RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SEC31BQ9NQW1 1179 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 XDHP47989 1333 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 PITPNM2Q9BZ72 1349 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 SPDYE2BA6NHP3 402 aa10.22□□□□□ -0.77
HPS4-207ENST00000459918 GPR25O00155 361 aa10.22□□□□□ -0.77
HPS4-207ENST00000459918 SPDYE6P0CI01 402 aa10.22□□□□□ -0.77
HPS4-207ENST00000459918 FXR2P51116 673 aaKnown RBP eCLIP10.22□□□□□ -0.77
HPS4-207ENST00000459918 ZNF280AP59817 542 aaPredicted RBP10.22□□□□□ -0.77
HPS4-207ENST00000459918 WDR43Q15061 677 aaKnown RBP eCLIP10.22□□□□□ -0.77
HPS4-207ENST00000459918 SPDYE2Q495Y8 402 aa10.22□□□□□ -0.77
HPS4-207ENST00000459918 FBXO46Q6PJ61 603 aaPredicted RBP10.22□□□□□ -0.77
HPS4-207ENST00000459918 ZBTB38Q8NAP3 1195 aaPredicted RBP10.22□□□□□ -0.77
HPS4-207ENST00000459918 MYD88Q99836 296 aa10.22□□□□□ -0.77
HPS4-207ENST00000459918 PODXL2Q9NZ53 605 aa10.22□□□□□ -0.77
HPS4-207ENST00000459918 FKTNO75072 461 aa10.21□□□□□ -0.77
HPS4-207ENST00000459918 SASH1O94885 1247 aa10.21□□□□□ -0.77
HPS4-207ENST00000459918 HOXB7P09629 217 aa10.21□□□□□ -0.77
HPS4-207ENST00000459918 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
HPS4-207ENST00000459918 ARMC9Q7Z3E5 817 aa10.21□□□□□ -0.77
HPS4-207ENST00000459918 PODNQ7Z5L7 613 aa10.21□□□□□ -0.77
HPS4-207ENST00000459918 CHL1O00533 1208 aa10.2□□□□□ -0.78
HPS4-207ENST00000459918 ZNF609O15014 1411 aa10.2□□□□□ -0.78
HPS4-207ENST00000459918 PDE8AO60658 829 aa10.2□□□□□ -0.78
HPS4-207ENST00000459918 NBPF9Q3BBW0 867 aa10.2□□□□□ -0.78
HPS4-207ENST00000459918 DUSP27Q5VZP5 1158 aa10.2□□□□□ -0.78
HPS4-207ENST00000459918 SP7Q8TDD2 431 aaPredicted RBP10.2□□□□□ -0.78
HPS4-207ENST00000459918 MYO3BQ8WXR4 1341 aa10.2□□□□□ -0.78
HPS4-207ENST00000459918 JARID2Q92833 1246 aaPredicted RBP10.2□□□□□ -0.78
HPS4-207ENST00000459918 CDC5LQ99459 802 aaKnown RBP10.2□□□□□ -0.78
HPS4-207ENST00000459918 CWC25Q9NXE8 425 aaPredicted RBP10.2□□□□□ -0.78
HPS4-207ENST00000459918 TRIM17Q9Y577 477 aa10.2□□□□□ -0.78
HPS4-207ENST00000459918 MED23Q9ULK4 1368 aa10.19□□□□□ -0.78
HPS4-207ENST00000459918 DDX58O95786 925 aaKnown RBP10.19□□□□□ -0.78
HPS4-207ENST00000459918 ALDH1A1P00352 501 aa10.19□□□□□ -0.78
HPS4-207ENST00000459918 APOBEC3FQ8IUX4 373 aaKnown RBP10.19□□□□□ -0.78
HPS4-207ENST00000459918 MXD3Q9BW11 206 aa10.19□□□□□ -0.78
HPS4-207ENST00000459918 ANGEL1Q9UNK9 670 aaKnown RBP10.19□□□□□ -0.78
HPS4-207ENST00000459918 ECM29Q5VYK3 1845 aa10.19□□□□□ -0.78
HPS4-207ENST00000459918 ELL2O00472 640 aaPredicted RBP10.18□□□□□ -0.78
HPS4-207ENST00000459918 KCNJ4P48050 445 aa10.18□□□□□ -0.78
HPS4-207ENST00000459918 TM4SF4P48230 202 aa10.18□□□□□ -0.78
HPS4-207ENST00000459918 CCDC191Q8NCU4 936 aa10.18□□□□□ -0.78
HPS4-207ENST00000459918 RUNDC1Q96C34 613 aa10.18□□□□□ -0.78
HPS4-207ENST00000459918 ZNF646O15015 1829 aaPredicted RBP10.17□□□□□ -0.78
HPS4-207ENST00000459918 RBBP6Q7Z6E9 1792 aaKnown RBP10.17□□□□□ -0.78
HPS4-207ENST00000459918 WNT10BO00744 389 aa10.17□□□□□ -0.78
HPS4-207ENST00000459918 PCCAP05165 728 aaPredicted RBP10.17□□□□□ -0.78
HPS4-207ENST00000459918 PTPN12Q05209 780 aaKnown RBP10.17□□□□□ -0.78
HPS4-207ENST00000459918 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
HPS4-207ENST00000459918 KIAA0825Q8IV33 1275 aa10.17□□□□□ -0.78
HPS4-207ENST00000459918 GMLQ99445 158 aa10.17□□□□□ -0.78
HPS4-207ENST00000459918 PHAXQ9H814 394 aaKnown RBP10.17□□□□□ -0.78
HPS4-207ENST00000459918 CENPFP49454 3210 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 MANSC4A6NHS7 340 aaPredicted RBP10.16□□□□□ -0.78
HPS4-207ENST00000459918 MYO1BO43795 1136 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 IGHMBP2P38935 993 aaKnown RBP10.16□□□□□ -0.78
HPS4-207ENST00000459918 CCT4P50991 539 aaKnown RBP10.16□□□□□ -0.78
HPS4-207ENST00000459918 CTSWP56202 376 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 RALBP1Q15311 655 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 NOM1Q5C9Z4 860 aaKnown RBP10.16□□□□□ -0.78
HPS4-207ENST00000459918 DACT2Q5SW24 774 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 STRIP1Q5VSL9 837 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 INTS3Q68E01 1043 aaKnown RBP10.16□□□□□ -0.78
HPS4-207ENST00000459918 OTUD7BQ6GQQ9 843 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 SLC10A4Q96EP9 437 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 COA1Q9GZY4 146 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 MBIPQ9NS73 344 aa10.16□□□□□ -0.78
HPS4-207ENST00000459918 PPP1R12BO60237 982 aaPredicted RBP10.15□□□□□ -0.78
HPS4-207ENST00000459918 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.78
HPS4-207ENST00000459918 DLGAP5Q15398 846 aa10.15□□□□□ -0.78
HPS4-207ENST00000459918 HABP4Q5JVS0 413 aaKnown RBP10.15□□□□□ -0.78
HPS4-207ENST00000459918 SPRYD7Q5W111 196 aa10.15□□□□□ -0.78
HPS4-207ENST00000459918 TTLL5Q6EMB2 1281 aa10.15□□□□□ -0.78
HPS4-207ENST00000459918 ERO1AQ96HE7 468 aa10.15□□□□□ -0.78
HPS4-207ENST00000459918 FZD1Q9UP38 647 aa10.15□□□□□ -0.78
HPS4-207ENST00000459918 TRIM35Q9UPQ4 493 aa10.15□□□□□ -0.78
HPS4-207ENST00000459918 MAP3K2Q9Y2U5 619 aa10.15□□□□□ -0.78
HPS4-207ENST00000459918 COL1A1P02452 1464 aaPredicted RBP10.15□□□□□ -0.78
HPS4-207ENST00000459918 POTEFA5A3E0 1075 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 F8W031 263 aaPredicted RBP10.14□□□□□ -0.79
HPS4-207ENST00000459918 RBM5P52756 815 aaKnown RBP eCLIP10.14□□□□□ -0.79
HPS4-207ENST00000459918 INHBEP58166 350 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 GTF2IP78347 998 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 OTOP1Q7RTM1 612 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 IFNL1Q8IU54 200 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 MPHOSPH8Q99549 860 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 METTL22Q9BUU2 404 aaPredicted RBP10.14□□□□□ -0.79
HPS4-207ENST00000459918 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 CHMP4AQ9BY43 222 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 R3HDMLQ9H3Y0 253 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 GREM2Q9H772 168 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 VEZTQ9HBM0 779 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 BSDC1Q9NW68 430 aaPredicted RBP10.14□□□□□ -0.79
HPS4-207ENST00000459918 MINPP1Q9UNW1 487 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 LAMB1P07942 1786 aa10.14□□□□□ -0.79
HPS4-207ENST00000459918 ZNF804BA4D1E1 1349 aa10.13□□□□□ -0.79
HPS4-207ENST00000459918 MYBBP1AQ9BQG0 1328 aaKnown RBP10.13□□□□□ -0.79
HPS4-207ENST00000459918 HTTP42858 3142 aa10.13□□□□□ -0.79
HPS4-207ENST00000459918 WTIPA6NIX2 430 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms