RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CHMP3Q9Y3E7 222 aa23.93■■□□□ 1.42
SF3A1-205ENST00000463818 ASTN2O75129 1339 aaPredicted RBP23.92■■□□□ 1.42
SF3A1-205ENST00000463818 ADM5C9JUS6 153 aa23.92■■□□□ 1.42
SF3A1-205ENST00000463818 AOC2O75106 756 aa23.92■■□□□ 1.42
SF3A1-205ENST00000463818 CHRNDQ07001 517 aa23.92■■□□□ 1.42
SF3A1-205ENST00000463818 EPHA10Q5JZY3 1008 aa23.92■■□□□ 1.42
SF3A1-205ENST00000463818 LMBR1LQ6UX01 489 aa23.92■■□□□ 1.42
SF3A1-205ENST00000463818 C9orf78Q9NZ63 289 aaPredicted RBP23.92■■□□□ 1.42
SF3A1-205ENST00000463818 SCN9AQ15858 1988 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 GRM8O00222 908 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 ALDH1L1O75891 902 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 MAP2K2P36507 400 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 LBX1P52954 281 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 FBXW7Q969H0 707 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 MXD3Q9BW11 206 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 SRCIN1Q9C0H9 1055 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 MYOZ2Q9NPC6 264 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 GGA3Q9NZ52 723 aa23.91■■□□□ 1.42
SF3A1-205ENST00000463818 KLRK1P26718 216 aa23.9■■□□□ 1.42
SF3A1-205ENST00000463818 KCNJ4P48050 445 aa23.9■■□□□ 1.42
SF3A1-205ENST00000463818 DACT2Q5SW24 774 aa23.9■■□□□ 1.42
SF3A1-205ENST00000463818 SULF1Q8IWU6 871 aa23.9■■□□□ 1.42
SF3A1-205ENST00000463818 HELBQ8NG08 1087 aaPredicted RBP23.9■■□□□ 1.42
SF3A1-205ENST00000463818 E9PSI1 815 aa23.89■■□□□ 1.41
SF3A1-205ENST00000463818 TAF5LO75529 589 aa23.89■■□□□ 1.41
SF3A1-205ENST00000463818 HSPA8P11142 646 aaKnown RBP23.89■■□□□ 1.41
SF3A1-205ENST00000463818 HUNKP57058 714 aa23.89■■□□□ 1.41
SF3A1-205ENST00000463818 STRIP1Q5VSL9 837 aa23.89■■□□□ 1.41
SF3A1-205ENST00000463818 MRPL50Q8N5N7 158 aaKnown RBP23.89■■□□□ 1.41
SF3A1-205ENST00000463818 ZNF609O15014 1411 aa23.89■■□□□ 1.41
SF3A1-205ENST00000463818 TRPM7Q96QT4 1865 aa23.89■■□□□ 1.41
SF3A1-205ENST00000463818 CACNA1FO60840 1977 aa23.89■■□□□ 1.41
SF3A1-205ENST00000463818 SNAP23O00161 211 aa23.88■■□□□ 1.41
SF3A1-205ENST00000463818 CAPN15O75808 1086 aa23.88■■□□□ 1.41
SF3A1-205ENST00000463818 ANGEL2Q5VTE6 544 aaKnown RBP23.88■■□□□ 1.41
SF3A1-205ENST00000463818 TTLL5Q6EMB2 1281 aa23.88■■□□□ 1.41
SF3A1-205ENST00000463818 C2orf69Q8N8R5 385 aa23.88■■□□□ 1.41
SF3A1-205ENST00000463818 BEGAINQ9BUH8 593 aa23.88■■□□□ 1.41
SF3A1-205ENST00000463818 GBA2Q9HCG7 927 aaPredicted RBP23.88■■□□□ 1.41
SF3A1-205ENST00000463818 CCDC57Q2TAC2 916 aa23.87■■□□□ 1.41
SF3A1-205ENST00000463818 ZNF594Q96JF6 807 aaPredicted RBP23.87■■□□□ 1.41
SF3A1-205ENST00000463818 SLFN5Q08AF3 891 aa23.86■■□□□ 1.41
SF3A1-205ENST00000463818 OGFOD1Q8N543 542 aa23.86■■□□□ 1.41
SF3A1-205ENST00000463818 MYH3P11055 1940 aa23.86■■□□□ 1.41
SF3A1-205ENST00000463818 TAF7LQ5H9L4 462 aa23.85■■□□□ 1.41
SF3A1-205ENST00000463818 MYO3BQ8WXR4 1341 aa23.84■■□□□ 1.41
SF3A1-205ENST00000463818 GTF2IP78347 998 aa23.84■■□□□ 1.41
SF3A1-205ENST00000463818 NBPF9Q3BBW0 867 aa23.84■■□□□ 1.41
SF3A1-205ENST00000463818 LDHAL6AQ6ZMR3 332 aa23.84■■□□□ 1.41
SF3A1-205ENST00000463818 CDCA5Q96FF9 252 aa23.84■■□□□ 1.41
SF3A1-205ENST00000463818 SUCLG2Q96I99 432 aa23.84■■□□□ 1.41
SF3A1-205ENST00000463818 CD209Q9NNX6 404 aa23.84■■□□□ 1.41
SF3A1-205ENST00000463818 PLIN1O60240 522 aa23.83■■□□□ 1.41
SF3A1-205ENST00000463818 RGMBQ6NW40 437 aa23.83■■□□□ 1.41
SF3A1-205ENST00000463818 C15orf52Q6ZUT6 534 aaKnown RBP23.83■■□□□ 1.41
SF3A1-205ENST00000463818 SSH1Q8WYL5 1049 aa23.83■■□□□ 1.41
SF3A1-205ENST00000463818 CNNM1Q9NRU3 951 aa23.83■■□□□ 1.41
SF3A1-205ENST00000463818 IRS2Q9Y4H2 1338 aa23.83■■□□□ 1.4
SF3A1-205ENST00000463818 NBPF7P0C2Y1 421 aaPredicted RBP23.82■■□□□ 1.4
SF3A1-205ENST00000463818 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
SF3A1-205ENST00000463818 KAZALD1Q96I82 304 aa23.82■■□□□ 1.4
SF3A1-205ENST00000463818 ZIC5Q96T25 663 aa23.82■■□□□ 1.4
SF3A1-205ENST00000463818 SCAF8Q9UPN6 1271 aaKnown RBP23.82■■□□□ 1.4
SF3A1-205ENST00000463818 MMP14P50281 582 aa23.81■■□□□ 1.4
SF3A1-205ENST00000463818 NOGQ13253 232 aa23.81■■□□□ 1.4
SF3A1-205ENST00000463818 PITPNM2Q9BZ72 1349 aa23.81■■□□□ 1.4
SF3A1-205ENST00000463818 POLR2AP24928 1970 aaKnown RBP23.8■■□□□ 1.4
SF3A1-205ENST00000463818 WNT10BO00744 389 aa23.8■■□□□ 1.4
SF3A1-205ENST00000463818 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
SF3A1-205ENST00000463818 KIAA0825Q8IV33 1275 aa23.8■■□□□ 1.4
SF3A1-205ENST00000463818 CCDC102AQ96A19 550 aa23.8■■□□□ 1.4
SF3A1-205ENST00000463818 TSKSQ9UJT2 592 aa23.8■■□□□ 1.4
SF3A1-205ENST00000463818 HDAC9Q9UKV0 1011 aa23.8■■□□□ 1.4
SF3A1-205ENST00000463818 UTYO14607 1347 aa23.8■■□□□ 1.4
SF3A1-205ENST00000463818 PTPRCP08575 1304 aa23.8■■□□□ 1.4
SF3A1-205ENST00000463818 ZNF157P51786 506 aaPredicted RBP23.79■■□□□ 1.4
SF3A1-205ENST00000463818 ZNF804AQ7Z570 1209 aa23.79■■□□□ 1.4
SF3A1-205ENST00000463818 SPEF2Q9C093 1822 aa23.79■■□□□ 1.4
SF3A1-205ENST00000463818 FAM155AB1AL88 458 aaPredicted RBP23.78■■□□□ 1.4
SF3A1-205ENST00000463818 IL1R1P14778 569 aa23.78■■□□□ 1.4
SF3A1-205ENST00000463818 PRAMEF18Q5VWM3 479 aa23.78■■□□□ 1.4
SF3A1-205ENST00000463818 PUS3Q9BZE2 481 aaKnown RBP23.78■■□□□ 1.4
SF3A1-205ENST00000463818 CA12O43570 354 aa23.77■■□□□ 1.4
SF3A1-205ENST00000463818 SASH1O94885 1247 aa23.77■■□□□ 1.4
SF3A1-205ENST00000463818 TRMT2AQ8IZ69 625 aaKnown RBP23.77■■□□□ 1.4
SF3A1-205ENST00000463818 BICC1Q9H694 974 aaKnown RBP23.77■■□□□ 1.4
SF3A1-205ENST00000463818 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
SF3A1-205ENST00000463818 ALDH1L2Q3SY69 923 aa23.76■■□□□ 1.39
SF3A1-205ENST00000463818 CERS5Q8N5B7 392 aa23.76■■□□□ 1.39
SF3A1-205ENST00000463818 THSD7BQ9C0I4 1608 aa23.75■■□□□ 1.39
SF3A1-205ENST00000463818 FKBP1BP68106 108 aa23.75■■□□□ 1.39
SF3A1-205ENST00000463818 KIF23Q02241 960 aaPredicted RBP23.75■■□□□ 1.39
SF3A1-205ENST00000463818 UBE4AQ14139 1066 aa23.75■■□□□ 1.39
SF3A1-205ENST00000463818 ZBED3Q96IU2 234 aaPredicted RBP23.75■■□□□ 1.39
SF3A1-205ENST00000463818 RIPOR2Q9Y4F9 1068 aa23.75■■□□□ 1.39
SF3A1-205ENST00000463818 PSME4Q14997 1843 aa23.75■■□□□ 1.39
SF3A1-205ENST00000463818 RABL6Q3YEC7 729 aaPredicted RBP23.74■■□□□ 1.39
SF3A1-205ENST00000463818 ANKRD44Q8N8A2 993 aa23.74■■□□□ 1.39
SF3A1-205ENST00000463818 USP44Q9H0E7 712 aa23.74■■□□□ 1.39
SF3A1-205ENST00000463818 MOB2Q70IA6 237 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms