RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 SPRYD7Q5W111 196 aa15.1■□□□□ 0.01
PCCB-203ENST00000462542 SLC10A4Q96EP9 437 aa15.1■□□□□ 0.01
PCCB-203ENST00000462542 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
PCCB-203ENST00000462542 CHMP4AQ9BY43 222 aa15.1■□□□□ 0.01
PCCB-203ENST00000462542 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
PCCB-203ENST00000462542 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
PCCB-203ENST00000462542 UNCXA6NJT0 531 aa15.09■□□□□ 0.01
PCCB-203ENST00000462542 MKRN3Q13064 507 aaKnown RBP15.09■□□□□ 0.01
PCCB-203ENST00000462542 RALBP1Q15311 655 aa15.09■□□□□ 0.01
PCCB-203ENST00000462542 APOBEC3FQ8IUX4 373 aaKnown RBP15.09■□□□□ 0.01
PCCB-203ENST00000462542 MYD88Q99836 296 aa15.09■□□□□ 0.01
PCCB-203ENST00000462542 COA1Q9GZY4 146 aa15.09■□□□□ 0.01
PCCB-203ENST00000462542 R3HDMLQ9H3Y0 253 aa15.09■□□□□ 0.01
PCCB-203ENST00000462542 BSDC1Q9NW68 430 aaPredicted RBP15.09■□□□□ 0.01
PCCB-203ENST00000462542 MED23Q9ULK4 1368 aa15.09■□□□□ 0.01
PCCB-203ENST00000462542 RUNDC1Q96C34 613 aa15.08■□□□□ 0
PCCB-203ENST00000462542 MINPP1Q9UNW1 487 aa15.08■□□□□ 0
PCCB-203ENST00000462542 ZBTB48P10074 688 aaPredicted RBP15.07■□□□□ 0
PCCB-203ENST00000462542 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
PCCB-203ENST00000462542 TTLL5Q6EMB2 1281 aa15.07■□□□□ 0
PCCB-203ENST00000462542 OTOP1Q7RTM1 612 aa15.07■□□□□ 0
PCCB-203ENST00000462542 IFNL1Q8IU54 200 aa15.07■□□□□ 0
PCCB-203ENST00000462542 CCDC85AQ96PX6 553 aaPredicted RBP15.07■□□□□ 0
PCCB-203ENST00000462542 PHAXQ9H814 394 aaKnown RBP15.07■□□□□ 0
PCCB-203ENST00000462542 LEMD3Q9Y2U8 911 aa15.07■□□□□ 0
PCCB-203ENST00000462542 TRIM17Q9Y577 477 aa15.07■□□□□ 0
PCCB-203ENST00000462542 MKI67P46013 3256 aaKnown RBP15.07■□□□□ 0
PCCB-203ENST00000462542 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
PCCB-203ENST00000462542 PRKG1Q13976 671 aa15.06■□□□□ 0
PCCB-203ENST00000462542 MAP3K11Q16584 847 aa15.06■□□□□ 0
PCCB-203ENST00000462542 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
PCCB-203ENST00000462542 FBXW7Q969H0 707 aa15.06■□□□□ 0
PCCB-203ENST00000462542 ERO1AQ96HE7 468 aa15.06■□□□□ 0
PCCB-203ENST00000462542 METTL22Q9BUU2 404 aaPredicted RBP15.06■□□□□ 0
PCCB-203ENST00000462542 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
PCCB-203ENST00000462542 PPP1R12BO60237 982 aaPredicted RBP15.05■□□□□ -0
PCCB-203ENST00000462542 CCDC146Q8IYE0 955 aa15.05■□□□□ -0
PCCB-203ENST00000462542 TTLL11Q8NHH1 800 aa15.05■□□□□ -0
PCCB-203ENST00000462542 ZBED3Q96IU2 234 aaPredicted RBP15.05■□□□□ -0
PCCB-203ENST00000462542 MXD3Q9BW11 206 aa15.05■□□□□ -0
PCCB-203ENST00000462542 PTPN22Q9Y2R2 807 aa15.05■□□□□ -0
PCCB-203ENST00000462542 POTEFA5A3E0 1075 aa15.04■□□□□ -0
PCCB-203ENST00000462542 WTIPA6NIX2 430 aaPredicted RBP15.04■□□□□ -0
PCCB-203ENST00000462542 SASH1O94885 1247 aa15.04■□□□□ -0
PCCB-203ENST00000462542 CTSWP56202 376 aa15.04■□□□□ -0
PCCB-203ENST00000462542 SUPT20HL1Q3ZLR7 823 aa15.04■□□□□ -0
PCCB-203ENST00000462542 JARID2Q92833 1246 aaPredicted RBP15.04■□□□□ -0
PCCB-203ENST00000462542 DEFB129Q9H1M3 183 aa15.04■□□□□ -0
PCCB-203ENST00000462542 MBIPQ9NS73 344 aa15.04■□□□□ -0
PCCB-203ENST00000462542 CENPFP49454 3210 aa15.04■□□□□ -0
PCCB-203ENST00000462542 COL1A1P02452 1464 aaPredicted RBP15.03■□□□□ -0
PCCB-203ENST00000462542 HTTP42858 3142 aa15.03■□□□□ -0
PCCB-203ENST00000462542 ARMC5Q96C12 935 aa15.03■□□□□ -0
PCCB-203ENST00000462542 ANKRD2Q9GZV1 360 aa15.03■□□□□ -0
PCCB-203ENST00000462542 PPP2R3BQ9Y5P8 575 aa15.03■□□□□ -0
PCCB-203ENST00000462542 ZNF853P0CG23 659 aa15.02■□□□□ -0
PCCB-203ENST00000462542 GNAI1P63096 354 aa15.02■□□□□ -0
PCCB-203ENST00000462542 ARHGEF6Q15052 776 aa15.02■□□□□ -0
PCCB-203ENST00000462542 WDR43Q15061 677 aaKnown RBP eCLIP15.02■□□□□ -0
PCCB-203ENST00000462542 DLGAP5Q15398 846 aa15.02■□□□□ -0
PCCB-203ENST00000462542 KIAA0825Q8IV33 1275 aa15.02■□□□□ -0
PCCB-203ENST00000462542 MTMR14Q8NCE2 650 aa15.02■□□□□ -0
PCCB-203ENST00000462542 GREM2Q9H772 168 aa15.02■□□□□ -0
PCCB-203ENST00000462542 EFCC1Q9HA90 598 aa15.02■□□□□ -0
PCCB-203ENST00000462542 ZNF804BA4D1E1 1349 aa15.01□□□□□ -0.01
PCCB-203ENST00000462542 IGHMBP2P38935 993 aaKnown RBP15.01□□□□□ -0.01
PCCB-203ENST00000462542 GTF2IP78347 998 aa15.01□□□□□ -0.01
PCCB-203ENST00000462542 SP3Q02447 781 aa15.01□□□□□ -0.01
PCCB-203ENST00000462542 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
PCCB-203ENST00000462542 CCDC30Q5VVM6 783 aa15.01□□□□□ -0.01
PCCB-203ENST00000462542 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
PCCB-203ENST00000462542 WNK4Q96J92 1243 aa15.01□□□□□ -0.01
PCCB-203ENST00000462542 TMEM106CQ9BVX2 250 aa15.01□□□□□ -0.01
PCCB-203ENST00000462542 IGF2BP3O00425 579 aaKnown RBP eCLIP15□□□□□ -0.01
PCCB-203ENST00000462542 ELL2O00472 640 aaPredicted RBP15□□□□□ -0.01
PCCB-203ENST00000462542 MYO1BO43795 1136 aa15□□□□□ -0.01
PCCB-203ENST00000462542 EN2P19622 333 aaPredicted RBP15□□□□□ -0.01
PCCB-203ENST00000462542 FXR1P51114 621 aaKnown RBP eCLIP15□□□□□ -0.01
PCCB-203ENST00000462542 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
PCCB-203ENST00000462542 KSR2Q6VAB6 950 aa15□□□□□ -0.01
PCCB-203ENST00000462542 NBPF11Q86T75 865 aa15□□□□□ -0.01
PCCB-203ENST00000462542 IFT57Q9NWB7 429 aa15□□□□□ -0.01
PCCB-203ENST00000462542 MAP3K2Q9Y2U5 619 aa15□□□□□ -0.01
PCCB-203ENST00000462542 TESPA1A2RU30 521 aaPredicted RBP14.99□□□□□ -0.01
PCCB-203ENST00000462542 IREB2P48200 963 aaKnown RBP14.99□□□□□ -0.01
PCCB-203ENST00000462542 CRHR2Q13324 411 aa14.99□□□□□ -0.01
PCCB-203ENST00000462542 CD99L2Q8TCZ2 262 aa14.99□□□□□ -0.01
PCCB-203ENST00000462542 CLMNQ96JQ2 1002 aa14.99□□□□□ -0.01
PCCB-203ENST00000462542 ADAMTS8Q9UP79 889 aa14.99□□□□□ -0.01
PCCB-203ENST00000462542 KIAA0100Q14667 2235 aaKnown RBP14.98□□□□□ -0.01
PCCB-203ENST00000462542 PI4KAP2A4QPH2 592 aa14.98□□□□□ -0.01
PCCB-203ENST00000462542 IGKV5-2P06315 115 aa14.98□□□□□ -0.01
PCCB-203ENST00000462542 ANKRD13AQ8IZ07 590 aa14.98□□□□□ -0.01
PCCB-203ENST00000462542 PI4KAP1Q8N8J0 262 aa14.98□□□□□ -0.01
PCCB-203ENST00000462542 MPHOSPH8Q99549 860 aa14.98□□□□□ -0.01
PCCB-203ENST00000462542 CD209Q9NNX6 404 aa14.98□□□□□ -0.01
PCCB-203ENST00000462542 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
PCCB-203ENST00000462542 FZD1Q9UP38 647 aa14.98□□□□□ -0.01
PCCB-203ENST00000462542 RBBP6Q7Z6E9 1792 aaKnown RBP14.98□□□□□ -0.01
PCCB-203ENST00000462542 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms