RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-212ENST00000461239 LRRC59Q96AG4 307 aaKnown RBP11.16□□□□□ -0.62
ECHDC1-212ENST00000461239 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
ECHDC1-212ENST00000461239 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
ECHDC1-212ENST00000461239 SPATA31A3Q5VYP0 1347 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 SERTM1A2A2V5 107 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 MEN1O00255 615 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 SMPD1P17405 629 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 RELBQ01201 579 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 RGL4Q8IZJ4 473 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 CYP4X1Q8N118 509 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
ECHDC1-212ENST00000461239 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 LRP6O75581 1613 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 NOS2P35228 1153 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 TRIM67Q6ZTA4 783 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 FBXO33Q7Z6M2 555 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 RBCK1Q9BYM8 510 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 STIM2Q9P246 746 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 TRPM3Q9HCF6 1732 aaPredicted RBP11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 SBNO1A3KN83 1393 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
ECHDC1-212ENST00000461239 ITSN1Q15811 1721 aa11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 SSH2Q76I76 1423 aa11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 EIF1AXP47813 144 aaKnown RBP11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 FAM26DQ5JW98 314 aa11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 MEIOBQ8N635 442 aa11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 NGDNQ8NEJ9 315 aaKnown RBP11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 GIPC2Q8TF65 315 aa11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 NLRP3Q96P20 1036 aa11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 KIAA1522Q9P206 1035 aaPredicted RBP11.13□□□□□ -0.63
ECHDC1-212ENST00000461239 CPSF1Q10570 1443 aaKnown RBP11.12□□□□□ -0.63
ECHDC1-212ENST00000461239 ALDH16A1Q8IZ83 802 aa11.12□□□□□ -0.63
ECHDC1-212ENST00000461239 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 TNS3Q68CZ2 1445 aa11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 COL22A1Q8NFW1 1626 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 FZD6O60353 706 aa11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 TMF1P82094 1093 aa11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 ZSCAN10Q96SZ4 725 aaPredicted RBP11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
ECHDC1-212ENST00000461239 SPATA31A6Q5VVP1 1343 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 LCE2BO14633 110 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 PRR20EP86478 221 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 PRR20CP86479 221 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 PRR20DP86480 221 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 PRR20BP86481 221 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 PRR20AP86496 221 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 COL19A1Q14993 1142 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 RGS17Q9UGC6 210 aaPredicted RBP11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 ZNF232Q9UNY5 417 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 HCN4Q9Y3Q4 1203 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
ECHDC1-212ENST00000461239 USP6P35125 1406 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 ZBTB39O15060 712 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 NDUFB5O43674 189 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 RTN1Q16799 776 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 ALKBH2Q6NS38 261 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 ABTB2Q8N961 1025 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 RHBDD1Q8TEB9 315 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 HPS1Q92902 700 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 MRRFQ96E11 262 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 NIFKQ9BYG3 293 aaKnown RBP11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 GRIP2Q9C0E4 1043 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 CCDC87Q9NVE4 849 aa11.09□□□□□ -0.63
ECHDC1-212ENST00000461239 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
ECHDC1-212ENST00000461239 GPC1P35052 558 aa11.08□□□□□ -0.64
ECHDC1-212ENST00000461239 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
ECHDC1-212ENST00000461239 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
ECHDC1-212ENST00000461239 PHACTR1Q9C0D0 580 aa11.08□□□□□ -0.64
ECHDC1-212ENST00000461239 BRPF3Q9ULD4 1205 aa11.08□□□□□ -0.64
ECHDC1-212ENST00000461239 AKAP12Q02952 1782 aa11.08□□□□□ -0.64
ECHDC1-212ENST00000461239 A0A1W2PP64 1363 aa11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 IGHA2P01877 340 aa11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 NUTM2GQ5VZR2 741 aa11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 TMEM214Q6NUQ4 689 aaKnown RBP11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 CITED4Q96RK1 184 aa11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 IGSF5Q9NSI5 407 aa11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 TTC21BQ7Z4L5 1316 aa11.07□□□□□ -0.64
ECHDC1-212ENST00000461239 ARHGEF10O15013 1369 aa11.06□□□□□ -0.64
ECHDC1-212ENST00000461239 MYOM1P52179 1685 aa11.06□□□□□ -0.64
ECHDC1-212ENST00000461239 RNF144AP50876 292 aaPredicted RBP11.06□□□□□ -0.64
ECHDC1-212ENST00000461239 DGKZQ13574 1117 aa11.06□□□□□ -0.64
ECHDC1-212ENST00000461239 ETFBKMTQ8IXQ9 262 aa11.06□□□□□ -0.64
ECHDC1-212ENST00000461239 BRD4O60885 1362 aaPredicted RBP11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 KTN1Q86UP2 1357 aaKnown RBP11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 SPINT1O43278 529 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 TREHO43280 583 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 ADAMTS2O95450 1211 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 C11orf91Q3C1V1 193 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 C1orf53Q5VUE5 145 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 MON2Q7Z3U7 1717 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms