RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
NUP50-212ENST00000461194 PLEKHG2Q9H7P9 1386 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 RGPD2P0DJD1 1756 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 SBF2Q86WG5 1849 aa9.31□□□□□ -0.92
NUP50-212ENST00000461194 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
NUP50-212ENST00000461194 ADD1P35611 737 aaKnown RBP9.31□□□□□ -0.92
NUP50-212ENST00000461194 EML3Q32P44 896 aa9.31□□□□□ -0.92
NUP50-212ENST00000461194 PLEKHM2Q8IWE5 1019 aa9.31□□□□□ -0.92
NUP50-212ENST00000461194 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
NUP50-212ENST00000461194 NHSQ6T4R5 1651 aa9.3□□□□□ -0.92
NUP50-212ENST00000461194 CAPN5O15484 640 aaPredicted RBP9.3□□□□□ -0.92
NUP50-212ENST00000461194 LILRA1O75019 489 aa9.3□□□□□ -0.92
NUP50-212ENST00000461194 TIMP2P16035 220 aa9.3□□□□□ -0.92
NUP50-212ENST00000461194 CBLBQ13191 982 aa9.3□□□□□ -0.92
NUP50-212ENST00000461194 MKRN1Q9UHC7 482 aaKnown RBP9.3□□□□□ -0.92
NUP50-212ENST00000461194 NOD1Q9Y239 953 aa9.3□□□□□ -0.92
NUP50-212ENST00000461194 SRCAPQ6ZRS2 3230 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 PHKG2P15735 406 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 ERVK-9P63128 1117 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 CNGB1Q14028 1251 aaPredicted RBP9.29□□□□□ -0.92
NUP50-212ENST00000461194 AMOTQ4VCS5 1084 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 AEBP1Q8IUX7 1158 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 IFNL2Q8IZJ0 200 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 VRTNQ9H8Y1 702 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 RGPD3A6NKT7 1758 aaPredicted RBP9.29□□□□□ -0.92
NUP50-212ENST00000461194 RGPD4Q7Z3J3 1758 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 RREB1Q92766 1687 aa9.29□□□□□ -0.92
NUP50-212ENST00000461194 KDRP35968 1356 aa9.28□□□□□ -0.92
NUP50-212ENST00000461194 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
NUP50-212ENST00000461194 PLEKHO1Q53GL0 409 aaPredicted RBP9.28□□□□□ -0.92
NUP50-212ENST00000461194 SLC27A3Q5K4L6 730 aa9.28□□□□□ -0.92
NUP50-212ENST00000461194 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
NUP50-212ENST00000461194 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.27□□□□□ -0.93
NUP50-212ENST00000461194 HSP90AB1P08238 724 aaKnown RBP9.27□□□□□ -0.93
NUP50-212ENST00000461194 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.93
NUP50-212ENST00000461194 SLC15A2Q16348 729 aa9.27□□□□□ -0.93
NUP50-212ENST00000461194 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
NUP50-212ENST00000461194 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
NUP50-212ENST00000461194 LRRC4BQ9NT99 713 aa9.27□□□□□ -0.93
NUP50-212ENST00000461194 STK32BQ9NY57 414 aa9.27□□□□□ -0.93
NUP50-212ENST00000461194 NUP188Q5SRE5 1749 aa9.27□□□□□ -0.93
NUP50-212ENST00000461194 PKD1L3Q7Z443 1732 aa9.26□□□□□ -0.93
NUP50-212ENST00000461194 AVPP01185 164 aa9.26□□□□□ -0.93
NUP50-212ENST00000461194 RASA1P20936 1047 aa9.26□□□□□ -0.93
NUP50-212ENST00000461194 PPP2R1AP30153 589 aa9.26□□□□□ -0.93
NUP50-212ENST00000461194 PIGBQ92521 554 aa9.26□□□□□ -0.93
NUP50-212ENST00000461194 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
NUP50-212ENST00000461194 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
NUP50-212ENST00000461194 HMOX1P09601 288 aa9.25□□□□□ -0.93
NUP50-212ENST00000461194 ZNF530Q6P9A1 599 aaPredicted RBP9.25□□□□□ -0.93
NUP50-212ENST00000461194 Q6ZVU0 165 aa9.25□□□□□ -0.93
NUP50-212ENST00000461194 TRIM50Q86XT4 487 aa9.25□□□□□ -0.93
NUP50-212ENST00000461194 SMARCC1Q92922 1105 aaPredicted RBP9.25□□□□□ -0.93
NUP50-212ENST00000461194 DCAF5Q96JK2 942 aa9.25□□□□□ -0.93
NUP50-212ENST00000461194 CFAP53Q96M91 514 aa9.25□□□□□ -0.93
NUP50-212ENST00000461194 CCNL1Q9UK58 526 aaPredicted RBP9.25□□□□□ -0.93
NUP50-212ENST00000461194 BTAF1O14981 1849 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 COL3A1P02461 1466 aaPredicted RBP9.24□□□□□ -0.93
NUP50-212ENST00000461194 ERVV-2B6SEH9 535 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 AXIN1O15169 862 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 HMGB2P26583 209 aaKnown RBP9.24□□□□□ -0.93
NUP50-212ENST00000461194 GTF2IP78347 998 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 ZNF827Q17R98 1081 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 C1orf141Q5JVX7 400 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 OGFOD1Q8N543 542 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 TMOD3Q9NYL9 352 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 DOT1LQ8TEK3 1739 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
NUP50-212ENST00000461194 U2SURPO15042 1029 aaKnown RBP9.23□□□□□ -0.93
NUP50-212ENST00000461194 ST8SIA5O15466 376 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 ADH1AP07327 375 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 KCNQ4P56696 695 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 RELBQ01201 579 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 CYP2U1Q7Z449 544 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 PDGFDQ9GZP0 370 aaPredicted RBP9.23□□□□□ -0.93
NUP50-212ENST00000461194 ZNF395Q9H8N7 513 aaPredicted RBP9.23□□□□□ -0.93
NUP50-212ENST00000461194 SPON1Q9HCB6 807 aa9.23□□□□□ -0.93
NUP50-212ENST00000461194 DNAAF2Q9NVR5 837 aaKnown RBP9.23□□□□□ -0.93
NUP50-212ENST00000461194 KAT6BQ8WYB5 2073 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 ZBTB7BO15156 539 aaPredicted RBP9.22□□□□□ -0.93
NUP50-212ENST00000461194 STAU1O95793 577 aaKnown RBP9.22□□□□□ -0.93
NUP50-212ENST00000461194 ATP1A2P50993 1020 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 CLDN10P78369 228 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 DDX10Q13206 875 aaKnown RBP9.22□□□□□ -0.93
NUP50-212ENST00000461194 MTHFSDQ2M296 383 aaKnown RBP9.22□□□□□ -0.93
NUP50-212ENST00000461194 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 Q6ZNB5 142 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 ZNF594Q96JF6 807 aaPredicted RBP9.22□□□□□ -0.93
NUP50-212ENST00000461194 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 NUDCQ9Y266 331 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 LRP5O75197 1615 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 PAPPAQ13219 1627 aa9.22□□□□□ -0.93
NUP50-212ENST00000461194 KDM6AO15550 1401 aaPredicted RBP9.22□□□□□ -0.93
NUP50-212ENST00000461194 LOC102724428A0A0B4J2F2 783 aa9.21□□□□□ -0.94
NUP50-212ENST00000461194 UPP2O95045 317 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms