RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 CIAPIN1Q6FI81 312 aa27.13■■□□□ 1.93
SSNA1-202ENST00000459860 PLIN1O60240 522 aa27.12■■□□□ 1.93
SSNA1-202ENST00000459860 SCNN1DP51172 638 aa27.12■■□□□ 1.93
SSNA1-202ENST00000459860 HELBQ8NG08 1087 aaPredicted RBP27.12■■□□□ 1.93
SSNA1-202ENST00000459860 PANK1Q8TE04 598 aa27.12■■□□□ 1.93
SSNA1-202ENST00000459860 TAF5LO75529 589 aa27.11■■□□□ 1.93
SSNA1-202ENST00000459860 RAD17O75943 681 aa27.11■■□□□ 1.93
SSNA1-202ENST00000459860 CXCL9Q07325 125 aa27.11■■□□□ 1.93
SSNA1-202ENST00000459860 PUS3Q9BZE2 481 aaKnown RBP27.11■■□□□ 1.93
SSNA1-202ENST00000459860 PSME4Q14997 1843 aa27.11■■□□□ 1.93
SSNA1-202ENST00000459860 CAPN15O75808 1086 aa27.1■■□□□ 1.93
SSNA1-202ENST00000459860 LMOD1P29536 600 aaPredicted RBP27.1■■□□□ 1.93
SSNA1-202ENST00000459860 METTL24Q5JXM2 366 aa27.1■■□□□ 1.93
SSNA1-202ENST00000459860 KLHDC4Q8TBB5 520 aa27.1■■□□□ 1.93
SSNA1-202ENST00000459860 YDJCA8MPS7 323 aa27.09■■□□□ 1.93
SSNA1-202ENST00000459860 FOXN1O15353 648 aa27.09■■□□□ 1.93
SSNA1-202ENST00000459860 SRGAP3O43295 1099 aa27.09■■□□□ 1.93
SSNA1-202ENST00000459860 EPS15P42566 896 aa27.09■■□□□ 1.93
SSNA1-202ENST00000459860 RFX5P48382 616 aaPredicted RBP27.09■■□□□ 1.93
SSNA1-202ENST00000459860 RIPOR2Q9Y4F9 1068 aa27.09■■□□□ 1.93
SSNA1-202ENST00000459860 PTPN12Q05209 780 aaKnown RBP27.08■■□□□ 1.93
SSNA1-202ENST00000459860 MTX1Q13505 466 aa27.08■■□□□ 1.93
SSNA1-202ENST00000459860 LRRC24Q50LG9 513 aa27.08■■□□□ 1.93
SSNA1-202ENST00000459860 FBXO3Q9UK99 471 aa27.08■■□□□ 1.93
SSNA1-202ENST00000459860 RASSF10A6NK89 507 aa27.07■■□□□ 1.92
SSNA1-202ENST00000459860 EYA2O00167 538 aa27.07■■□□□ 1.92
SSNA1-202ENST00000459860 PODNQ7Z5L7 613 aa27.07■■□□□ 1.92
SSNA1-202ENST00000459860 COA1Q9GZY4 146 aa27.07■■□□□ 1.92
SSNA1-202ENST00000459860 SCN9AQ15858 1988 aa27.07■■□□□ 1.92
SSNA1-202ENST00000459860 WTIPA6NIX2 430 aaPredicted RBP27.06■■□□□ 1.92
SSNA1-202ENST00000459860 ZBTB7BO15156 539 aaPredicted RBP27.06■■□□□ 1.92
SSNA1-202ENST00000459860 UBE4AQ14139 1066 aa27.06■■□□□ 1.92
SSNA1-202ENST00000459860 MVPQ14764 893 aaKnown RBP27.06■■□□□ 1.92
SSNA1-202ENST00000459860 CHMP4BQ9H444 224 aaKnown RBP27.06■■□□□ 1.92
SSNA1-202ENST00000459860 DDX19BQ9UMR2 479 aa27.06■■□□□ 1.92
SSNA1-202ENST00000459860 SIL1Q9H173 461 aa27.05■■□□□ 1.92
SSNA1-202ENST00000459860 CIAO1O76071 339 aa27.04■■□□□ 1.92
SSNA1-202ENST00000459860 PDE3AQ14432 1141 aa27.04■■□□□ 1.92
SSNA1-202ENST00000459860 C15orf52Q6ZUT6 534 aaKnown RBP27.04■■□□□ 1.92
SSNA1-202ENST00000459860 ZNF804AQ7Z570 1209 aa27.04■■□□□ 1.92
SSNA1-202ENST00000459860 COPRSQ9NQ92 184 aa27.04■■□□□ 1.92
SSNA1-202ENST00000459860 COG6Q9Y2V7 657 aa27.04■■□□□ 1.92
SSNA1-202ENST00000459860 SNAP23O00161 211 aa27.03■■□□□ 1.92
SSNA1-202ENST00000459860 PSMD14O00487 310 aa27.03■■□□□ 1.92
SSNA1-202ENST00000459860 PDE8BO95263 885 aa27.03■■□□□ 1.92
SSNA1-202ENST00000459860 KLRK1P26718 216 aa27.03■■□□□ 1.92
SSNA1-202ENST00000459860 GMPSP49915 693 aaPredicted RBP27.03■■□□□ 1.92
SSNA1-202ENST00000459860 FMR1Q06787 632 aaKnown RBP eCLIP27.03■■□□□ 1.92
SSNA1-202ENST00000459860 DEFB115Q30KQ5 88 aa27.03■■□□□ 1.92
SSNA1-202ENST00000459860 TXNRD3Q86VQ6 643 aa27.03■■□□□ 1.92
SSNA1-202ENST00000459860 WBP1LQ9NX94 342 aa27.03■■□□□ 1.92
SSNA1-202ENST00000459860 USP50Q70EL3 339 aaPredicted RBP27.02■■□□□ 1.92
SSNA1-202ENST00000459860 C1orf115Q9H7X2 142 aa27.02■■□□□ 1.92
SSNA1-202ENST00000459860 RPS12P25398 132 aaKnown RBP27.01■■□□□ 1.91
SSNA1-202ENST00000459860 IL15P40933 162 aaPredicted RBP27.01■■□□□ 1.91
SSNA1-202ENST00000459860 FBXW7Q969H0 707 aa27.01■■□□□ 1.91
SSNA1-202ENST00000459860 PRDM10Q9NQV6 1147 aa27.01■■□□□ 1.91
SSNA1-202ENST00000459860 PA2G4Q9UQ80 394 aaKnown RBP27.01■■□□□ 1.91
SSNA1-202ENST00000459860 USP17L3A6NCW0 530 aa27■■□□□ 1.91
SSNA1-202ENST00000459860 USP17L4A6NCW7 530 aa27■■□□□ 1.91
SSNA1-202ENST00000459860 PUM3Q15397 648 aaKnown RBP27■■□□□ 1.91
SSNA1-202ENST00000459860 USP17L1Q7RTZ2 530 aa27■■□□□ 1.91
SSNA1-202ENST00000459860 KCNQ5Q9NR82 932 aa27■■□□□ 1.91
SSNA1-202ENST00000459860 GPRC5DQ9NZD1 345 aa27■■□□□ 1.91
SSNA1-202ENST00000459860 IRS2Q9Y4H2 1338 aa26.99■■□□□ 1.91
SSNA1-202ENST00000459860 ATG9AQ7Z3C6 839 aa26.99■■□□□ 1.91
SSNA1-202ENST00000459860 VGLL2Q8N8G2 317 aa26.99■■□□□ 1.91
SSNA1-202ENST00000459860 CEP126Q9P2H0 1117 aa26.99■■□□□ 1.91
SSNA1-202ENST00000459860 WDR33Q9C0J8 1336 aaKnown RBP26.98■■□□□ 1.91
SSNA1-202ENST00000459860 PNMA6EA0A0J9YXQ4 647 aa26.98■■□□□ 1.91
SSNA1-202ENST00000459860 VIL1P09327 827 aaKnown RBP26.98■■□□□ 1.91
SSNA1-202ENST00000459860 IFIT1P09914 478 aaKnown RBP26.98■■□□□ 1.91
SSNA1-202ENST00000459860 CTCFP49711 727 aaPredicted RBP26.98■■□□□ 1.91
SSNA1-202ENST00000459860 DPF2Q92785 391 aa26.98■■□□□ 1.91
SSNA1-202ENST00000459860 CD209Q9NNX6 404 aa26.98■■□□□ 1.91
SSNA1-202ENST00000459860 ZBTB12Q9Y330 459 aaPredicted RBP26.98■■□□□ 1.91
SSNA1-202ENST00000459860 ATP8B2P98198 1209 aa26.97■■□□□ 1.91
SSNA1-202ENST00000459860 CAVIN4Q5BKX8 364 aa26.97■■□□□ 1.91
SSNA1-202ENST00000459860 CST9Q5W186 159 aa26.97■■□□□ 1.91
SSNA1-202ENST00000459860 RSBN1LQ6PCB5 846 aaPredicted RBP26.97■■□□□ 1.91
SSNA1-202ENST00000459860 VPS37DQ86XT2 251 aa26.97■■□□□ 1.91
SSNA1-202ENST00000459860 ADARB2Q9NS39 739 aaKnown RBP26.97■■□□□ 1.91
SSNA1-202ENST00000459860 ABT1Q9ULW3 272 aaKnown RBP26.97■■□□□ 1.91
SSNA1-202ENST00000459860 ZNF646O15015 1829 aaPredicted RBP26.97■■□□□ 1.91
SSNA1-202ENST00000459860 H7C1D1 291 aa26.96■■□□□ 1.91
SSNA1-202ENST00000459860 TRAF5O00463 557 aa26.96■■□□□ 1.91
SSNA1-202ENST00000459860 SLC5A1P13866 664 aa26.96■■□□□ 1.91
SSNA1-202ENST00000459860 RRP1P56182 461 aaKnown RBP26.96■■□□□ 1.91
SSNA1-202ENST00000459860 C20orf194Q5TEA3 1177 aa26.96■■□□□ 1.91
SSNA1-202ENST00000459860 STRIP1Q5VSL9 837 aa26.96■■□□□ 1.91
SSNA1-202ENST00000459860 AIDAQ96BJ3 306 aa26.96■■□□□ 1.91
SSNA1-202ENST00000459860 CNOT7Q9UIV1 285 aaKnown RBP26.96■■□□□ 1.91
SSNA1-202ENST00000459860 ZNF609O15014 1411 aa26.96■■□□□ 1.91
SSNA1-202ENST00000459860 MYO3BQ8WXR4 1341 aa26.95■■□□□ 1.91
SSNA1-202ENST00000459860 HIBADHP31937 336 aaKnown RBP26.95■■□□□ 1.9
SSNA1-202ENST00000459860 G3BP1Q13283 466 aaKnown RBP eCLIP26.95■■□□□ 1.9
SSNA1-202ENST00000459860 MICALL2Q8IY33 904 aa26.95■■□□□ 1.9
SSNA1-202ENST00000459860 AGBL3Q8NEM8 1001 aa26.95■■□□□ 1.9
SSNA1-202ENST00000459860 LPIN2Q92539 896 aa26.95■■□□□ 1.9
SSNA1-202ENST00000459860 MYH13Q9UKX3 1938 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms