RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 BTAF1O14981 1849 aa15.32■□□□□ 0.04
VAPB-203ENST00000463370 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
VAPB-203ENST00000463370 TOB2Q14106 344 aaPredicted RBP15.32■□□□□ 0.04
VAPB-203ENST00000463370 PUS7LQ9H0K6 701 aaKnown RBP15.32■□□□□ 0.04
VAPB-203ENST00000463370 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 ZNF831Q5JPB2 1677 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
VAPB-203ENST00000463370 ONECUT3O60422 494 aaPredicted RBP15.31■□□□□ 0.04
VAPB-203ENST00000463370 RPS6KA4O75676 772 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 TTLL5Q6EMB2 1281 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 IL27Q8NEV9 243 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 LPIN2Q92539 896 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 PIH1D3Q9NQM4 214 aaKnown RBP15.31■□□□□ 0.04
VAPB-203ENST00000463370 ATRNO75882 1429 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
VAPB-203ENST00000463370 CCDC24Q8N4L8 307 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
VAPB-203ENST00000463370 NHSQ6T4R5 1651 aa15.3■□□□□ 0.04
VAPB-203ENST00000463370 WASHC4Q2M389 1173 aa15.3■□□□□ 0.04
VAPB-203ENST00000463370 DSCC1Q9BVC3 393 aa15.3■□□□□ 0.04
VAPB-203ENST00000463370 NARFQ9UHQ1 456 aa15.3■□□□□ 0.04
VAPB-203ENST00000463370 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
VAPB-203ENST00000463370 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
VAPB-203ENST00000463370 RTL9Q8NET4 1388 aa15.29■□□□□ 0.04
VAPB-203ENST00000463370 ARID4AP29374 1257 aaPredicted RBP15.29■□□□□ 0.04
VAPB-203ENST00000463370 FOXD4L6Q3SYB3 417 aaPredicted RBP15.29■□□□□ 0.04
VAPB-203ENST00000463370 FOXD4L3Q6VB84 417 aaPredicted RBP15.29■□□□□ 0.04
VAPB-203ENST00000463370 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
VAPB-203ENST00000463370 ARHGEF1Q92888 912 aaKnown RBP15.29■□□□□ 0.04
VAPB-203ENST00000463370 LRRC2Q9BYS8 371 aa15.29■□□□□ 0.04
VAPB-203ENST00000463370 LMBRD1Q9NUN5 540 aa15.29■□□□□ 0.04
VAPB-203ENST00000463370 TRPC5Q9UL62 973 aaPredicted RBP15.29■□□□□ 0.04
VAPB-203ENST00000463370 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
VAPB-203ENST00000463370 CHRNDQ07001 517 aa15.28■□□□□ 0.04
VAPB-203ENST00000463370 LRRC4BQ9NT99 713 aa15.28■□□□□ 0.04
VAPB-203ENST00000463370 SPEF2Q9C093 1822 aa15.28■□□□□ 0.04
VAPB-203ENST00000463370 PHF14O94880 888 aa15.28■□□□□ 0.04
VAPB-203ENST00000463370 BCAMP50895 628 aa15.27■□□□□ 0.04
VAPB-203ENST00000463370 RASGRF1Q13972 1273 aa15.27■□□□□ 0.04
VAPB-203ENST00000463370 KRT32Q14532 448 aa15.27■□□□□ 0.04
VAPB-203ENST00000463370 APPBP2Q92624 585 aa15.27■□□□□ 0.04
VAPB-203ENST00000463370 ZSCAN31Q96LW9 406 aaPredicted RBP15.27■□□□□ 0.04
VAPB-203ENST00000463370 QTRT2Q9H974 415 aaKnown RBP15.27■□□□□ 0.04
VAPB-203ENST00000463370 SH2B1Q9NRF2 756 aaPredicted RBP15.27■□□□□ 0.04
VAPB-203ENST00000463370 SMC3Q9UQE7 1217 aa15.27■□□□□ 0.04
VAPB-203ENST00000463370 RTCBQ9Y3I0 505 aaKnown RBP15.27■□□□□ 0.04
VAPB-203ENST00000463370 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.03
VAPB-203ENST00000463370 IDH1O75874 414 aaKnown RBP15.27■□□□□ 0.03
VAPB-203ENST00000463370 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.03
VAPB-203ENST00000463370 SLC5A1P13866 664 aa15.27■□□□□ 0.03
VAPB-203ENST00000463370 SYT1P21579 422 aa15.27■□□□□ 0.03
VAPB-203ENST00000463370 GJB2P29033 226 aa15.27■□□□□ 0.03
VAPB-203ENST00000463370 SLC9C2Q5TAH2 1124 aa15.27■□□□□ 0.03
VAPB-203ENST00000463370 ALDH8A1Q9H2A2 487 aaPredicted RBP15.27■□□□□ 0.03
VAPB-203ENST00000463370 WWC3Q9ULE0 1092 aa15.27■□□□□ 0.03
VAPB-203ENST00000463370 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.27■□□□□ 0.03
VAPB-203ENST00000463370 ZPR1O75312 459 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 PRPF40AO75400 957 aaKnown RBP15.26■□□□□ 0.03
VAPB-203ENST00000463370 ADD2P35612 726 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 STK3Q13188 491 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
VAPB-203ENST00000463370 Q6ZUG5 572 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
VAPB-203ENST00000463370 CELF1Q92879 486 aaKnown RBP15.26■□□□□ 0.03
VAPB-203ENST00000463370 SCN7AQ01118 1682 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 AKAP11Q9UKA4 1901 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 GPAA1O43292 621 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
VAPB-203ENST00000463370 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
VAPB-203ENST00000463370 SPATA5Q8NB90 893 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 SETDB2Q96T68 719 aa15.26■□□□□ 0.03
VAPB-203ENST00000463370 E7EWF7 191 aa15.25■□□□□ 0.03
VAPB-203ENST00000463370 HAND2P61296 217 aa15.25■□□□□ 0.03
VAPB-203ENST00000463370 FAM196AQ6ZSG2 479 aa15.25■□□□□ 0.03
VAPB-203ENST00000463370 FGAP02671 866 aa15.25■□□□□ 0.03
VAPB-203ENST00000463370 UQCRFS1P1P0C7P4 283 aa15.25■□□□□ 0.03
VAPB-203ENST00000463370 LRRFIP1Q32MZ4 808 aaKnown RBP15.25■□□□□ 0.03
VAPB-203ENST00000463370 NBPF5PQ86XG9 351 aaPredicted RBP15.25■□□□□ 0.03
VAPB-203ENST00000463370 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
VAPB-203ENST00000463370 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
VAPB-203ENST00000463370 ZNF532Q9HCE3 1301 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 LAMB2P55268 1798 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 STX6O43752 255 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 PDE6AP16499 860 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 ANKRD1Q15327 319 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 SKOR2Q2VWA4 1001 aaPredicted RBP15.24■□□□□ 0.03
VAPB-203ENST00000463370 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 CHST3Q7LGC8 479 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.24■□□□□ 0.03
VAPB-203ENST00000463370 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
VAPB-203ENST00000463370 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
VAPB-203ENST00000463370 TTF1Q15361 905 aaPredicted RBP15.24■□□□□ 0.03
VAPB-203ENST00000463370 SLC51AQ86UW1 340 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 ANKRD18AQ8IVF6 992 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 GPT2Q8TD30 523 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 BRF1Q92994 677 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
VAPB-203ENST00000463370 GDPD2Q9HCC8 539 aa15.24■□□□□ 0.03
VAPB-203ENST00000463370 PTMSP20962 102 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms