1195 aaPredicted RBP12.99□□□□□ -0.33
PITRM1-209ENST00000464395 BRF1Q92994 677 aa12.99□□□□□ -0.33
PITRM1-209ENST00000464395 SYNE4Q8N205 404 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 USP25Q9UHP3 1055 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 HMGB1P09429 215 aaKnown RBP12.98□□□□□ -0.33
PITRM1-209ENST00000464395 FDPSP14324 419 aaKnown RBP12.98□□□□□ -0.33
PITRM1-209ENST00000464395 HLFQ16534 295 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 XAGE2Q96GT9 111 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 NAP1L5Q96NT1 182 aaPredicted RBP12.98□□□□□ -0.33
PITRM1-209ENST00000464395 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
PITRM1-209ENST00000464395 ADCY5O95622 1261 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
PITRM1-209ENST00000464395 ZNF512BQ96KM6 892 aaPredicted RBP12.98□□□□□ -0.33
PITRM1-209ENST00000464395 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
PITRM1-209ENST00000464395 MYH14Q7Z406 1995 aaKnown RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 COL5A3P25940 1745 aaPredicted RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 MSNP26038 577 aaKnown RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
PITRM1-209ENST00000464395 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 SCAND2PQ9GZW5 306 aaPredicted RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 PDIA3P30101 505 aaKnown RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 NAA16Q6N069 864 aaPredicted RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
PITRM1-209ENST00000464395 ROBO1Q9Y6N7 1651 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 APOBRQ0VD83 1088 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 CLSTN2Q9H4D0 955 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
PITRM1-209ENST00000464395 ANTXR2P58335 489 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 MB21D2Q8IYB1 491 aaPredicted RBP12.96□□□□□ -0.33
PITRM1-209ENST00000464395 FAM89AQ96GI7 184 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.33
PITRM1-209ENST00000464395 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.34
PITRM1-209ENST00000464395 DDX11Q96FC9 970 aa12.96□□□□□ -0.34
PITRM1-209ENST00000464395 KCNF1Q9H3M0 494 aa12.96□□□□□ -0.34
PITRM1-209ENST00000464395 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.34
PITRM1-209ENST00000464395 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.34
PITRM1-209ENST00000464395 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
PITRM1-209ENST00000464395 NR1I2O75469 434 aa12.95□□□□□ -0.34
PITRM1-209ENST00000464395 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.95□□□□□ -0.34
PITRM1-209ENST00000464395 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
PITRM1-209ENST00000464395 PUS7LQ9H0K6 701 aaKnown RBP12.95□□□□□ -0.34
PITRM1-209ENST00000464395 ZSCAN16Q9H4T2 348 aaPredicted RBP12.95□□□□□ -0.34
PITRM1-209ENST00000464395 TPM2P07951 284 aa12.95□□□□□ -0.34
PITRM1-209ENST00000464395 SPTLC3Q9NUV7 552 aa12.95□□□□□ -0.34
PITRM1-209ENST00000464395 DACT1Q9NYF0 836 aa12.95□□□□□ -0.34
PITRM1-209ENST00000464395 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
PITRM1-209ENST00000464395 MCAMP43121 646 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
PITRM1-209ENST00000464395 SPATA32Q96LK8 384 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
PITRM1-209ENST00000464395 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 NEDD4P46934 1319 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 BCL9LQ86UU0 1499 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 ZAP70P43403 619 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 TYRO3Q06418 890 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 PI16Q6UXB8 463 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 ENGASEQ8NFI3 743 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
PITRM1-209ENST00000464395 TCRBV5S4A2TA0A5A2 114 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 FGAP02671 866 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 PIBF1Q8WXW3 757 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 GOLPH3LQ9H4A5 285 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 GREM2Q9H772 168 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 FGFR2P21802 821 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 MAP3K11Q16584 847 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 CCDC57Q2TAC2 916 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 FTOQ9C0B1 505 aaKnown RBP eCLIP12.93□□□□□ -0.34
PITRM1-209ENST00000464395 NCOA5Q9HCD5 579 aaKnown RBP12.93□□□□□ -0.34
PITRM1-209ENST00000464395 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 WDR19Q8NEZ3 1342 aa12.93□□□□□ -0.34
PITRM1-209ENST00000464395 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
PITRM1-209ENST00000464395 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
PITRM1-209ENST00000464395 ZNF830Q96NB3 372 aaPredicted RBP12.92□□□□□ -0.34
PITRM1-209ENST00000464395 DDX19AQ9NUU7 478 aaKnown RBP12.92□□□□□ -0.34
PITRM1-209ENST00000464395 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
PITRM1-209ENST00000464395 CCDC192P0DO97 292 aa12.92□□□□□ -0.34
PITRM1-209ENST00000464395 APPBP2Q92624 585 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms