RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 ARHGEF5Q12774 1597 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 FAM181BA6NEQ2 426 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 MAPK8P45983 427 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 SEC13P55735 322 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 GAS6Q14393 721 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 DBN1Q16643 649 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 ESCO1Q5FWF5 840 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 CKAP2LQ8IYA6 745 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 TRIM22Q8IYM9 498 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 SIX5Q8N196 739 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 GMCL1Q96IK5 515 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 RPS6KC1Q96S38 1066 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 CROCC2H7BZ55 1655 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 CCDC141Q6ZP82 1450 aa6.28□□□□□ -1.4
SPARCL1-204ENST00000458304 FAM13AO94988 1023 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 THBS1P07996 1170 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 SLURP2P0DP57 97 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 ATP2B2Q01814 1243 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 PLEKHG4Q58EX7 1191 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 NBPF6Q5VWK0 638 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 PNISRQ8TF01 805 aaKnown RBP6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 NBPF4Q96M43 638 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 FRMD6Q96NE9 622 aa6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 ZSCAN10Q96SZ4 725 aaPredicted RBP6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 SLKQ9H2G2 1235 aaPredicted RBP6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 RBM19Q9Y4C8 960 aaKnown RBP6.27□□□□□ -1.41
SPARCL1-204ENST00000458304 PLCH2O75038 1416 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 KIAA1107Q9UPP5 1409 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 INHAP05111 366 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 PLCB3Q01970 1234 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 DSC3Q14574 896 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 ODR4Q5SWX8 454 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 ZNF385CQ66K41 422 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 PRPF38AQ8NAV1 312 aaKnown RBP6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 HELQQ8TDG4 1101 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 TMC1Q8TDI8 760 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 MKL1Q969V6 931 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 NAP1L5Q96NT1 182 aaPredicted RBP6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 CITED4Q96RK1 184 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 MKNK1Q9BUB5 465 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 TIMMDC1Q9NPL8 285 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 RNF19AQ9NV58 838 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 PNMA2Q9UL42 364 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 NOD1Q9Y239 953 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 ABCC10Q5T3U5 1492 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 ERCC6L2Q5T890 1561 aa6.26□□□□□ -1.41
SPARCL1-204ENST00000458304 C9orf84Q5VXU9 1444 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 ASXL2Q76L83 1435 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 TMEM229AB2RXF0 380 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 PTCD1O75127 700 aaKnown RBP6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 DKK1O94907 266 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 GDF10P55107 478 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 AMPD3Q01432 767 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 EHHADHQ08426 723 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 SERINC3Q13530 473 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 C4orf17Q53FE4 359 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 ZNF394Q53GI3 561 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 RIPOR1Q6ZS17 1223 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 C8orf48Q96LL4 319 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 RNPC3Q96LT9 517 aaKnown RBP6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 DMRTB1Q96MA1 342 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 GAS2L1Q99501 681 aaPredicted RBP6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 RRP7BPQ9NSQ0 103 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 BSDC1Q9NW68 430 aaPredicted RBP6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 PCDHGB7Q9Y5F8 929 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 PCDHGA11Q9Y5H2 935 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 TONSLQ96HA7 1378 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 ADGRL2O95490 1459 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 CDC42BPBQ9Y5S2 1711 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 ABCA9Q8IUA7 1624 aa6.25□□□□□ -1.41
SPARCL1-204ENST00000458304 KANK1Q14678 1352 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 DHX57Q6P158 1386 aaKnown RBP6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 H7C1W4 665 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 GPR25O00155 361 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 F11P03951 625 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 NPR3P17342 541 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 PHKA2P46019 1235 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 RACK1P63244 317 aaKnown RBP6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 TLR1Q15399 786 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 CLEC4GQ6UXB4 293 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 ZNF295-AS1Q8N0V1 137 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 WHAMMQ8TF30 809 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 GNL3LQ9NVN8 582 aaKnown RBP6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 ABCC5O15440 1437 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 NAIPQ13075 1403 aa6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 SPAG9O60271 1321 aaKnown RBP6.24□□□□□ -1.41
SPARCL1-204ENST00000458304 TTC37Q6PGP7 1564 aa6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 FANCAO15360 1455 aa6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 TEX14Q8IWB6 1497 aa6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 SRSF11Q05519 484 aaKnown RBP6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 FOXD4Q12950 439 aaPredicted RBP6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 UBAP2LQ14157 1087 aaKnown RBP6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 GNASQ5JWF2 1037 aa6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 CCSAPQ6IQ19 270 aaPredicted RBP6.23□□□□□ -1.41
SPARCL1-204ENST00000458304 C11orf96Q7Z7L8 435 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms