RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 SNAP23O00161 211 aa23.7■■□□□ 1.38
SLC6A1-204ENST00000462473 UBTFL1P0CB47 393 aaPredicted RBP23.7■■□□□ 1.38
SLC6A1-204ENST00000462473 HIRAP54198 1017 aaPredicted RBP23.7■■□□□ 1.38
SLC6A1-204ENST00000462473 SAMD7Q7Z3H4 446 aa23.7■■□□□ 1.38
SLC6A1-204ENST00000462473 FBXW7Q969H0 707 aa23.7■■□□□ 1.38
SLC6A1-204ENST00000462473 TBC1D10BQ4KMP7 808 aaPredicted RBP23.69■■□□□ 1.38
SLC6A1-204ENST00000462473 RBM26Q5T8P6 1007 aaKnown RBP23.69■■□□□ 1.38
SLC6A1-204ENST00000462473 ZC3H15Q8WU90 426 aaKnown RBP23.69■■□□□ 1.38
SLC6A1-204ENST00000462473 PUS3Q9BZE2 481 aaKnown RBP23.69■■□□□ 1.38
SLC6A1-204ENST00000462473 TMEM88BA6NKF7 163 aa23.68■■□□□ 1.38
SLC6A1-204ENST00000462473 HDAC5Q9UQL6 1122 aa23.68■■□□□ 1.38
SLC6A1-204ENST00000462473 SCN9AQ15858 1988 aa23.68■■□□□ 1.38
SLC6A1-204ENST00000462473 C15orf52Q6ZUT6 534 aaKnown RBP23.67■■□□□ 1.38
SLC6A1-204ENST00000462473 PGAP2Q9UHJ9 254 aa23.67■■□□□ 1.38
SLC6A1-204ENST00000462473 TRIM27P14373 513 aa23.66■■□□□ 1.38
SLC6A1-204ENST00000462473 STRIP1Q5VSL9 837 aa23.66■■□□□ 1.38
SLC6A1-204ENST00000462473 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
SLC6A1-204ENST00000462473 ATF7IPQ6VMQ6 1270 aa23.66■■□□□ 1.38
SLC6A1-204ENST00000462473 CD209Q9NNX6 404 aa23.66■■□□□ 1.38
SLC6A1-204ENST00000462473 RIPOR2Q9Y4F9 1068 aa23.66■■□□□ 1.38
SLC6A1-204ENST00000462473 MROH5Q6ZUA9 1318 aa23.65■■□□□ 1.38
SLC6A1-204ENST00000462473 USP17L8P0C7I0 530 aa23.65■■□□□ 1.38
SLC6A1-204ENST00000462473 LRRC24Q50LG9 513 aa23.65■■□□□ 1.38
SLC6A1-204ENST00000462473 TTLL5Q6EMB2 1281 aa23.65■■□□□ 1.38
SLC6A1-204ENST00000462473 ZNF804AQ7Z570 1209 aa23.65■■□□□ 1.38
SLC6A1-204ENST00000462473 KLHDC4Q8TBB5 520 aa23.65■■□□□ 1.38
SLC6A1-204ENST00000462473 IRS2Q9Y4H2 1338 aa23.64■■□□□ 1.38
SLC6A1-204ENST00000462473 EGFRP00533 1210 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 FMR1Q06787 632 aaKnown RBP eCLIP23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 UBE4AQ14139 1066 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 KIF4BQ2VIQ3 1234 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 DACT2Q5SW24 774 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 ZKSCAN2Q63HK3 967 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 CLUAP1Q96AJ1 413 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 GMLQ99445 158 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 MEIS3Q99687 375 aa23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 GLIS2Q9BZE0 524 aaPredicted RBP23.64■■□□□ 1.37
SLC6A1-204ENST00000462473 MYO3BQ8WXR4 1341 aa23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 TRAF5O00463 557 aa23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 ZNF609O15014 1411 aa23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 GTF2IP78347 998 aa23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 METTL24Q5JXM2 366 aa23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 CDC37L1Q7L3B6 337 aa23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 MXD3Q9BW11 206 aa23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 MKRN1Q9UHC7 482 aaKnown RBP23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 LRRFIP2Q9Y608 721 aaKnown RBP23.63■■□□□ 1.37
SLC6A1-204ENST00000462473 ZNF280AP59817 542 aaPredicted RBP23.62■■□□□ 1.37
SLC6A1-204ENST00000462473 TNNQ9UQP3 1299 aa23.62■■□□□ 1.37
SLC6A1-204ENST00000462473 GNAI3P08754 354 aa23.61■■□□□ 1.37
SLC6A1-204ENST00000462473 RFX5P48382 616 aaPredicted RBP23.61■■□□□ 1.37
SLC6A1-204ENST00000462473 OGFOD1Q8N543 542 aa23.61■■□□□ 1.37
SLC6A1-204ENST00000462473 DCPSQ96C86 337 aaKnown RBP23.61■■□□□ 1.37
SLC6A1-204ENST00000462473 MYOZ2Q9NPC6 264 aa23.61■■□□□ 1.37
SLC6A1-204ENST00000462473 USP48Q86UV5 1035 aa23.6■■□□□ 1.37
SLC6A1-204ENST00000462473 ABT1Q9ULW3 272 aaKnown RBP23.6■■□□□ 1.37
SLC6A1-204ENST00000462473 PSME4Q14997 1843 aa23.59■■□□□ 1.37
SLC6A1-204ENST00000462473 EYA2O00167 538 aa23.59■■□□□ 1.37
SLC6A1-204ENST00000462473 IL1R1P14778 569 aa23.59■■□□□ 1.37
SLC6A1-204ENST00000462473 PTPN12Q05209 780 aaKnown RBP23.59■■□□□ 1.37
SLC6A1-204ENST00000462473 JMYQ8N9B5 988 aa23.59■■□□□ 1.37
SLC6A1-204ENST00000462473 PDE8BO95263 885 aa23.58■■□□□ 1.37
SLC6A1-204ENST00000462473 HIBADHP31937 336 aaKnown RBP23.58■■□□□ 1.37
SLC6A1-204ENST00000462473 GYG1P46976 350 aa23.58■■□□□ 1.37
SLC6A1-204ENST00000462473 SCARF1Q14162 830 aa23.58■■□□□ 1.37
SLC6A1-204ENST00000462473 A0A1B0GUL6 1792 aa23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 CELF2O95319 508 aaKnown RBP23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 CST9Q5W186 159 aa23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 KRT26Q7Z3Y9 468 aa23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 KIAA0825Q8IV33 1275 aa23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 FAM84BQ96KN1 310 aaPredicted RBP23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 GGA3Q9NZ52 723 aa23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 HDAC9Q9UKV0 1011 aa23.57■■□□□ 1.36
SLC6A1-204ENST00000462473 CNTNAP1P78357 1384 aa23.56■■□□□ 1.36
SLC6A1-204ENST00000462473 MMP14P50281 582 aa23.56■■□□□ 1.36
SLC6A1-204ENST00000462473 VPS37DQ86XT2 251 aa23.56■■□□□ 1.36
SLC6A1-204ENST00000462473 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
SLC6A1-204ENST00000462473 VGLL2Q8N8G2 317 aa23.56■■□□□ 1.36
SLC6A1-204ENST00000462473 SIL1Q9H173 461 aa23.56■■□□□ 1.36
SLC6A1-204ENST00000462473 ZNF408Q9H9D4 720 aa23.56■■□□□ 1.36
SLC6A1-204ENST00000462473 SASH1O94885 1247 aa23.55■■□□□ 1.36
SLC6A1-204ENST00000462473 DEFB115Q30KQ5 88 aa23.55■■□□□ 1.36
SLC6A1-204ENST00000462473 SULF1Q8IWU6 871 aa23.55■■□□□ 1.36
SLC6A1-204ENST00000462473 FTSJ3Q8IY81 847 aaKnown RBP23.55■■□□□ 1.36
SLC6A1-204ENST00000462473 FBXO3Q9UK99 471 aa23.55■■□□□ 1.36
SLC6A1-204ENST00000462473 JAG2Q9Y219 1238 aa23.55■■□□□ 1.36
SLC6A1-204ENST00000462473 ASTN2O75129 1339 aaPredicted RBP23.55■■□□□ 1.36
SLC6A1-204ENST00000462473 RASSF10A6NK89 507 aa23.54■■□□□ 1.36
SLC6A1-204ENST00000462473 PUM3Q15397 648 aaKnown RBP23.54■■□□□ 1.36
SLC6A1-204ENST00000462473 CAVIN4Q5BKX8 364 aa23.54■■□□□ 1.36
SLC6A1-204ENST00000462473 ANGEL2Q5VTE6 544 aaKnown RBP23.54■■□□□ 1.36
SLC6A1-204ENST00000462473 TDRD7Q8NHU6 1098 aaKnown RBP23.54■■□□□ 1.36
SLC6A1-204ENST00000462473 CEP350Q5VT06 3117 aa23.54■■□□□ 1.36
SLC6A1-204ENST00000462473 ADM5C9JUS6 153 aa23.53■■□□□ 1.36
SLC6A1-204ENST00000462473 GNAI2P04899 355 aa23.53■■□□□ 1.36
SLC6A1-204ENST00000462473 IFIT1P09914 478 aaKnown RBP23.53■■□□□ 1.36
SLC6A1-204ENST00000462473 DLK2Q6UY11 383 aa23.53■■□□□ 1.36
SLC6A1-204ENST00000462473 ATG9AQ7Z3C6 839 aa23.53■■□□□ 1.36
SLC6A1-204ENST00000462473 DZIP1LQ8IYY4 767 aaKnown RBP23.53■■□□□ 1.36
SLC6A1-204ENST00000462473 CERS5Q8N5B7 392 aa23.53■■□□□ 1.36
SLC6A1-204ENST00000462473 SRGAP3O43295 1099 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms