RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 DCPSQ96C86 337 aaKnown RBP16.45■□□□□ 0.22
HDAC1-203ENST00000463172 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
HDAC1-203ENST00000463172 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
HDAC1-203ENST00000463172 USP17L8P0C7I0 530 aa16.44■□□□□ 0.22
HDAC1-203ENST00000463172 KIF4BQ2VIQ3 1234 aa16.44■□□□□ 0.22
HDAC1-203ENST00000463172 RBM26Q5T8P6 1007 aaKnown RBP16.44■□□□□ 0.22
HDAC1-203ENST00000463172 SAMD7Q7Z3H4 446 aa16.44■□□□□ 0.22
HDAC1-203ENST00000463172 NOB1Q9ULX3 412 aaKnown RBP16.44■□□□□ 0.22
HDAC1-203ENST00000463172 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
HDAC1-203ENST00000463172 A0A1B0GUL6 1792 aa16.43■□□□□ 0.22
HDAC1-203ENST00000463172 RARSP54136 660 aaKnown RBP16.43■□□□□ 0.22
HDAC1-203ENST00000463172 HIRAP54198 1017 aaPredicted RBP16.43■□□□□ 0.22
HDAC1-203ENST00000463172 DEFB115Q30KQ5 88 aa16.43■□□□□ 0.22
HDAC1-203ENST00000463172 RABL6Q3YEC7 729 aaPredicted RBP16.43■□□□□ 0.22
HDAC1-203ENST00000463172 C15orf52Q6ZUT6 534 aaKnown RBP16.43■□□□□ 0.22
HDAC1-203ENST00000463172 ARHGAP45Q92619 1136 aa16.43■□□□□ 0.22
HDAC1-203ENST00000463172 BICC1Q9H694 974 aaKnown RBP16.43■□□□□ 0.22
HDAC1-203ENST00000463172 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
HDAC1-203ENST00000463172 PLIN1O60240 522 aa16.42■□□□□ 0.22
HDAC1-203ENST00000463172 TAF5LO75529 589 aa16.42■□□□□ 0.22
HDAC1-203ENST00000463172 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
HDAC1-203ENST00000463172 ZNF280AP59817 542 aaPredicted RBP16.42■□□□□ 0.22
HDAC1-203ENST00000463172 TTLL5Q6EMB2 1281 aa16.42■□□□□ 0.22
HDAC1-203ENST00000463172 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
HDAC1-203ENST00000463172 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
HDAC1-203ENST00000463172 GLIS2Q9BZE0 524 aaPredicted RBP16.42■□□□□ 0.22
HDAC1-203ENST00000463172 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
HDAC1-203ENST00000463172 HDAC9Q9UKV0 1011 aa16.42■□□□□ 0.22
HDAC1-203ENST00000463172 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 RASSF10A6NK89 507 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 TRAF5O00463 557 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 CELF2O95319 508 aaKnown RBP16.41■□□□□ 0.22
HDAC1-203ENST00000463172 ECE1P42892 770 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 CD209Q9NNX6 404 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 MYOZ2Q9NPC6 264 aa16.41■□□□□ 0.22
HDAC1-203ENST00000463172 DACT2Q5SW24 774 aa16.4■□□□□ 0.22
HDAC1-203ENST00000463172 PAXIP1Q6ZW49 1069 aaPredicted RBP16.4■□□□□ 0.22
HDAC1-203ENST00000463172 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
HDAC1-203ENST00000463172 KAZALD1Q96I82 304 aa16.4■□□□□ 0.22
HDAC1-203ENST00000463172 ZNF408Q9H9D4 720 aa16.4■□□□□ 0.22
HDAC1-203ENST00000463172 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
HDAC1-203ENST00000463172 GTF2IP78347 998 aa16.39■□□□□ 0.21
HDAC1-203ENST00000463172 METTL24Q5JXM2 366 aa16.39■□□□□ 0.21
HDAC1-203ENST00000463172 USP48Q86UV5 1035 aa16.39■□□□□ 0.21
HDAC1-203ENST00000463172 ANKRD44Q8N8A2 993 aa16.39■□□□□ 0.21
HDAC1-203ENST00000463172 AIDAQ96BJ3 306 aa16.39■□□□□ 0.21
HDAC1-203ENST00000463172 GMLQ99445 158 aa16.39■□□□□ 0.21
HDAC1-203ENST00000463172 KLRK1P26718 216 aa16.38■□□□□ 0.21
HDAC1-203ENST00000463172 VEGFBP49765 207 aa16.38■□□□□ 0.21
HDAC1-203ENST00000463172 SCARF1Q14162 830 aa16.38■□□□□ 0.21
HDAC1-203ENST00000463172 VPS37DQ86XT2 251 aa16.38■□□□□ 0.21
HDAC1-203ENST00000463172 GGA3Q9NZ52 723 aa16.38■□□□□ 0.21
HDAC1-203ENST00000463172 TLL2Q9Y6L7 1015 aa16.38■□□□□ 0.21
HDAC1-203ENST00000463172 GNAI3P08754 354 aa16.37■□□□□ 0.21
HDAC1-203ENST00000463172 IL1R1P14778 569 aa16.37■□□□□ 0.21
HDAC1-203ENST00000463172 CAVIN4Q5BKX8 364 aa16.37■□□□□ 0.21
HDAC1-203ENST00000463172 CST9Q5W186 159 aa16.37■□□□□ 0.21
HDAC1-203ENST00000463172 PCNTO95613 3336 aa16.37■□□□□ 0.21
HDAC1-203ENST00000463172 PITPNM2Q9BZ72 1349 aa16.37■□□□□ 0.21
HDAC1-203ENST00000463172 EGFRP00533 1210 aa16.36■□□□□ 0.21
HDAC1-203ENST00000463172 HSPA1AP0DMV8 641 aaKnown RBP16.36■□□□□ 0.21
HDAC1-203ENST00000463172 HSPA1BP0DMV9 641 aaKnown RBP16.36■□□□□ 0.21
HDAC1-203ENST00000463172 HIBADHP31937 336 aaKnown RBP16.36■□□□□ 0.21
HDAC1-203ENST00000463172 FKBP1AP62942 108 aaKnown RBP16.36■□□□□ 0.21
HDAC1-203ENST00000463172 C2orf69Q8N8R5 385 aa16.36■□□□□ 0.21
HDAC1-203ENST00000463172 FRAT1Q92837 279 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-203ENST00000463172 HHIPL1Q96JK4 782 aa16.36■□□□□ 0.21
HDAC1-203ENST00000463172 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
HDAC1-203ENST00000463172 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
HDAC1-203ENST00000463172 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
HDAC1-203ENST00000463172 WDR33Q9C0J8 1336 aaKnown RBP16.36■□□□□ 0.21
HDAC1-203ENST00000463172 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
HDAC1-203ENST00000463172 SASH1O94885 1247 aa16.35■□□□□ 0.21
HDAC1-203ENST00000463172 PDE8BO95263 885 aa16.35■□□□□ 0.21
HDAC1-203ENST00000463172 MAP2K1Q02750 393 aaPredicted RBP16.35■□□□□ 0.21
HDAC1-203ENST00000463172 FMR1Q06787 632 aaKnown RBP eCLIP16.35■□□□□ 0.212e-7■□□□□ 8.6
HDAC1-203ENST00000463172 ANGEL2Q5VTE6 544 aaKnown RBP16.35■□□□□ 0.21
HDAC1-203ENST00000463172 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
HDAC1-203ENST00000463172 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
HDAC1-203ENST00000463172 KIAA0825Q8IV33 1275 aa16.35■□□□□ 0.21
HDAC1-203ENST00000463172 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
HDAC1-203ENST00000463172 PUS3Q9BZE2 481 aaKnown RBP16.35■□□□□ 0.21
HDAC1-203ENST00000463172 IRS2Q9Y4H2 1338 aa16.35■□□□□ 0.21
HDAC1-203ENST00000463172 ZNF646O15015 1829 aaPredicted RBP16.34■□□□□ 0.21
HDAC1-203ENST00000463172 SNAP23O00161 211 aa16.34■□□□□ 0.21
HDAC1-203ENST00000463172 EYA2O00167 538 aa16.34■□□□□ 0.21
HDAC1-203ENST00000463172 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
HDAC1-203ENST00000463172 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
HDAC1-203ENST00000463172 BEGAINQ9BUH8 593 aa16.34■□□□□ 0.21
HDAC1-203ENST00000463172 MXD3Q9BW11 206 aa16.34■□□□□ 0.21
HDAC1-203ENST00000463172 ADM5C9JUS6 153 aa16.33■□□□□ 0.2
HDAC1-203ENST00000463172 MYO1BO43795 1136 aa16.33■□□□□ 0.2
HDAC1-203ENST00000463172 NF2P35240 595 aa16.33■□□□□ 0.2
HDAC1-203ENST00000463172 GRM1Q13255 1194 aa16.33■□□□□ 0.2
HDAC1-203ENST00000463172 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.2
HDAC1-203ENST00000463172 DLGAP5Q15398 846 aa16.33■□□□□ 0.2
HDAC1-203ENST00000463172 LRRC24Q50LG9 513 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms