RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CCDC174Q6PII3 467 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 ADGBQ8N7X0 1667 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 TTC6Q86TZ1 520 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 CPLX3Q8WVH0 158 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 MSL1Q68DK7 614 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 KANK3Q6NY19 840 aa14.7□□□□□ -0.06
NUP58-206ENST00000463407 CCDC97Q96F63 343 aaPredicted RBP14.69□□□□□ -0.06
NUP58-206ENST00000463407 TMX3Q96JJ7 454 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 SOS1Q07889 1333 aaPredicted RBP14.69□□□□□ -0.06
NUP58-206ENST00000463407 ISM2Q6H9L7 571 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 CLIP2Q9UDT6 1046 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 CCDC191Q8NCU4 936 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 SUPT20HQ8NEM7 779 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 TMOD4Q9NZQ9 345 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 PUM3Q15397 648 aaKnown RBP14.69□□□□□ -0.06
NUP58-206ENST00000463407 TAX1BP1Q86VP1 789 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 FAM114A1Q8IWE2 563 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 DNAJC10Q8IXB1 793 aa14.69□□□□□ -0.06
NUP58-206ENST00000463407 STX1AQ16623 288 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 STAT6P42226 847 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 CHST3Q7LGC8 479 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 ZSCAN16Q9H4T2 348 aaPredicted RBP14.68□□□□□ -0.06
NUP58-206ENST00000463407 TNNT1P13805 278 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 FAM193AP78312 1265 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
NUP58-206ENST00000463407 QTRT2Q9H974 415 aaKnown RBP14.68□□□□□ -0.06
NUP58-206ENST00000463407 CTNNBL1Q8WYA6 563 aaPredicted RBP14.68□□□□□ -0.06
NUP58-206ENST00000463407 CCDC102BQ68D86 513 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 SH2D4AQ9H788 454 aa14.68□□□□□ -0.06
NUP58-206ENST00000463407 ZSCAN12O43309 604 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 MBD4O95243 580 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 CFAP65Q6ZU64 1925 aaKnown RBP14.67□□□□□ -0.06
NUP58-206ENST00000463407 TSPOAP1O95153 1857 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 YEATS4O95619 227 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 G2E3Q7L622 706 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 ZSCAN22P10073 491 aaPredicted RBP14.67□□□□□ -0.06
NUP58-206ENST00000463407 MAP3K9P80192 1104 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 GPR162Q16538 588 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 SAMD9Q5K651 1589 aa14.67□□□□□ -0.06
NUP58-206ENST00000463407 ZNF594Q96JF6 807 aaPredicted RBP14.66□□□□□ -0.06
NUP58-206ENST00000463407 MAP7D2Q96T17 732 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 CWC15Q9P013 229 aaKnown RBP14.66□□□□□ -0.06
NUP58-206ENST00000463407 TAF5LO75529 589 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 ALDH1B1P30837 517 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 CASQ1P31415 396 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 DNA2P51530 1060 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 PRKG1Q13976 671 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 NIM1KQ8IY84 436 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 BABAM1Q9NWV8 329 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 ZBTB21Q9ULJ3 1066 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 MAST3O60307 1309 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 MACROD2A1Z1Q3 448 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 EYA2O00167 538 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 BMP15O95972 392 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 AFMP43652 599 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 YEATS2Q9ULM3 1422 aa14.66□□□□□ -0.06
NUP58-206ENST00000463407 PARP1P09874 1014 aaKnown RBP14.66□□□□□ -0.06
NUP58-206ENST00000463407 NCBP1Q09161 790 aaKnown RBP14.66□□□□□ -0.06
NUP58-206ENST00000463407 PHACTR2O75167 634 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 RLBP1P12271 317 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 DCTPP1Q9H773 170 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 RMND1Q9NWS8 449 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 MYO5CQ9NQX4 1742 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 UQCRHLA0A096LP55 91 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 UQCRHP07919 91 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 CTNNA2P26232 953 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 EAPPQ56P03 285 aaPredicted RBP14.65□□□□□ -0.06
NUP58-206ENST00000463407 H0YHG0 523 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 KIF5CO60282 957 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 TIMM10P62072 90 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 SP4Q02446 784 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 LEKR1Q6ZMV7 388 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 USO1O60763 962 aaKnown RBP14.65□□□□□ -0.06
NUP58-206ENST00000463407 UBE2HP62256 183 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 BCS1LQ9Y276 419 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 KRT2P35908 639 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 TRIM47Q96LD4 638 aa14.65□□□□□ -0.06
NUP58-206ENST00000463407 ERVV-2B6SEH9 535 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 EIF3JO75822 258 aaKnown RBP14.64□□□□□ -0.07
NUP58-206ENST00000463407 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 PDE6BP35913 854 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 SYKP43405 635 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 RRAGBQ5VZM2 374 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 XAGE2Q96GT9 111 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 ARHGEF10LQ9HCE6 1279 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 GPCPD1Q9NPB8 672 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
NUP58-206ENST00000463407 IL27Q8NEV9 243 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 TCHPQ9BT92 498 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
NUP58-206ENST00000463407 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
NUP58-206ENST00000463407 CALML3P27482 149 aa14.63□□□□□ -0.07
NUP58-206ENST00000463407 PTPN14Q15678 1187 aa14.63□□□□□ -0.07
NUP58-206ENST00000463407 TMEM94Q12767 1356 aa14.63□□□□□ -0.07
NUP58-206ENST00000463407 APOBRQ0VD83 1088 aa14.63□□□□□ -0.07
NUP58-206ENST00000463407 KRT13P13646 458 aa14.63□□□□□ -0.07
NUP58-206ENST00000463407 USP37Q86T82 979 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms