RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MTX1Q13505 466 aa16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 RFX5P48382 616 aaPredicted RBP16.32■□□□□ 0.2
R3HDM1-213ENST00000463230 RCAN3Q9UKA8 241 aa16.32■□□□□ 0.2
R3HDM1-213ENST00000463230 CIAO1O76071 339 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 GNAI2P04899 355 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 TMEM57Q8N5G2 664 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 AGBL3Q8NEM8 1001 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 USP17L3A6NCW0 530 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 USP17L4A6NCW7 530 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 USP17L1Q7RTZ2 530 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 ZNF804AQ7Z570 1209 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 CLUAP1Q96AJ1 413 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 MYO3BQ8WXR4 1341 aa16.31■□□□□ 0.2
R3HDM1-213ENST00000463230 EYA2O00167 538 aa16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 EPS15P42566 896 aa16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 APLP1P51693 650 aa16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 ZNF646O15015 1829 aaPredicted RBP16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 H7C1D1 291 aa16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 STRIP1Q5VSL9 837 aa16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 RSBN1LQ6PCB5 846 aaPredicted RBP16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 PUS3Q9BZE2 481 aaKnown RBP16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
R3HDM1-213ENST00000463230 TAF5LO75529 589 aa16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 METTL24Q5JXM2 366 aa16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 HELBQ8NG08 1087 aaPredicted RBP16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 COPRSQ9NQ92 184 aa16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 EAPPQ56P03 285 aaPredicted RBP16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 VGLL2Q8N8G2 317 aa16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 ZC3H15Q8WU90 426 aaKnown RBP16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 CNOT7Q9UIV1 285 aaKnown RBP16.29■□□□□ 0.2
R3HDM1-213ENST00000463230 PDE8BO95263 885 aa16.28■□□□□ 0.2
R3HDM1-213ENST00000463230 IL1R1P14778 569 aa16.28■□□□□ 0.2
R3HDM1-213ENST00000463230 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
R3HDM1-213ENST00000463230 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
R3HDM1-213ENST00000463230 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 FKBP1AP62942 108 aaKnown RBP16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 LRRC24Q50LG9 513 aa16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 MICALL2Q8IY33 904 aa16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 GMLQ99445 158 aa16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 CHMP4BQ9H444 224 aaKnown RBP16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 PGAP2Q9UHJ9 254 aa16.27■□□□□ 0.2
R3HDM1-213ENST00000463230 PLIN1O60240 522 aa16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 KLRK1P26718 216 aa16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 ZNF280AP59817 542 aaPredicted RBP16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 PUM3Q15397 648 aaKnown RBP16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 DACT2Q5SW24 774 aa16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 ITPRIPQ8IWB1 547 aa16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 CLEC11AQ9Y240 323 aa16.27■□□□□ 0.19
R3HDM1-213ENST00000463230 IL15P40933 162 aaPredicted RBP16.26■□□□□ 0.19
R3HDM1-213ENST00000463230 POTEIP0CG38 1075 aa16.26■□□□□ 0.19
R3HDM1-213ENST00000463230 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
R3HDM1-213ENST00000463230 RLBP1P12271 317 aa16.26■□□□□ 0.19
R3HDM1-213ENST00000463230 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
R3HDM1-213ENST00000463230 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
R3HDM1-213ENST00000463230 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
R3HDM1-213ENST00000463230 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
R3HDM1-213ENST00000463230 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
R3HDM1-213ENST00000463230 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
R3HDM1-213ENST00000463230 FGFR2P21802 821 aa16.25■□□□□ 0.19
R3HDM1-213ENST00000463230 HIBADHP31937 336 aaKnown RBP16.25■□□□□ 0.19
R3HDM1-213ENST00000463230 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
R3HDM1-213ENST00000463230 PASKQ96RG2 1323 aa16.24■□□□□ 0.19
R3HDM1-213ENST00000463230 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
R3HDM1-213ENST00000463230 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
R3HDM1-213ENST00000463230 CAVIN4Q5BKX8 364 aa16.24■□□□□ 0.19
R3HDM1-213ENST00000463230 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
R3HDM1-213ENST00000463230 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
R3HDM1-213ENST00000463230 SNAP23O00161 211 aa16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 ITGBL1O95965 494 aaPredicted RBP16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 SLC5A1P13866 664 aa16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 LPIN2Q92539 896 aa16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 ARAP2Q8WZ64 1704 aa16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 FAM84BQ96KN1 310 aaPredicted RBP16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
R3HDM1-213ENST00000463230 SASH1O94885 1247 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 GTF2IP78347 998 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 ATP8B2P98198 1209 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 KIF4BQ2VIQ3 1234 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 TRPM4Q8TD43 1214 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 POLA2Q14181 598 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 OGFOD1Q8N543 542 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 HDAC9Q9UKV0 1011 aa16.22■□□□□ 0.19
R3HDM1-213ENST00000463230 HIRAP54198 1017 aaPredicted RBP16.21■□□□□ 0.19
R3HDM1-213ENST00000463230 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
R3HDM1-213ENST00000463230 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
R3HDM1-213ENST00000463230 SIL1Q9H173 461 aa16.21■□□□□ 0.19
R3HDM1-213ENST00000463230 TRPM7Q96QT4 1865 aa16.21■□□□□ 0.19
R3HDM1-213ENST00000463230 ATP2B3Q16720 1220 aa16.21■□□□□ 0.18
R3HDM1-213ENST00000463230 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.18
R3HDM1-213ENST00000463230 FBXW7Q969H0 707 aa16.21■□□□□ 0.18
R3HDM1-213ENST00000463230 CREBZFQ9NS37 354 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms