RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 TAF1CQ15572 869 aaPredicted RBP11.86□□□□□ -0.51
EPB41-208ENST00000460378 USP40Q9NVE5 1235 aa11.86□□□□□ -0.51
EPB41-208ENST00000460378 TRAF1Q13077 416 aa11.86□□□□□ -0.51
EPB41-208ENST00000460378 MINDY4BA8MYZ0 360 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 TCP10Q12799 353 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 GCKRQ14397 625 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
EPB41-208ENST00000460378 VPS33BQ9H267 617 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 ARHGEF10LQ9HCE6 1279 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 ANP32BQ92688 251 aaKnown RBP11.85□□□□□ -0.51
EPB41-208ENST00000460378 TAF5LO75529 589 aa11.85□□□□□ -0.51
EPB41-208ENST00000460378 CHD2O14647 1828 aaKnown RBP11.85□□□□□ -0.51
EPB41-208ENST00000460378 NBPF15Q8N660 670 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 PDE4BQ07343 736 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 LBHD1Q9BQE6 289 aaPredicted RBP11.84□□□□□ -0.51
EPB41-208ENST00000460378 PHAXQ9H814 394 aaKnown RBP11.84□□□□□ -0.51
EPB41-208ENST00000460378 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 COG6Q9Y2V7 657 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
EPB41-208ENST00000460378 MMP14P50281 582 aa11.83□□□□□ -0.51
EPB41-208ENST00000460378 ZC3H4Q9UPT8 1303 aaKnown RBP11.83□□□□□ -0.51
EPB41-208ENST00000460378 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
EPB41-208ENST00000460378 CHL1O00533 1208 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 BCAMP50895 628 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 PAGR1Q9BTK6 254 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 DDX11Q96FC9 970 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 IBSPP21815 317 aaPredicted RBP11.83□□□□□ -0.52
EPB41-208ENST00000460378 LPIN2Q92539 896 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 DPF3Q92784 378 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 KIF1BPQ96EK5 621 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 CAMTA1Q9Y6Y1 1673 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 DGKZQ13574 1117 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
EPB41-208ENST00000460378 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
EPB41-208ENST00000460378 RGS3P49796 1198 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 NAPBQ9H115 298 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 CHRNDQ07001 517 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 HLFQ16534 295 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 UBAC1Q9BSL1 405 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 EHMT1Q9H9B1 1298 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 CFAP100Q494V2 611 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 CUL5Q93034 780 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 ZNF341Q9BYN7 854 aa11.82□□□□□ -0.52
EPB41-208ENST00000460378 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 C8orf58Q8NAV2 365 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 SRGNP10124 158 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 ANGEL2Q5VTE6 544 aaKnown RBP11.81□□□□□ -0.52
EPB41-208ENST00000460378 EYA2O00167 538 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 PPLO60437 1756 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 CCDC174Q6PII3 467 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 AGBL3Q8NEM8 1001 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 CTNNA3Q9UI47 895 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
EPB41-208ENST00000460378 BSDC1Q9NW68 430 aaPredicted RBP11.8□□□□□ -0.52
EPB41-208ENST00000460378 R3HCC1Q9Y3T6 440 aaKnown RBP11.8□□□□□ -0.52
EPB41-208ENST00000460378 TRPA1O75762 1119 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 SCARF1Q14162 830 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 DPP9Q86TI2 863 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 CPLX1O14810 134 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 RPAP2Q8IXW5 612 aaPredicted RBP11.8□□□□□ -0.52
EPB41-208ENST00000460378 SCLT1Q96NL6 688 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 BCL9O00512 1426 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 BCAR3O75815 825 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 SASH1O94885 1247 aa11.8□□□□□ -0.52
EPB41-208ENST00000460378 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
EPB41-208ENST00000460378 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
EPB41-208ENST00000460378 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
EPB41-208ENST00000460378 RFX1P22670 979 aa11.79□□□□□ -0.52
EPB41-208ENST00000460378 FASTKD5Q7L8L6 764 aaKnown RBP11.79□□□□□ -0.52
EPB41-208ENST00000460378 COL16A1Q07092 1604 aaPredicted RBP11.79□□□□□ -0.52
EPB41-208ENST00000460378 ZNF76P36508 570 aa11.79□□□□□ -0.52
EPB41-208ENST00000460378 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
EPB41-208ENST00000460378 RSBN1LQ6PCB5 846 aaPredicted RBP11.79□□□□□ -0.52
EPB41-208ENST00000460378 RNF41Q9H4P4 317 aaPredicted RBP11.79□□□□□ -0.52
EPB41-208ENST00000460378 MAGEB6P1A0A0J9YX57 407 aa11.78□□□□□ -0.52
EPB41-208ENST00000460378 ZBED4O75132 1171 aa11.78□□□□□ -0.52
EPB41-208ENST00000460378 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
EPB41-208ENST00000460378 PSMD14O00487 310 aa11.78□□□□□ -0.52
EPB41-208ENST00000460378 TRIM29Q14134 588 aa11.78□□□□□ -0.52
EPB41-208ENST00000460378 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
EPB41-208ENST00000460378 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
EPB41-208ENST00000460378 TNPO2O14787 897 aaKnown RBP11.77□□□□□ -0.52
EPB41-208ENST00000460378 USP14P54578 494 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms