RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TRIM27P14373 513 aa16.31■□□□□ 0.2
XRN1-203ENST00000463916 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
XRN1-203ENST00000463916 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
XRN1-203ENST00000463916 MXD3Q9BW11 206 aa16.31■□□□□ 0.2
XRN1-203ENST00000463916 RIPOR2Q9Y4F9 1068 aa16.31■□□□□ 0.2
XRN1-203ENST00000463916 H7C1D1 291 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 KCNJ4P48050 445 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 RSBN1LQ6PCB5 846 aaPredicted RBP16.3■□□□□ 0.2
XRN1-203ENST00000463916 GMLQ99445 158 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 COA1Q9GZY4 146 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 USP17L3A6NCW0 530 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 USP17L4A6NCW7 530 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 TRAF5O00463 557 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 PSME4Q14997 1843 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 TBC1D10BQ4KMP7 808 aaPredicted RBP16.3■□□□□ 0.2
XRN1-203ENST00000463916 LRRC24Q50LG9 513 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
XRN1-203ENST00000463916 USP17L1Q7RTZ2 530 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 MEIS3Q99687 375 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 PGAP2Q9UHJ9 254 aa16.3■□□□□ 0.2
XRN1-203ENST00000463916 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
XRN1-203ENST00000463916 KLRG1Q96E93 195 aa16.29■□□□□ 0.2
XRN1-203ENST00000463916 UBTFL1P0CB47 393 aaPredicted RBP16.28■□□□□ 0.2
XRN1-203ENST00000463916 RFX5P48382 616 aaPredicted RBP16.28■□□□□ 0.2
XRN1-203ENST00000463916 DACT2Q5SW24 774 aa16.28■□□□□ 0.2
XRN1-203ENST00000463916 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
XRN1-203ENST00000463916 CLUAP1Q96AJ1 413 aa16.28■□□□□ 0.2
XRN1-203ENST00000463916 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
XRN1-203ENST00000463916 ZNF646O15015 1829 aaPredicted RBP16.28■□□□□ 0.2
XRN1-203ENST00000463916 C15orf52Q6ZUT6 534 aaKnown RBP16.28■□□□□ 0.2
XRN1-203ENST00000463916 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
XRN1-203ENST00000463916 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.2
XRN1-203ENST00000463916 DLK2Q6UY11 383 aa16.27■□□□□ 0.2
XRN1-203ENST00000463916 AGBL3Q8NEM8 1001 aa16.27■□□□□ 0.2
XRN1-203ENST00000463916 GLIS2Q9BZE0 524 aaPredicted RBP16.27■□□□□ 0.2
XRN1-203ENST00000463916 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
XRN1-203ENST00000463916 ZNF280AP59817 542 aaPredicted RBP16.26■□□□□ 0.19
XRN1-203ENST00000463916 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
XRN1-203ENST00000463916 ZC3H15Q8WU90 426 aaKnown RBP16.26■□□□□ 0.19
XRN1-203ENST00000463916 FBXW7Q969H0 707 aa16.26■□□□□ 0.19
XRN1-203ENST00000463916 ZNF609O15014 1411 aa16.26■□□□□ 0.19
XRN1-203ENST00000463916 ASTN2O75129 1339 aaPredicted RBP16.26■□□□□ 0.19
XRN1-203ENST00000463916 TMEM88BA6NKF7 163 aa16.26■□□□□ 0.19
XRN1-203ENST00000463916 GTF2IP78347 998 aa16.26■□□□□ 0.19
XRN1-203ENST00000463916 CST9Q5W186 159 aa16.26■□□□□ 0.19
XRN1-203ENST00000463916 TTLL5Q6EMB2 1281 aa16.26■□□□□ 0.19
XRN1-203ENST00000463916 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
XRN1-203ENST00000463916 PTPN12Q05209 780 aaKnown RBP16.25■□□□□ 0.19
XRN1-203ENST00000463916 VGLL2Q8N8G2 317 aa16.25■□□□□ 0.19
XRN1-203ENST00000463916 MROH5Q6ZUA9 1318 aa16.25■□□□□ 0.19
XRN1-203ENST00000463916 KIF4BQ2VIQ3 1234 aa16.25■□□□□ 0.19
XRN1-203ENST00000463916 MKRN1Q9UHC7 482 aaKnown RBP16.25■□□□□ 0.19
XRN1-203ENST00000463916 IL1R1P14778 569 aa16.24■□□□□ 0.19
XRN1-203ENST00000463916 GYG1P46976 350 aa16.24■□□□□ 0.19
XRN1-203ENST00000463916 UBE4AQ14139 1066 aa16.24■□□□□ 0.19
XRN1-203ENST00000463916 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
XRN1-203ENST00000463916 ZKSCAN2Q63HK3 967 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 TMEM57Q8N5G2 664 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 JMYQ8N9B5 988 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 FAM84BQ96KN1 310 aaPredicted RBP16.23■□□□□ 0.19
XRN1-203ENST00000463916 MYOZ2Q9NPC6 264 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
XRN1-203ENST00000463916 PDE8BO95263 885 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 ATG9AQ7Z3C6 839 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 ZNF804AQ7Z570 1209 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 CERS5Q8N5B7 392 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
XRN1-203ENST00000463916 EYA2O00167 538 aa16.22■□□□□ 0.19
XRN1-203ENST00000463916 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
XRN1-203ENST00000463916 SIL1Q9H173 461 aa16.22■□□□□ 0.19
XRN1-203ENST00000463916 GNAI3P08754 354 aa16.22■□□□□ 0.19
XRN1-203ENST00000463916 RLBP1P12271 317 aa16.22■□□□□ 0.19
XRN1-203ENST00000463916 SCARF1Q14162 830 aa16.22■□□□□ 0.19
XRN1-203ENST00000463916 KIAA0825Q8IV33 1275 aa16.22■□□□□ 0.19
XRN1-203ENST00000463916 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
XRN1-203ENST00000463916 GGA3Q9NZ52 723 aa16.21■□□□□ 0.19
XRN1-203ENST00000463916 CNTNAP1P78357 1384 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 ADM5C9JUS6 153 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
XRN1-203ENST00000463916 NBPF9Q3BBW0 867 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
XRN1-203ENST00000463916 SCAF8Q9UPN6 1271 aaKnown RBP16.2■□□□□ 0.18
XRN1-203ENST00000463916 MYO3BQ8WXR4 1341 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 SASH1O94885 1247 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 CELF2O95319 508 aaKnown RBP16.2■□□□□ 0.18
XRN1-203ENST00000463916 ANGEL2Q5VTE6 544 aaKnown RBP16.2■□□□□ 0.18
XRN1-203ENST00000463916 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 DCPSQ96C86 337 aaKnown RBP16.2■□□□□ 0.18
XRN1-203ENST00000463916 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
XRN1-203ENST00000463916 FGFR2P21802 821 aa16.19■□□□□ 0.18
XRN1-203ENST00000463916 OGFOD1Q8N543 542 aa16.19■□□□□ 0.18
XRN1-203ENST00000463916 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
XRN1-203ENST00000463916 ABT1Q9ULW3 272 aaKnown RBP16.19■□□□□ 0.18
XRN1-203ENST00000463916 IQSEC3Q9UPP2 1182 aaPredicted RBP16.19■□□□□ 0.18
XRN1-203ENST00000463916 HDAC5Q9UQL6 1122 aa16.19■□□□□ 0.18
XRN1-203ENST00000463916 RASSF10A6NK89 507 aa16.18■□□□□ 0.18
XRN1-203ENST00000463916 WNT10BO00744 389 aa16.18■□□□□ 0.18
XRN1-203ENST00000463916 VEGFBP49765 207 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms