RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 LRRFIP2Q9Y608 721 aaKnown RBP12.7□□□□□ -0.38
SYN3-206ENST00000461446 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
SYN3-206ENST00000461446 ANKRD18BA2A2Z9 1011 aa12.69□□□□□ -0.38
SYN3-206ENST00000461446 HIRAP54198 1017 aaPredicted RBP12.69□□□□□ -0.38
SYN3-206ENST00000461446 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
SYN3-206ENST00000461446 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
SYN3-206ENST00000461446 TXNRD3Q86VQ6 643 aa12.69□□□□□ -0.38
SYN3-206ENST00000461446 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
SYN3-206ENST00000461446 TRPM4Q8TD43 1214 aa12.69□□□□□ -0.38
SYN3-206ENST00000461446 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
SYN3-206ENST00000461446 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
SYN3-206ENST00000461446 SNAP23O00161 211 aa12.68□□□□□ -0.38
SYN3-206ENST00000461446 TRAF5O00463 557 aa12.68□□□□□ -0.38
SYN3-206ENST00000461446 KLRK1P26718 216 aa12.68□□□□□ -0.38
SYN3-206ENST00000461446 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
SYN3-206ENST00000461446 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
SYN3-206ENST00000461446 HELBQ8NG08 1087 aaPredicted RBP12.68□□□□□ -0.38
SYN3-206ENST00000461446 CHMP4BQ9H444 224 aaKnown RBP12.68□□□□□ -0.38
SYN3-206ENST00000461446 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
SYN3-206ENST00000461446 ZBTB40Q9NUA8 1239 aa12.68□□□□□ -0.38
SYN3-206ENST00000461446 H7C1D1 291 aa12.67□□□□□ -0.38
SYN3-206ENST00000461446 TAF5LO75529 589 aa12.67□□□□□ -0.38
SYN3-206ENST00000461446 EGFRP00533 1210 aa12.67□□□□□ -0.38
SYN3-206ENST00000461446 VIL1P09327 827 aaKnown RBP12.67□□□□□ -0.38
SYN3-206ENST00000461446 CHRNDQ07001 517 aa12.67□□□□□ -0.38
SYN3-206ENST00000461446 MTX1Q13505 466 aa12.67□□□□□ -0.38
SYN3-206ENST00000461446 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
SYN3-206ENST00000461446 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
SYN3-206ENST00000461446 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 TBC1D10BQ4KMP7 808 aaPredicted RBP12.66□□□□□ -0.38
SYN3-206ENST00000461446 DPF2Q92785 391 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 ANKRD2Q9GZV1 360 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 LEMD3Q9Y2U8 911 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 MED23Q9ULK4 1368 aa12.66□□□□□ -0.38
SYN3-206ENST00000461446 KCNJ4P48050 445 aa12.65□□□□□ -0.38
SYN3-206ENST00000461446 ATP8B2P98198 1209 aa12.65□□□□□ -0.38
SYN3-206ENST00000461446 TAF7LQ5H9L4 462 aa12.65□□□□□ -0.38
SYN3-206ENST00000461446 DLK2Q6UY11 383 aa12.65□□□□□ -0.38
SYN3-206ENST00000461446 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
SYN3-206ENST00000461446 CRBNQ96SW2 442 aa12.65□□□□□ -0.38
SYN3-206ENST00000461446 GLIS2Q9BZE0 524 aaPredicted RBP12.65□□□□□ -0.38
SYN3-206ENST00000461446 USP17L3A6NCW0 530 aa12.64□□□□□ -0.39
SYN3-206ENST00000461446 USP17L4A6NCW7 530 aa12.64□□□□□ -0.39
SYN3-206ENST00000461446 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
SYN3-206ENST00000461446 RPS12P25398 132 aaKnown RBP12.64□□□□□ -0.39
SYN3-206ENST00000461446 RFX5P48382 616 aaPredicted RBP12.64□□□□□ -0.39
SYN3-206ENST00000461446 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
SYN3-206ENST00000461446 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
SYN3-206ENST00000461446 USP17L1Q7RTZ2 530 aa12.64□□□□□ -0.39
SYN3-206ENST00000461446 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
SYN3-206ENST00000461446 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
SYN3-206ENST00000461446 PGAP2Q9UHJ9 254 aa12.64□□□□□ -0.39
SYN3-206ENST00000461446 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
SYN3-206ENST00000461446 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
SYN3-206ENST00000461446 CST9Q5W186 159 aa12.63□□□□□ -0.39
SYN3-206ENST00000461446 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
SYN3-206ENST00000461446 FBXW7Q969H0 707 aa12.63□□□□□ -0.39
SYN3-206ENST00000461446 COA1Q9GZY4 146 aa12.63□□□□□ -0.39
SYN3-206ENST00000461446 CNNM1Q9NRU3 951 aa12.63□□□□□ -0.39
SYN3-206ENST00000461446 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
SYN3-206ENST00000461446 IRS2Q9Y4H2 1338 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 POLA2Q14181 598 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 KIF4BQ2VIQ3 1234 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 DACT2Q5SW24 774 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 USP48Q86UV5 1035 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
SYN3-206ENST00000461446 AGBL3Q8NEM8 1001 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
SYN3-206ENST00000461446 GMLQ99445 158 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 COPRSQ9NQ92 184 aa12.62□□□□□ -0.39
SYN3-206ENST00000461446 ABT1Q9ULW3 272 aaKnown RBP12.62□□□□□ -0.39
SYN3-206ENST00000461446 CNTNAP1P78357 1384 aa12.61□□□□□ -0.39
SYN3-206ENST00000461446 NEFLP07196 543 aa12.61□□□□□ -0.39
SYN3-206ENST00000461446 USP17L8P0C7I0 530 aa12.61□□□□□ -0.39
SYN3-206ENST00000461446 ZNF280AP59817 542 aaPredicted RBP12.61□□□□□ -0.39
SYN3-206ENST00000461446 CDC37L1Q7L3B6 337 aa12.61□□□□□ -0.39
SYN3-206ENST00000461446 CD209Q9NNX6 404 aa12.61□□□□□ -0.39
SYN3-206ENST00000461446 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
SYN3-206ENST00000461446 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
SYN3-206ENST00000461446 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
SYN3-206ENST00000461446 PSME4Q14997 1843 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 EYA2O00167 538 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 CELF2O95319 508 aaKnown RBP12.6□□□□□ -0.39
SYN3-206ENST00000461446 VEGFBP49765 207 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 GTF2IP78347 998 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 AAMPQ13685 434 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 STRIP1Q5VSL9 837 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 SIRT2Q8IXJ6 389 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 ZNF408Q9H9D4 720 aa12.6□□□□□ -0.39
SYN3-206ENST00000461446 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
SYN3-206ENST00000461446 PCNTO95613 3336 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms