RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 RBM10P98175 930 aaKnown RBP18.87■□□□□ 0.61
CMTM3-203ENST00000460097 DDX46Q7L014 1031 aaKnown RBP18.87■□□□□ 0.61
CMTM3-203ENST00000460097 CRAMP1Q96RY5 1269 aa18.87■□□□□ 0.61
CMTM3-203ENST00000460097 TSPY26PQ9H489 355 aa18.87■□□□□ 0.61
CMTM3-203ENST00000460097 UTYO14607 1347 aa18.87■□□□□ 0.61
CMTM3-203ENST00000460097 CCDC152Q4G0S7 254 aa18.86■□□□□ 0.61
CMTM3-203ENST00000460097 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
CMTM3-203ENST00000460097 CCDC94Q9BW85 323 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-203ENST00000460097 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
CMTM3-203ENST00000460097 SYCE3A1L190 88 aa18.86■□□□□ 0.61
CMTM3-203ENST00000460097 CTSWP56202 376 aa18.86■□□□□ 0.61
CMTM3-203ENST00000460097 PRPF40BQ6NWY9 871 aaKnown RBP18.86■□□□□ 0.61
CMTM3-203ENST00000460097 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
CMTM3-203ENST00000460097 DDX60Q8IY21 1712 aaKnown RBP18.85■□□□□ 0.61
CMTM3-203ENST00000460097 GRIN3BO60391 1043 aa18.85■□□□□ 0.61
CMTM3-203ENST00000460097 TMEM87AQ8NBN3 555 aa18.85■□□□□ 0.61
CMTM3-203ENST00000460097 TTLL11Q8NHH1 800 aa18.85■□□□□ 0.61
CMTM3-203ENST00000460097 RBM27Q9P2N5 1060 aaKnown RBP18.85■□□□□ 0.61
CMTM3-203ENST00000460097 DLEC1Q9Y238 1755 aa18.85■□□□□ 0.61
CMTM3-203ENST00000460097 CCDC85AQ96PX6 553 aaPredicted RBP18.84■□□□□ 0.61
CMTM3-203ENST00000460097 BRCA1P38398 1863 aaKnown RBP18.84■□□□□ 0.61
CMTM3-203ENST00000460097 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.61
CMTM3-203ENST00000460097 CSF1RP07333 972 aa18.83■□□□□ 0.61
CMTM3-203ENST00000460097 FOXO4P98177 505 aa18.83■□□□□ 0.61
CMTM3-203ENST00000460097 PIBF1Q8WXW3 757 aa18.83■□□□□ 0.61
CMTM3-203ENST00000460097 SUCLG2Q96I99 432 aa18.83■□□□□ 0.61
CMTM3-203ENST00000460097 C21orf2O43822 256 aa18.83■□□□□ 0.6
CMTM3-203ENST00000460097 BBOX1O75936 387 aa18.83■□□□□ 0.6
CMTM3-203ENST00000460097 GRAPQ13588 217 aa18.83■□□□□ 0.6
CMTM3-203ENST00000460097 GRAPLQ8TC17 118 aaPredicted RBP18.83■□□□□ 0.6
CMTM3-203ENST00000460097 TMX3Q96JJ7 454 aa18.83■□□□□ 0.6
CMTM3-203ENST00000460097 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
CMTM3-203ENST00000460097 HDAC5Q9UQL6 1122 aa18.83■□□□□ 0.6
CMTM3-203ENST00000460097 HMMRO75330 724 aa18.82■□□□□ 0.6
CMTM3-203ENST00000460097 UBTFL1P0CB47 393 aaPredicted RBP18.82■□□□□ 0.6
CMTM3-203ENST00000460097 LAMB2P55268 1798 aa18.82■□□□□ 0.6
CMTM3-203ENST00000460097 MCCP23508 829 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 EPHA10Q5JZY3 1008 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 LMBR1LQ6UX01 489 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 C7orf43Q8WVR3 580 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 KAZALD1Q96I82 304 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 GREM2Q9H772 168 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 SEC31BQ9NQW1 1179 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 SPTLC3Q9NUV7 552 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 PPEF1O14829 653 aaPredicted RBP18.81■□□□□ 0.6
CMTM3-203ENST00000460097 GNAI3P08754 354 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 CELF1Q92879 486 aaKnown RBP18.81■□□□□ 0.6
CMTM3-203ENST00000460097 MEIS3Q99687 375 aa18.81■□□□□ 0.6
CMTM3-203ENST00000460097 SLX4Q8IY92 1834 aa18.8■□□□□ 0.6
CMTM3-203ENST00000460097 AK9Q5TCS8 1911 aa18.8■□□□□ 0.6
CMTM3-203ENST00000460097 RPS8P62241 208 aaKnown RBP18.8■□□□□ 0.6
CMTM3-203ENST00000460097 SOGA3Q5TF21 947 aa18.8■□□□□ 0.6
CMTM3-203ENST00000460097 ARHGAP27Q6ZUM4 889 aa18.8■□□□□ 0.6
CMTM3-203ENST00000460097 TMX4Q9H1E5 349 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-203ENST00000460097 CHMP3Q9Y3E7 222 aa18.8■□□□□ 0.6
CMTM3-203ENST00000460097 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-203ENST00000460097 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
CMTM3-203ENST00000460097 BICC1Q9H694 974 aaKnown RBP18.79■□□□□ 0.6
CMTM3-203ENST00000460097 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.79■□□□□ 0.6
CMTM3-203ENST00000460097 RTL9Q8NET4 1388 aa18.79■□□□□ 0.6
CMTM3-203ENST00000460097 ITGA6P23229 1130 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 TMC4Q7Z404 712 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 ANKRD18AQ8IVF6 992 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
CMTM3-203ENST00000460097 MYH3P11055 1940 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 TPM3P06753 285 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 IFIT5Q13325 482 aaKnown RBP18.78■□□□□ 0.6
CMTM3-203ENST00000460097 CC2D2BQ6DHV5 1058 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 SP8Q8IXZ3 490 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 ATP6V0A2Q9Y487 856 aa18.78■□□□□ 0.6
CMTM3-203ENST00000460097 ARFGEF1Q9Y6D6 1849 aa18.77■□□□□ 0.6
CMTM3-203ENST00000460097 WDR33Q9C0J8 1336 aaKnown RBP18.77■□□□□ 0.6
CMTM3-203ENST00000460097 ANKRD18BA2A2Z9 1011 aa18.77■□□□□ 0.6
CMTM3-203ENST00000460097 PTMAP06454 111 aaKnown RBP18.77■□□□□ 0.6
CMTM3-203ENST00000460097 DMTNQ08495 405 aa18.77■□□□□ 0.6
CMTM3-203ENST00000460097 CCDC57Q2TAC2 916 aa18.77■□□□□ 0.6
CMTM3-203ENST00000460097 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-203ENST00000460097 CCDC93Q567U6 631 aa18.77■□□□□ 0.6
CMTM3-203ENST00000460097 CACNA1SQ13698 1873 aa18.77■□□□□ 0.59
CMTM3-203ENST00000460097 SALL3Q9BXA9 1300 aa18.77■□□□□ 0.59
CMTM3-203ENST00000460097 PDE1AP54750 535 aa18.76■□□□□ 0.59
CMTM3-203ENST00000460097 OLFM4Q6UX06 510 aa18.76■□□□□ 0.59
CMTM3-203ENST00000460097 RTKN2Q8IZC4 609 aa18.76■□□□□ 0.59
CMTM3-203ENST00000460097 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
CMTM3-203ENST00000460097 IGHMBP2P38935 993 aaKnown RBP18.76■□□□□ 0.59
CMTM3-203ENST00000460097 NEK4P51957 841 aa18.76■□□□□ 0.59
CMTM3-203ENST00000460097 OTUD7AQ8TE49 926 aaPredicted RBP18.76■□□□□ 0.59
CMTM3-203ENST00000460097 ESYT1Q9BSJ8 1104 aa18.76■□□□□ 0.59
CMTM3-203ENST00000460097 GTPBP4Q9BZE4 634 aaKnown RBP18.76■□□□□ 0.59
CMTM3-203ENST00000460097 AOX1Q06278 1338 aa18.75■□□□□ 0.59
CMTM3-203ENST00000460097 TAF1P21675 1872 aa18.75■□□□□ 0.59
CMTM3-203ENST00000460097 GNAI2P04899 355 aa18.75■□□□□ 0.59
CMTM3-203ENST00000460097 GRIPAP1Q4V328 841 aa18.75■□□□□ 0.59
CMTM3-203ENST00000460097 CCDC183Q5T5S1 534 aa18.75■□□□□ 0.59
CMTM3-203ENST00000460097 NOLC1Q14978 699 aaKnown RBP eCLIP18.74■□□□□ 0.59
CMTM3-203ENST00000460097 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
CMTM3-203ENST00000460097 TAF7LQ5H9L4 462 aa18.73■□□□□ 0.59
CMTM3-203ENST00000460097 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
CMTM3-203ENST00000460097 NFKBIEO00221 500 aa18.72■□□□□ 0.59
CMTM3-203ENST00000460097 SLC51AQ86UW1 340 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms