RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 HYPKQ9NX55 129 aa7.23□□□□□ -1.25
HLA-DQA1-205ENST00000460633 PARD3Q8TEW0 1356 aa7.23□□□□□ -1.25
HLA-DQA1-205ENST00000460633 KCTD17Q8N5Z5 321 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 KIF20BQ96Q89 1820 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 CCDC196A0A1B0GTZ2 297 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 PRKAR2BP31323 418 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 PDE4BQ07343 736 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 TAF7Q15545 349 aaPredicted RBP7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 FSD1Q9BTV5 496 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 NAT10Q9H0A0 1025 aaKnown RBP7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 GIGYF2Q6Y7W6 1299 aaKnown RBP7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 LEKR1Q6ZMV7 388 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 DACH1Q9UI36 760 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 SUPT20HL1Q3ZLR7 823 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 HOOK3Q86VS8 718 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 SRCIN1Q9C0H9 1055 aa7.22□□□□□ -1.25
HLA-DQA1-205ENST00000460633 SKIDA1Q1XH10 827 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 CCDC155Q8N6L0 562 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 CRNKL1Q9BZJ0 848 aaKnown RBP7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 KCNG1Q9UIX4 513 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 HOXB7P09629 217 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 RARSP54136 660 aaKnown RBP7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 SLC4A8Q2Y0W8 1093 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 RSPH3Q86UC2 560 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 SMCR8Q8TEV9 937 aaPredicted RBP7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 ACBD3Q9H3P7 528 aa7.21□□□□□ -1.25
HLA-DQA1-205ENST00000460633 FAM208AQ9UK61 1670 aaKnown RBP7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 LTBP4Q8N2S1 1624 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 MCM5P33992 734 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ZSCAN23Q3MJ62 389 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 RBM26Q5T8P6 1007 aaKnown RBP7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 TMEM57Q8N5G2 664 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SDF4Q9BRK5 362 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 TNMDQ9H2S6 317 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ERBB4Q15303 1308 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 PRR36Q9H6K5 1346 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 KIAA0232Q92628 1395 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ARHGEF37A1IGU5 675 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CETN1Q12798 172 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 MAP3K11Q16584 847 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SLC27A3Q5K4L6 730 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 TTLL7Q6ZT98 887 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 GJD4Q96KN9 370 aaPredicted RBP7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 KCNH4Q9UQ05 1017 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CASTP20810 708 aaKnown RBP7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CALRP27797 417 aaKnown RBP7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 KIF5BP33176 963 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 RRS1Q15050 365 aaKnown RBP7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 OLFM4Q6UX06 510 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 EP400NLQ6ZTU2 488 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CPLX3Q8WVH0 158 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 USP25Q9UHP3 1055 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CEP131Q9UPN4 1083 aa7.21□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ERLIN2O94905 339 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 MAP3K19Q56UN5 1328 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SSH2Q76I76 1423 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 EIF4E1BA6NMX2 242 aaKnown RBP7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 EZRP15311 586 aaKnown RBP7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CEBPZQ03701 1054 aaKnown RBP7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 KLHL40Q2TBA0 621 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 TCHPQ9BT92 498 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 DEF6Q9H4E7 631 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ROBO1Q9Y6N7 1651 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 RGS22Q8NE09 1264 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ERMNQ8TAM6 284 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 PNMA3Q9UL41 463 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SEC24BO95487 1268 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ANKRD1Q15327 319 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ARHGEF10LQ9HCE6 1279 aa7.2□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SNX16P57768 344 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 IQCA1Q86XH1 822 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 MSANTD4Q8NCY6 345 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ZNF830Q96NB3 372 aaPredicted RBP7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 FAM50BQ9Y247 325 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 TWISTNBQ3B726 338 aaPredicted RBP7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 DALRD3Q5D0E6 543 aaKnown RBP7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 STK24Q9Y6E0 443 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 TTLL5Q6EMB2 1281 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 MTMR7Q9Y216 660 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 H0YHG0 523 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 KINO60870 393 aaKnown RBP7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 FGFR1OPO95684 399 aaKnown RBP7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CAMK4Q16566 473 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 FILIP1LQ4L180 1135 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 RETREG2Q8NC44 543 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 NUP133Q8WUM0 1156 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 PRPF31Q8WWY3 499 aaKnown RBP7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 PYM1Q9BRP8 204 aaKnown RBP7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 KRT23Q9C075 422 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 POLKQ9UBT6 870 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 NALCNQ8IZF0 1738 aa7.19□□□□□ -1.26
HLA-DQA1-205ENST00000460633 STRCQ7RTU9 1775 aa7.18□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CCP110O43303 1012 aa7.18□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ADCY5O95622 1261 aa7.18□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SNRPA1P09661 255 aaKnown RBP7.18□□□□□ -1.26
HLA-DQA1-205ENST00000460633 MCF2L2Q86YR7 1114 aa7.18□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SMARCE1Q969G3 411 aa7.18□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SPATA31A5Q5VU36 1347 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms