RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
C9orf78-202ENST00000461349 MYH3P11055 1940 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 ZBTB48P10074 688 aaPredicted RBP16.59■□□□□ 0.25
C9orf78-202ENST00000461349 ATP2B4P23634 1241 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 RIPK4P57078 832 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 LDLRAD1Q5T700 205 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 FBXW7Q969H0 707 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 ARMC5Q96C12 935 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 SLC10A4Q96EP9 437 aa16.59■□□□□ 0.25
C9orf78-202ENST00000461349 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.59■□□□□ 0.25
C9orf78-202ENST00000461349 MMP14P50281 582 aa16.58■□□□□ 0.24
C9orf78-202ENST00000461349 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.24
C9orf78-202ENST00000461349 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
C9orf78-202ENST00000461349 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
C9orf78-202ENST00000461349 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
C9orf78-202ENST00000461349 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.24
C9orf78-202ENST00000461349 COL1A1P02452 1464 aaPredicted RBP16.58■□□□□ 0.24
C9orf78-202ENST00000461349 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
C9orf78-202ENST00000461349 SASH1O94885 1247 aa16.57■□□□□ 0.24
C9orf78-202ENST00000461349 TRIM28Q13263 835 aaKnown RBP16.57■□□□□ 0.24
C9orf78-202ENST00000461349 ANKRD18AQ8IVF6 992 aa16.57■□□□□ 0.24
C9orf78-202ENST00000461349 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
C9orf78-202ENST00000461349 DACT2Q5SW24 774 aa16.56■□□□□ 0.24
C9orf78-202ENST00000461349 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
C9orf78-202ENST00000461349 HYPKQ9NX55 129 aa16.56■□□□□ 0.24
C9orf78-202ENST00000461349 CEP290O15078 2479 aa16.56■□□□□ 0.24
C9orf78-202ENST00000461349 TRIOBPQ9H2D6 2365 aa16.55■□□□□ 0.24
C9orf78-202ENST00000461349 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
C9orf78-202ENST00000461349 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
C9orf78-202ENST00000461349 PDE8AO60658 829 aa16.55■□□□□ 0.24
C9orf78-202ENST00000461349 SP3Q02447 781 aa16.55■□□□□ 0.24
C9orf78-202ENST00000461349 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
C9orf78-202ENST00000461349 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
C9orf78-202ENST00000461349 WNK4Q96J92 1243 aa16.55■□□□□ 0.24
C9orf78-202ENST00000461349 MXD3Q9BW11 206 aa16.55■□□□□ 0.24
C9orf78-202ENST00000461349 CRHR2Q13324 411 aa16.54■□□□□ 0.24
C9orf78-202ENST00000461349 ARHGEF6Q15052 776 aa16.54■□□□□ 0.24
C9orf78-202ENST00000461349 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
C9orf78-202ENST00000461349 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
C9orf78-202ENST00000461349 UNCXA6NJT0 531 aa16.53■□□□□ 0.24
C9orf78-202ENST00000461349 HOXB7P09629 217 aa16.53■□□□□ 0.24
C9orf78-202ENST00000461349 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
C9orf78-202ENST00000461349 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
C9orf78-202ENST00000461349 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
C9orf78-202ENST00000461349 ZNF333Q96JL9 665 aa16.53■□□□□ 0.24
C9orf78-202ENST00000461349 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
C9orf78-202ENST00000461349 FZD1Q9UP38 647 aa16.53■□□□□ 0.24
C9orf78-202ENST00000461349 LAS1LQ9Y4W2 734 aaKnown RBP16.53■□□□□ 0.24
C9orf78-202ENST00000461349 DLL1O00548 723 aa16.52■□□□□ 0.24
C9orf78-202ENST00000461349 MAP3K11Q16584 847 aa16.52■□□□□ 0.24
C9orf78-202ENST00000461349 COA1Q9GZY4 146 aa16.52■□□□□ 0.24
C9orf78-202ENST00000461349 DEFB129Q9H1M3 183 aa16.52■□□□□ 0.24
C9orf78-202ENST00000461349 SZT2Q5T011 3432 aa16.52■□□□□ 0.23
C9orf78-202ENST00000461349 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
C9orf78-202ENST00000461349 H0YGN5 161 aa16.51■□□□□ 0.23
C9orf78-202ENST00000461349 PCCAP05165 728 aaPredicted RBP16.51■□□□□ 0.23
C9orf78-202ENST00000461349 TMPOP42166 694 aaKnown RBP16.51■□□□□ 0.23
C9orf78-202ENST00000461349 KIAA0825Q8IV33 1275 aa16.51■□□□□ 0.23
C9orf78-202ENST00000461349 CLMNQ96JQ2 1002 aa16.51■□□□□ 0.23
C9orf78-202ENST00000461349 PPP2R3BQ9Y5P8 575 aa16.51■□□□□ 0.23
C9orf78-202ENST00000461349 CHL1O00533 1208 aa16.5■□□□□ 0.23
C9orf78-202ENST00000461349 CCT4P50991 539 aaKnown RBP16.5■□□□□ 0.23
C9orf78-202ENST00000461349 SUPT20HL1Q3ZLR7 823 aa16.5■□□□□ 0.23
C9orf78-202ENST00000461349 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
C9orf78-202ENST00000461349 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
C9orf78-202ENST00000461349 SLC17A8Q8NDX2 589 aa16.5■□□□□ 0.23
C9orf78-202ENST00000461349 MYD88Q99836 296 aa16.5■□□□□ 0.23
C9orf78-202ENST00000461349 SSC5DA1L4H1 1573 aa16.49■□□□□ 0.23
C9orf78-202ENST00000461349 IREB2P48200 963 aaKnown RBP16.49■□□□□ 0.23
C9orf78-202ENST00000461349 DLGAP5Q15398 846 aa16.49■□□□□ 0.23
C9orf78-202ENST00000461349 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
C9orf78-202ENST00000461349 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
C9orf78-202ENST00000461349 CWC25Q9NXE8 425 aaPredicted RBP16.49■□□□□ 0.23
C9orf78-202ENST00000461349 MYO1BO43795 1136 aa16.48■□□□□ 0.23
C9orf78-202ENST00000461349 ZBED3Q96IU2 234 aaPredicted RBP16.48■□□□□ 0.23
C9orf78-202ENST00000461349 BSDC1Q9NW68 430 aaPredicted RBP16.48■□□□□ 0.23
C9orf78-202ENST00000461349 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
C9orf78-202ENST00000461349 PTCH2Q9Y6C5 1203 aa16.48■□□□□ 0.23
C9orf78-202ENST00000461349 WTIPA6NIX2 430 aaPredicted RBP16.47■□□□□ 0.23
C9orf78-202ENST00000461349 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
C9orf78-202ENST00000461349 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
C9orf78-202ENST00000461349 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
C9orf78-202ENST00000461349 LEMD3Q9Y2U8 911 aa16.47■□□□□ 0.23
C9orf78-202ENST00000461349 TESPA1A2RU30 521 aaPredicted RBP16.46■□□□□ 0.23
C9orf78-202ENST00000461349 MYCP01106 439 aaPredicted RBP16.46■□□□□ 0.23
C9orf78-202ENST00000461349 CTSWP56202 376 aa16.46■□□□□ 0.23
C9orf78-202ENST00000461349 GTF2IP78347 998 aa16.46■□□□□ 0.23
C9orf78-202ENST00000461349 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
C9orf78-202ENST00000461349 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
C9orf78-202ENST00000461349 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
C9orf78-202ENST00000461349 DPF3Q92784 378 aa16.45■□□□□ 0.22
C9orf78-202ENST00000461349 PTPN18Q99952 460 aa16.45■□□□□ 0.22
C9orf78-202ENST00000461349 ZFYVE28Q9HCC9 887 aa16.45■□□□□ 0.22
C9orf78-202ENST00000461349 ZNF804BA4D1E1 1349 aa16.45■□□□□ 0.22
C9orf78-202ENST00000461349 GJA5P36382 358 aa16.44■□□□□ 0.22
C9orf78-202ENST00000461349 CAP1Q01518 475 aa16.44■□□□□ 0.22
C9orf78-202ENST00000461349 TXNRD3Q86VQ6 643 aa16.44■□□□□ 0.22
C9orf78-202ENST00000461349 MTMR14Q8NCE2 650 aa16.44■□□□□ 0.22
C9orf78-202ENST00000461349 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms