RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
HDAC9-219ENST00000461159 FAM177A1Q8N128 213 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-219ENST00000461159 ZNF594Q96JF6 807 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-219ENST00000461159 FAM210AQ96ND0 272 aa10.05□□□□□ -0.8
HDAC9-219ENST00000461159 USP26Q9BXU7 913 aa10.05□□□□□ -0.8
HDAC9-219ENST00000461159 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
HDAC9-219ENST00000461159 RAD50Q92878 1312 aa10.05□□□□□ -0.8
HDAC9-219ENST00000461159 MKL1Q969V6 931 aa10.05□□□□□ -0.8
HDAC9-219ENST00000461159 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
HDAC9-219ENST00000461159 FEZ2Q9UHY8 353 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-219ENST00000461159 TRMT112Q9UI30 125 aaKnown RBP10.05□□□□□ -0.8
HDAC9-219ENST00000461159 APBA3O96018 575 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 NLRP10Q86W26 655 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 EXOC8Q8IYI6 725 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 PROM2Q8N271 834 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 CCDC191Q8NCU4 936 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 ISCA1Q9BUE6 129 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 MED4Q9NPJ6 270 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 CCDC39Q9UFE4 941 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 COL15A1P39059 1388 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 H7C1W4 665 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 PRPF40AO75400 957 aaKnown RBP10.04□□□□□ -0.8
HDAC9-219ENST00000461159 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 REC8O95072 547 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 HCLS1P14317 486 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-219ENST00000461159 TDO2P48775 406 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 ATP2B3Q16720 1220 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 USPL1Q5W0Q7 1092 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 ICE2Q659A1 982 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 LRRCC1Q9C099 1032 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDAC9-219ENST00000461159 ZKSCAN5Q9Y2L8 839 aa10.04□□□□□ -0.8
HDAC9-219ENST00000461159 SBF2Q86WG5 1849 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 GUCY2CP25092 1073 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 MTX1Q13505 466 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 SUSD4Q5VX71 490 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 MBD3O95983 291 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 FOXO4P98177 505 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 LRSAM1Q6UWE0 723 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 TSPAN18Q96SJ8 248 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 FEZ1Q99689 392 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
HDAC9-219ENST00000461159 AK9Q5TCS8 1911 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 MAP4K4O95819 1239 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-219ENST00000461159 RHPN1Q8TCX5 695 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 ARHGEF1Q92888 912 aaKnown RBP10.02□□□□□ -0.81
HDAC9-219ENST00000461159 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
HDAC9-219ENST00000461159 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.81
HDAC9-219ENST00000461159 SALL3Q9BXA9 1300 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 KIF3CO14782 793 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 SASH1O94885 1247 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 PDE1AP54750 535 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 TXNRD1Q16881 649 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 AK7Q96M32 723 aa10.02□□□□□ -0.81
HDAC9-219ENST00000461159 PTPN12Q05209 780 aaKnown RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 ARMCX6Q7L4S7 300 aa10.01□□□□□ -0.81
HDAC9-219ENST00000461159 CREBRFQ8IUR6 639 aa10.01□□□□□ -0.81
HDAC9-219ENST00000461159 PUS3Q9BZE2 481 aaKnown RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 NUP98P52948 1817 aa10.01□□□□□ -0.81
HDAC9-219ENST00000461159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 KLHL33A6NCF5 533 aa10.01□□□□□ -0.81
HDAC9-219ENST00000461159 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 PPP1R12AO14974 1030 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 RFX5P48382 616 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 TBC1D9BQ66K14 1250 aa10.01□□□□□ -0.81
HDAC9-219ENST00000461159 ZBTB38Q8NAP3 1195 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 GPT2Q8TD30 523 aa10.01□□□□□ -0.81
HDAC9-219ENST00000461159 CCDC8Q9H0W5 538 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-219ENST00000461159 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
HDAC9-219ENST00000461159 NHSQ6T4R5 1651 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 CCDC189A1A4V9 331 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 ERVV-1B6SEH8 477 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 KDM4AO75164 1064 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 RPS6KA4O75676 772 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 SDSP20132 328 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 G3BP1Q13283 466 aaKnown RBP eCLIP10□□□□□ -0.81
HDAC9-219ENST00000461159 PKP1Q13835 747 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 LRRC24Q50LG9 513 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 ZNF34Q8IZ26 560 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 SYAP1Q96A49 352 aaPredicted RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 PAIP2Q9BPZ3 127 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 GREM2Q9H772 168 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 RBM27Q9P2N5 1060 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 MPHOSPH10O00566 681 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 ERC2O15083 957 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 DHX16O60231 1041 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 ZPR1O75312 459 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 RFC4P35249 363 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 GTF2F1P35269 517 aaKnown RBP eCLIP10□□□□□ -0.81
HDAC9-219ENST00000461159 MCM2P49736 904 aa10□□□□□ -0.81
HDAC9-219ENST00000461159 ZC3H12AQ5D1E8 599 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 ZGPATQ8N5A5 531 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 TLR7Q9NYK1 1049 aaKnown RBP10□□□□□ -0.81
HDAC9-219ENST00000461159 SYCE3A1L190 88 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 PCCAP05165 728 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-219ENST00000461159 TRIM28Q13263 835 aaKnown RBP9.99□□□□□ -0.81
HDAC9-219ENST00000461159 RABL6Q3YEC7 729 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-219ENST00000461159 MYRIPQ8NFW9 859 aa9.99□□□□□ -0.81
HDAC9-219ENST00000461159 MX1P20591 662 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms