RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 HSPA4P34932 840 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 MCM2P49736 904 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 RBM6P78332 1123 aaKnown RBP8.16□□□□□ -1.1
MSH2-204ENST00000461394 PTH1RQ03431 593 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 PUM3Q15397 648 aaKnown RBP8.16□□□□□ -1.1
MSH2-204ENST00000461394 RNF20Q5VTR2 975 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 ANKRD18AQ8IVF6 992 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 KBTBD3Q8NAB2 608 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.16□□□□□ -1.1
MSH2-204ENST00000461394 IL25Q9H293 177 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 SEC31BQ9NQW1 1179 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 PALD1Q9ULE6 856 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 RIPOR2Q9Y4F9 1068 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 RBM8AQ9Y5S9 174 aaKnown RBP8.16□□□□□ -1.1
MSH2-204ENST00000461394 TAF1P21675 1872 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 UBR3Q6ZT12 1888 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 TAF5LO75529 589 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 PDE8BO95263 885 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 UQCRFS1P1P0C7P4 283 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 NFKBIBQ15653 356 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 E2F4Q16254 413 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 WASHC4Q2M389 1173 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 MCMDC2Q4G0Z9 681 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 RASEFQ8IZ41 740 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 JAKMIP1Q96N16 626 aaKnown RBP8.15□□□□□ -1.1
MSH2-204ENST00000461394 NLRP3Q96P20 1036 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 UPF3BQ9BZI7 483 aaKnown RBP8.15□□□□□ -1.1
MSH2-204ENST00000461394 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.15□□□□□ -1.1
MSH2-204ENST00000461394 SNX14Q9Y5W7 946 aa8.15□□□□□ -1.1
MSH2-204ENST00000461394 A0A1B0GUL6 1792 aa8.15□□□□□ -1.11
MSH2-204ENST00000461394 ABCC12Q96J65 1359 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 MYH13Q9UKX3 1938 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 RNF113AO15541 343 aaKnown RBP8.14□□□□□ -1.11
MSH2-204ENST00000461394 CASTP20810 708 aaKnown RBP8.14□□□□□ -1.11
MSH2-204ENST00000461394 HMGB2P26583 209 aaKnown RBP8.14□□□□□ -1.11
MSH2-204ENST00000461394 PSMA5P28066 241 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 RXRBP28702 533 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 ZAP70P43403 619 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 SLC27A3Q5K4L6 730 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 ZSCAN25Q6NSZ9 544 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 CCDC129Q6ZRS4 1044 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 CCDC24Q8N4L8 307 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 SPDYE1Q8NFV5 336 aaPredicted RBP8.14□□□□□ -1.11
MSH2-204ENST00000461394 LPIN2Q92539 896 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 BCL2L12Q9HB09 334 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 HELLSQ9NRZ9 838 aa8.14□□□□□ -1.11
MSH2-204ENST00000461394 MYO5AQ9Y4I1 1855 aaKnown RBP8.13□□□□□ -1.11
MSH2-204ENST00000461394 CARMIL3Q8ND23 1372 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 RTL9Q8NET4 1388 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 MED23Q9ULK4 1368 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
MSH2-204ENST00000461394 SLC27A2O14975 620 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 FRAT2O75474 233 aaPredicted RBP8.13□□□□□ -1.11
MSH2-204ENST00000461394 ZMYND10O75800 440 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 SSFA2P28290 1259 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 ST5P78524 1137 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 CHRNDQ07001 517 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
MSH2-204ENST00000461394 ZNF589Q86UQ0 364 aaPredicted RBP8.13□□□□□ -1.11
MSH2-204ENST00000461394 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 SEC62Q99442 399 aaKnown RBP8.13□□□□□ -1.11
MSH2-204ENST00000461394 ANTXR1Q9H6X2 564 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 CREBZFQ9NS37 354 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 CYP46A1Q9Y6A2 500 aa8.13□□□□□ -1.11
MSH2-204ENST00000461394 AKAP11Q9UKA4 1901 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 SEMA3EO15041 775 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 IDH1O75874 414 aaKnown RBP8.12□□□□□ -1.11
MSH2-204ENST00000461394 APBA3O96018 575 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 ZFYP08048 801 aaPredicted RBP8.12□□□□□ -1.11
MSH2-204ENST00000461394 PHKA1P46020 1223 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
MSH2-204ENST00000461394 SF3B3Q15393 1217 aaKnown RBP8.12□□□□□ -1.11
MSH2-204ENST00000461394 ZMYM1Q5SVZ6 1142 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 CCDC102BQ68D86 513 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 BLOC1S2Q6QNY1 142 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 C3orf67Q6ZVT6 689 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 ZNF467Q7Z7K2 595 aaPredicted RBP8.12□□□□□ -1.11
MSH2-204ENST00000461394 VGLL2Q8N8G2 317 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 CNBD1Q8NA66 436 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 MAP4K1Q92918 833 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 LRRC4BQ9NT99 713 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 GNL3LQ9NVN8 582 aaKnown RBP8.12□□□□□ -1.11
MSH2-204ENST00000461394 HMG20BQ9P0W2 317 aa8.12□□□□□ -1.11
MSH2-204ENST00000461394 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
MSH2-204ENST00000461394 LAMA4Q16363 1823 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 M0R2C6 588 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 CHGBP05060 677 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 CPA1P15085 419 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 MCAMP43121 646 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 FGD1P98174 961 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 SCARF1Q14162 830 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 KRT32Q14532 448 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 NFIXQ14938 502 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 TXNRD1Q16881 649 aa8.11□□□□□ -1.11
MSH2-204ENST00000461394 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms