RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 MPHOSPH8Q99549 860 aa22.27■■□□□ 1.16
COL5A1-204ENST00000463925 GGA3Q9NZ52 723 aa22.27■■□□□ 1.16
COL5A1-204ENST00000463925 ADM5C9JUS6 153 aa22.26■■□□□ 1.15
COL5A1-204ENST00000463925 ANKRD2Q9GZV1 360 aa22.26■■□□□ 1.15
COL5A1-204ENST00000463925 COA1Q9GZY4 146 aa22.26■■□□□ 1.15
COL5A1-204ENST00000463925 ZNF646O15015 1829 aaPredicted RBP22.26■■□□□ 1.15
COL5A1-204ENST00000463925 USP17L8P0C7I0 530 aa22.25■■□□□ 1.15
COL5A1-204ENST00000463925 DLK2Q6UY11 383 aa22.25■■□□□ 1.15
COL5A1-204ENST00000463925 SULF1Q8IWU6 871 aa22.25■■□□□ 1.15
COL5A1-204ENST00000463925 BEGAINQ9BUH8 593 aa22.25■■□□□ 1.15
COL5A1-204ENST00000463925 ZNF804BA4D1E1 1349 aa22.25■■□□□ 1.15
COL5A1-204ENST00000463925 ANKRD18BA2A2Z9 1011 aa22.24■■□□□ 1.15
COL5A1-204ENST00000463925 AOC2O75106 756 aa22.24■■□□□ 1.15
COL5A1-204ENST00000463925 GBA2Q9HCG7 927 aaPredicted RBP22.24■■□□□ 1.15
COL5A1-204ENST00000463925 MYOZ2Q9NPC6 264 aa22.24■■□□□ 1.15
COL5A1-204ENST00000463925 MYO3BQ8WXR4 1341 aa22.24■■□□□ 1.15
COL5A1-204ENST00000463925 CAPN15O75808 1086 aa22.23■■□□□ 1.15
COL5A1-204ENST00000463925 HUNKP57058 714 aa22.23■■□□□ 1.15
COL5A1-204ENST00000463925 FOXO4P98177 505 aa22.23■■□□□ 1.15
COL5A1-204ENST00000463925 DACT2Q5SW24 774 aa22.23■■□□□ 1.15
COL5A1-204ENST00000463925 STRIP1Q5VSL9 837 aa22.23■■□□□ 1.15
COL5A1-204ENST00000463925 TXNRD3Q86VQ6 643 aa22.23■■□□□ 1.15
COL5A1-204ENST00000463925 ASTN2O75129 1339 aaPredicted RBP22.23■■□□□ 1.15
COL5A1-204ENST00000463925 BRPF1P55201 1214 aaPredicted RBP22.22■■□□□ 1.15
COL5A1-204ENST00000463925 CHRNDQ07001 517 aa22.22■■□□□ 1.15
COL5A1-204ENST00000463925 SCARF1Q14162 830 aa22.22■■□□□ 1.15
COL5A1-204ENST00000463925 PITPNM2Q9BZ72 1349 aa22.22■■□□□ 1.15
COL5A1-204ENST00000463925 GRM8O00222 908 aa22.21■■□□□ 1.15
COL5A1-204ENST00000463925 ALDH1L1O75891 902 aa22.21■■□□□ 1.15
COL5A1-204ENST00000463925 NOGQ13253 232 aa22.21■■□□□ 1.15
COL5A1-204ENST00000463925 IFIT5Q13325 482 aaKnown RBP22.21■■□□□ 1.15
COL5A1-204ENST00000463925 ANGEL2Q5VTE6 544 aaKnown RBP22.21■■□□□ 1.15
COL5A1-204ENST00000463925 C2orf69Q8N8R5 385 aa22.21■■□□□ 1.15
COL5A1-204ENST00000463925 A0A1B0GUL6 1792 aa22.2■■□□□ 1.14
COL5A1-204ENST00000463925 CA12O43570 354 aa22.2■■□□□ 1.14
COL5A1-204ENST00000463925 KLRK1P26718 216 aa22.2■■□□□ 1.14
COL5A1-204ENST00000463925 KCNJ4P48050 445 aa22.19■■□□□ 1.14
COL5A1-204ENST00000463925 MMP14P50281 582 aa22.19■■□□□ 1.14
COL5A1-204ENST00000463925 RGMBQ6NW40 437 aa22.19■■□□□ 1.14
COL5A1-204ENST00000463925 CDCA5Q96FF9 252 aa22.19■■□□□ 1.14
COL5A1-204ENST00000463925 IRS2Q9Y4H2 1338 aa22.19■■□□□ 1.14
COL5A1-204ENST00000463925 EPHA10Q5JZY3 1008 aa22.18■■□□□ 1.14
COL5A1-204ENST00000463925 LMBR1LQ6UX01 489 aa22.18■■□□□ 1.14
COL5A1-204ENST00000463925 C15orf52Q6ZUT6 534 aaKnown RBP22.18■■□□□ 1.14
COL5A1-204ENST00000463925 OGFOD1Q8N543 542 aa22.18■■□□□ 1.14
COL5A1-204ENST00000463925 MXD3Q9BW11 206 aa22.18■■□□□ 1.14
COL5A1-204ENST00000463925 SRCIN1Q9C0H9 1055 aa22.18■■□□□ 1.14
COL5A1-204ENST00000463925 CHMP3Q9Y3E7 222 aa22.18■■□□□ 1.14
COL5A1-204ENST00000463925 TTLL5Q6EMB2 1281 aa22.17■■□□□ 1.14
COL5A1-204ENST00000463925 FBXW7Q969H0 707 aa22.17■■□□□ 1.14
COL5A1-204ENST00000463925 C9orf78Q9NZ63 289 aaPredicted RBP22.17■■□□□ 1.14
COL5A1-204ENST00000463925 FAM155AB1AL88 458 aaPredicted RBP22.16■■□□□ 1.14
COL5A1-204ENST00000463925 CCDC57Q2TAC2 916 aa22.16■■□□□ 1.14
COL5A1-204ENST00000463925 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
COL5A1-204ENST00000463925 CCDC102AQ96A19 550 aa22.16■■□□□ 1.14
COL5A1-204ENST00000463925 CD209Q9NNX6 404 aa22.16■■□□□ 1.14
COL5A1-204ENST00000463925 PAPPA2Q9BXP8 1791 aa22.15■■□□□ 1.14
COL5A1-204ENST00000463925 E9PSI1 815 aa22.15■■□□□ 1.14
COL5A1-204ENST00000463925 FKBP1BP68106 108 aa22.15■■□□□ 1.14
COL5A1-204ENST00000463925 WNT10BO00744 389 aa22.14■■□□□ 1.13
COL5A1-204ENST00000463925 TAF5LO75529 589 aa22.14■■□□□ 1.13
COL5A1-204ENST00000463925 NBPF9Q3BBW0 867 aa22.14■■□□□ 1.13
COL5A1-204ENST00000463925 ZIC5Q96T25 663 aa22.14■■□□□ 1.13
COL5A1-204ENST00000463925 UTYO14607 1347 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 SNAP23O00161 211 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 SLC10A3P09131 477 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 ZNF157P51786 506 aaPredicted RBP22.13■■□□□ 1.13
COL5A1-204ENST00000463925 GTF2IP78347 998 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 TAF7LQ5H9L4 462 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 LDHAL6AQ6ZMR3 332 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 MRPL50Q8N5N7 158 aaKnown RBP22.13■■□□□ 1.13
COL5A1-204ENST00000463925 HELBQ8NG08 1087 aaPredicted RBP22.13■■□□□ 1.13
COL5A1-204ENST00000463925 TSKSQ9UJT2 592 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 HDAC9Q9UKV0 1011 aa22.13■■□□□ 1.13
COL5A1-204ENST00000463925 PTPRCP08575 1304 aa22.12■■□□□ 1.13
COL5A1-204ENST00000463925 ZNF804AQ7Z570 1209 aa22.12■■□□□ 1.13
COL5A1-204ENST00000463925 KIAA0825Q8IV33 1275 aa22.12■■□□□ 1.13
COL5A1-204ENST00000463925 SUCLG2Q96I99 432 aa22.12■■□□□ 1.13
COL5A1-204ENST00000463925 ZNF594Q96JF6 807 aaPredicted RBP22.12■■□□□ 1.13
COL5A1-204ENST00000463925 IL1R1P14778 569 aa22.11■■□□□ 1.13
COL5A1-204ENST00000463925 KAZALD1Q96I82 304 aa22.11■■□□□ 1.13
COL5A1-204ENST00000463925 ZBED3Q96IU2 234 aaPredicted RBP22.11■■□□□ 1.13
COL5A1-204ENST00000463925 CNNM1Q9NRU3 951 aa22.11■■□□□ 1.13
COL5A1-204ENST00000463925 SASH1O94885 1247 aa22.1■■□□□ 1.13
COL5A1-204ENST00000463925 NBPF7P0C2Y1 421 aaPredicted RBP22.1■■□□□ 1.13
COL5A1-204ENST00000463925 SLFN5Q08AF3 891 aa22.09■■□□□ 1.13
COL5A1-204ENST00000463925 SCAF8Q9UPN6 1271 aaKnown RBP22.09■■□□□ 1.13
COL5A1-204ENST00000463925 FKBP1AP62942 108 aaKnown RBP22.08■■□□□ 1.13
COL5A1-204ENST00000463925 KIF23Q02241 960 aaPredicted RBP22.08■■□□□ 1.13
COL5A1-204ENST00000463925 RABL6Q3YEC7 729 aaPredicted RBP22.08■■□□□ 1.13
COL5A1-204ENST00000463925 RASAL3Q86YV0 1011 aa22.08■■□□□ 1.13
COL5A1-204ENST00000463925 APOBEC3FQ8IUX4 373 aaKnown RBP22.08■■□□□ 1.13
COL5A1-204ENST00000463925 CERS5Q8N5B7 392 aa22.08■■□□□ 1.13
COL5A1-204ENST00000463925 ABHD8Q96I13 439 aa22.08■■□□□ 1.13
COL5A1-204ENST00000463925 SAGE1Q9NXZ1 904 aa22.08■■□□□ 1.13
COL5A1-204ENST00000463925 UBE4AQ14139 1066 aa22.07■■□□□ 1.12
COL5A1-204ENST00000463925 SSH1Q8WYL5 1049 aa22.07■■□□□ 1.12
COL5A1-204ENST00000463925 COL1A1P02452 1464 aaPredicted RBP22.07■■□□□ 1.12
COL5A1-204ENST00000463925 PLIN1O60240 522 aa22.06■■□□□ 1.12
COL5A1-204ENST00000463925 NF2P35240 595 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms