RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 NF2P35240 595 aa11.16□□□□□ -0.62
DDX39B-216ENST00000462421 ECE1P42892 770 aa11.16□□□□□ -0.62
DDX39B-216ENST00000462421 RARSP54136 660 aaKnown RBP11.16□□□□□ -0.62
DDX39B-216ENST00000462421 CASP7P55210 303 aa11.16□□□□□ -0.62
DDX39B-216ENST00000462421 FOXO4P98177 505 aa11.16□□□□□ -0.62
DDX39B-216ENST00000462421 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
DDX39B-216ENST00000462421 ZKSCAN2Q63HK3 967 aa11.16□□□□□ -0.62
DDX39B-216ENST00000462421 TTLL5Q6EMB2 1281 aa11.16□□□□□ -0.62
DDX39B-216ENST00000462421 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
DDX39B-216ENST00000462421 LRRC37AA6NMS7 1700 aa11.15□□□□□ -0.62
DDX39B-216ENST00000462421 YDJCA8MPS7 323 aa11.15□□□□□ -0.62
DDX39B-216ENST00000462421 VIL1P09327 827 aaKnown RBP11.15□□□□□ -0.62
DDX39B-216ENST00000462421 IFIT1P09914 478 aaKnown RBP11.15□□□□□ -0.62
DDX39B-216ENST00000462421 NBPF7P0C2Y1 421 aaPredicted RBP11.15□□□□□ -0.62
DDX39B-216ENST00000462421 POTEIP0CG38 1075 aa11.15□□□□□ -0.62
DDX39B-216ENST00000462421 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
DDX39B-216ENST00000462421 UBE4AQ14139 1066 aa11.15□□□□□ -0.62
DDX39B-216ENST00000462421 STRIP1Q5VSL9 837 aa11.15□□□□□ -0.62
DDX39B-216ENST00000462421 KRT26Q7Z3Y9 468 aa11.15□□□□□ -0.62
DDX39B-216ENST00000462421 TRMT2AQ8IZ69 625 aaKnown RBP11.15□□□□□ -0.62
DDX39B-216ENST00000462421 TAF5LO75529 589 aa11.14□□□□□ -0.63
DDX39B-216ENST00000462421 CELF2O95319 508 aaKnown RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 SLC5A1P13866 664 aa11.14□□□□□ -0.63
DDX39B-216ENST00000462421 RBM5P52756 815 aaKnown RBP eCLIP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 BRPF1P55201 1214 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 GRM1Q13255 1194 aa11.14□□□□□ -0.63
DDX39B-216ENST00000462421 ATF7IPQ6VMQ6 1270 aa11.14□□□□□ -0.63
DDX39B-216ENST00000462421 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
DDX39B-216ENST00000462421 C2orf69Q8N8R5 385 aa11.14□□□□□ -0.63
DDX39B-216ENST00000462421 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 HELBQ8NG08 1087 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 GNL3LQ9NVN8 582 aaKnown RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
DDX39B-216ENST00000462421 UTYO14607 1347 aa11.13□□□□□ -0.63
DDX39B-216ENST00000462421 HIBADHP31937 336 aaKnown RBP11.13□□□□□ -0.63
DDX39B-216ENST00000462421 GTF2IP78347 998 aa11.13□□□□□ -0.63
DDX39B-216ENST00000462421 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-216ENST00000462421 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-216ENST00000462421 DEFB115Q30KQ5 88 aa11.13□□□□□ -0.63
DDX39B-216ENST00000462421 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
DDX39B-216ENST00000462421 MYOZ2Q9NPC6 264 aa11.13□□□□□ -0.63
DDX39B-216ENST00000462421 MYH3P11055 1940 aa11.13□□□□□ -0.63
DDX39B-216ENST00000462421 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 GNAI2P04899 355 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 KCNA4P22459 653 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 HTRA3P83110 453 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
DDX39B-216ENST00000462421 DLGAP5Q15398 846 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 ITPRIPQ8IWB1 547 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 CLUAP1Q96AJ1 413 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 CD209Q9NNX6 404 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 GGA3Q9NZ52 723 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
DDX39B-216ENST00000462421 PASKQ96RG2 1323 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 COL4A5P29400 1685 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 SCARF1Q14162 830 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 RABL6Q3YEC7 729 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-216ENST00000462421 EPHA10Q5JZY3 1008 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 APOBEC3FQ8IUX4 373 aaKnown RBP11.11□□□□□ -0.63
DDX39B-216ENST00000462421 KIAA0825Q8IV33 1275 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 TRPM4Q8TD43 1214 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 TBC1D22AQ8WUA7 517 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 USP44Q9H0E7 712 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 SIL1Q9H173 461 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 TMOD2Q9NZR1 351 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 AKAP2Q9Y2D5 859 aa11.11□□□□□ -0.63
DDX39B-216ENST00000462421 LRRFIP2Q9Y608 721 aaKnown RBP11.11□□□□□ -0.63
DDX39B-216ENST00000462421 MAST3O60307 1309 aa11.1□□□□□ -0.63
DDX39B-216ENST00000462421 EYA2O00167 538 aa11.1□□□□□ -0.63
DDX39B-216ENST00000462421 SRGAP3O43295 1099 aa11.1□□□□□ -0.63
DDX39B-216ENST00000462421 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-216ENST00000462421 MAP2K1Q02750 393 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-216ENST00000462421 CHAF1AQ13111 956 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-216ENST00000462421 TNFAIP1Q13829 316 aa11.1□□□□□ -0.63
DDX39B-216ENST00000462421 INTS3Q68E01 1043 aaKnown RBP11.1□□□□□ -0.63
DDX39B-216ENST00000462421 C15orf52Q6ZUT6 534 aaKnown RBP11.1□□□□□ -0.63
DDX39B-216ENST00000462421 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
DDX39B-216ENST00000462421 GLIS2Q9BZE0 524 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-216ENST00000462421 CNTNAP1P78357 1384 aa11.1□□□□□ -0.63
DDX39B-216ENST00000462421 PITPNM2Q9BZ72 1349 aa11.09□□□□□ -0.63
DDX39B-216ENST00000462421 F8W031 263 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-216ENST00000462421 BCAR3O75815 825 aa11.09□□□□□ -0.63
DDX39B-216ENST00000462421 CIAO1O76071 339 aa11.09□□□□□ -0.63
DDX39B-216ENST00000462421 PDE8BO95263 885 aa11.09□□□□□ -0.63
DDX39B-216ENST00000462421 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-216ENST00000462421 IL15P40933 162 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-216ENST00000462421 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-216ENST00000462421 FKBP1AP62942 108 aaKnown RBP11.09□□□□□ -0.63
DDX39B-216ENST00000462421 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX39B-216ENST00000462421 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
DDX39B-216ENST00000462421 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
DDX39B-216ENST00000462421 LPIN2Q92539 896 aa11.09□□□□□ -0.63
DDX39B-216ENST00000462421 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
DDX39B-216ENST00000462421 TRAF5O00463 557 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 SASH1O94885 1247 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms