RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
TMEM54-203ENST00000463914 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
TMEM54-203ENST00000463914 PI4KAP2A4QPH2 592 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 SASH1O94885 1247 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 KLRK1P26718 216 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 NBPF9Q3BBW0 867 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 PODNQ7Z5L7 613 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 PI4KAP1Q8N8J0 262 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 FBXW7Q969H0 707 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
TMEM54-203ENST00000463914 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
TMEM54-203ENST00000463914 UBE2Q2LH0YL09 131 aa13.17□□□□□ -0.3
TMEM54-203ENST00000463914 FKBP1BP68106 108 aa13.17□□□□□ -0.3
TMEM54-203ENST00000463914 G2E3Q7L622 706 aa13.17□□□□□ -0.3
TMEM54-203ENST00000463914 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
TMEM54-203ENST00000463914 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
TMEM54-203ENST00000463914 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
TMEM54-203ENST00000463914 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-203ENST00000463914 WNT10BO00744 389 aa13.15□□□□□ -0.3
TMEM54-203ENST00000463914 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
TMEM54-203ENST00000463914 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
TMEM54-203ENST00000463914 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.3
TMEM54-203ENST00000463914 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
TMEM54-203ENST00000463914 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
TMEM54-203ENST00000463914 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
TMEM54-203ENST00000463914 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
TMEM54-203ENST00000463914 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
TMEM54-203ENST00000463914 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 H7C1W4 665 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 ITGA6P23229 1130 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
TMEM54-203ENST00000463914 CASP7P55210 303 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 PRKG1Q13976 671 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
TMEM54-203ENST00000463914 STRIP1Q5VSL9 837 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
TMEM54-203ENST00000463914 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 ZNF296Q8WUU4 475 aaPredicted RBP13.13□□□□□ -0.31
TMEM54-203ENST00000463914 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
TMEM54-203ENST00000463914 CACNA1FO60840 1977 aa13.12□□□□□ -0.31
TMEM54-203ENST00000463914 GCKRQ14397 625 aa13.12□□□□□ -0.31
TMEM54-203ENST00000463914 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
TMEM54-203ENST00000463914 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
TMEM54-203ENST00000463914 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 SNAP23O00161 211 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 NF2P35240 595 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 GTF2IP78347 998 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
TMEM54-203ENST00000463914 FLIIQ13045 1269 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 TTLL5Q6EMB2 1281 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 APOBEC3FQ8IUX4 373 aaKnown RBP13.11□□□□□ -0.31
TMEM54-203ENST00000463914 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 MPHOSPH8Q99549 860 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 HDAC9Q9UKV0 1011 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 LAMB1P07942 1786 aa13.11□□□□□ -0.31
TMEM54-203ENST00000463914 CHRNDQ07001 517 aa13.1□□□□□ -0.31
TMEM54-203ENST00000463914 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-203ENST00000463914 DNAAF4Q8WXU2 420 aa13.1□□□□□ -0.31
TMEM54-203ENST00000463914 ZBED3Q96IU2 234 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-203ENST00000463914 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
TMEM54-203ENST00000463914 R3HDMLQ9H3Y0 253 aa13.1□□□□□ -0.31
TMEM54-203ENST00000463914 PCDHAC2Q9Y5I4 1007 aa13.1□□□□□ -0.31
TMEM54-203ENST00000463914 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
TMEM54-203ENST00000463914 COL1A1P02452 1464 aaPredicted RBP13.1□□□□□ -0.31
TMEM54-203ENST00000463914 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 GPR25O00155 361 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 KCNJ4P48050 445 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 TM4SF4P48230 202 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
TMEM54-203ENST00000463914 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
TMEM54-203ENST00000463914 CSF1RP07333 972 aa13.08□□□□□ -0.32
TMEM54-203ENST00000463914 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
TMEM54-203ENST00000463914 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
TMEM54-203ENST00000463914 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-203ENST00000463914 LINS1Q8NG48 757 aa13.08□□□□□ -0.32
TMEM54-203ENST00000463914 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-203ENST00000463914 AOX1Q06278 1338 aa13.08□□□□□ -0.32
TMEM54-203ENST00000463914 TNRC18O15417 2968 aaPredicted RBP13.08□□□□□ -0.32
TMEM54-203ENST00000463914 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
TMEM54-203ENST00000463914 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
TMEM54-203ENST00000463914 F8W031 263 aaPredicted RBP13.07□□□□□ -0.32
TMEM54-203ENST00000463914 TAF5LO75529 589 aa13.07□□□□□ -0.32
TMEM54-203ENST00000463914 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
TMEM54-203ENST00000463914 PKN2Q16513 984 aaKnown RBP13.07□□□□□ -0.32
TMEM54-203ENST00000463914 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
TMEM54-203ENST00000463914 SPRYD7Q5W111 196 aa13.07□□□□□ -0.32
TMEM54-203ENST00000463914 CLMNQ96JQ2 1002 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms