RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 C21orf2O43822 256 aa10.9□□□□□ -0.66
LINC01888-202ENST00000457602 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
LINC01888-202ENST00000457602 SNRPA1P09661 255 aaKnown RBP10.9□□□□□ -0.66
LINC01888-202ENST00000457602 ST5P78524 1137 aa10.9□□□□□ -0.66
LINC01888-202ENST00000457602 ZNF697Q5TEC3 545 aa10.9□□□□□ -0.66
LINC01888-202ENST00000457602 KDM4CQ9H3R0 1056 aa10.9□□□□□ -0.66
LINC01888-202ENST00000457602 PCDHB15Q9Y5E8 787 aa10.9□□□□□ -0.66
LINC01888-202ENST00000457602 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
LINC01888-202ENST00000457602 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
LINC01888-202ENST00000457602 NFKBIEO00221 500 aa10.89□□□□□ -0.67
LINC01888-202ENST00000457602 FSTL1Q12841 308 aa10.89□□□□□ -0.67
LINC01888-202ENST00000457602 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
LINC01888-202ENST00000457602 DLEC1Q9Y238 1755 aa10.89□□□□□ -0.67
LINC01888-202ENST00000457602 GLTPD2A6NH11 291 aa10.88□□□□□ -0.67
LINC01888-202ENST00000457602 NRG2O14511 850 aaPredicted RBP10.88□□□□□ -0.67
LINC01888-202ENST00000457602 SBF1O95248 1867 aa10.88□□□□□ -0.67
LINC01888-202ENST00000457602 PRELPP51888 382 aa10.88□□□□□ -0.67
LINC01888-202ENST00000457602 MTMR2Q13614 643 aa10.88□□□□□ -0.67
LINC01888-202ENST00000457602 RIC3Q7Z5B4 369 aa10.88□□□□□ -0.67
LINC01888-202ENST00000457602 NBPF5PQ86XG9 351 aaPredicted RBP10.88□□□□□ -0.67
LINC01888-202ENST00000457602 LIMD1Q9UGP4 676 aa10.88□□□□□ -0.67
LINC01888-202ENST00000457602 CEP350Q5VT06 3117 aa10.88□□□□□ -0.67
LINC01888-202ENST00000457602 FAM177BA6PVY3 158 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 HTATSF1O43719 755 aaKnown RBP10.87□□□□□ -0.67
LINC01888-202ENST00000457602 GDF9O60383 454 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 VEGFAP15692 232 aaPredicted RBP10.87□□□□□ -0.67
LINC01888-202ENST00000457602 HTRA3P83110 453 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 PRR20EP86478 221 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 PRR20CP86479 221 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 PRR20DP86480 221 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 PRR20BP86481 221 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 PRR20AP86496 221 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 TAF7Q15545 349 aaPredicted RBP10.87□□□□□ -0.67
LINC01888-202ENST00000457602 TUSC1Q2TAM9 212 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 SMC1BQ8NDV3 1235 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 CNKSR1Q969H4 720 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 MIS18AQ9NYP9 233 aa10.87□□□□□ -0.67
LINC01888-202ENST00000457602 TNRC6CQ9HCJ0 1690 aaKnown RBP10.86□□□□□ -0.67
LINC01888-202ENST00000457602 SPDYE5A6NIY4 337 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 SRGNP10124 158 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 ERFEQ4G0M1 354 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 STYK1Q6J9G0 422 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 CLEC4GQ6UXB4 293 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 NGEFQ8N5V2 710 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 DNAJC5GQ8N7S2 189 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 MASTLQ96GX5 879 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 NIP7Q9Y221 180 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC01888-202ENST00000457602 ANKRD31Q8N7Z5 1873 aa10.86□□□□□ -0.67
LINC01888-202ENST00000457602 LCE2BO14633 110 aa10.85□□□□□ -0.67
LINC01888-202ENST00000457602 GTF2E1P29083 439 aaPredicted RBP10.85□□□□□ -0.67
LINC01888-202ENST00000457602 PRPF38BQ5VTL8 546 aaKnown RBP10.85□□□□□ -0.67
LINC01888-202ENST00000457602 PRPF40BQ6NWY9 871 aaKnown RBP10.85□□□□□ -0.67
LINC01888-202ENST00000457602 TPTE2Q6XPS3 522 aa10.85□□□□□ -0.67
LINC01888-202ENST00000457602 PRR7Q8TB68 274 aa10.85□□□□□ -0.67
LINC01888-202ENST00000457602 PNISRQ8TF01 805 aaKnown RBP10.85□□□□□ -0.67
LINC01888-202ENST00000457602 TAOK3Q9H2K8 898 aa10.85□□□□□ -0.67
LINC01888-202ENST00000457602 BCORQ6W2J9 1755 aa10.85□□□□□ -0.67
LINC01888-202ENST00000457602 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 COL11A2P13942 1736 aaPredicted RBP10.84□□□□□ -0.67
LINC01888-202ENST00000457602 TIAM2Q8IVF5 1701 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 WDR90Q96KV7 1748 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 SOGA3Q5TF21 947 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 DESI1Q6ICB0 168 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
LINC01888-202ENST00000457602 NBPF15Q8N660 670 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 FAM117AQ9C073 453 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 PKD2L1Q9P0L9 805 aa10.84□□□□□ -0.67
LINC01888-202ENST00000457602 CCDC88AQ3V6T2 1871 aa10.83□□□□□ -0.68
LINC01888-202ENST00000457602 CFAP99D6REC4 459 aa10.83□□□□□ -0.68
LINC01888-202ENST00000457602 NPR1P16066 1061 aa10.83□□□□□ -0.68
LINC01888-202ENST00000457602 TRIM32Q13049 653 aa10.83□□□□□ -0.68
LINC01888-202ENST00000457602 KLRG1Q96E93 195 aa10.83□□□□□ -0.68
LINC01888-202ENST00000457602 THUMPD2Q9BTF0 503 aaKnown RBP10.83□□□□□ -0.68
LINC01888-202ENST00000457602 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
LINC01888-202ENST00000457602 ZBTB3Q9H5J0 574 aa10.83□□□□□ -0.68
LINC01888-202ENST00000457602 RRP7AQ9Y3A4 280 aaKnown RBP10.83□□□□□ -0.68
LINC01888-202ENST00000457602 LTBP3Q9NS15 1303 aa10.83□□□□□ -0.68
LINC01888-202ENST00000457602 NFE2L2Q16236 605 aa10.82□□□□□ -0.68
LINC01888-202ENST00000457602 HLFQ16534 295 aa10.82□□□□□ -0.68
LINC01888-202ENST00000457602 QPCTQ16769 361 aa10.82□□□□□ -0.68
LINC01888-202ENST00000457602 CCDC93Q567U6 631 aa10.82□□□□□ -0.68
LINC01888-202ENST00000457602 PLEKHF1Q96S99 279 aa10.82□□□□□ -0.68
LINC01888-202ENST00000457602 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
LINC01888-202ENST00000457602 CACNA1SQ13698 1873 aa10.82□□□□□ -0.68
LINC01888-202ENST00000457602 SLX4Q8IY92 1834 aa10.81□□□□□ -0.68
LINC01888-202ENST00000457602 POTECB2RU33 542 aa10.81□□□□□ -0.68
LINC01888-202ENST00000457602 LILRB3O75022 631 aa10.81□□□□□ -0.68
LINC01888-202ENST00000457602 DDNO94850 711 aaPredicted RBP10.81□□□□□ -0.68
LINC01888-202ENST00000457602 CD2BP2O95400 341 aaKnown RBP10.81□□□□□ -0.68
LINC01888-202ENST00000457602 MYL6BP14649 208 aa10.81□□□□□ -0.68
LINC01888-202ENST00000457602 CLK2P49760 499 aaKnown RBP10.81□□□□□ -0.68
LINC01888-202ENST00000457602 EIF4A1P60842 406 aaKnown RBP10.81□□□□□ -0.68
LINC01888-202ENST00000457602 PTPRNQ16849 979 aa10.81□□□□□ -0.68
LINC01888-202ENST00000457602 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
LINC01888-202ENST00000457602 FER1L6Q2WGJ9 1857 aa10.81□□□□□ -0.68
LINC01888-202ENST00000457602 ZBTB24O43167 697 aaPredicted RBP10.8□□□□□ -0.68
LINC01888-202ENST00000457602 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
LINC01888-202ENST00000457602 PTCRAQ6ISU1 281 aaPredicted RBP10.8□□□□□ -0.68
LINC01888-202ENST00000457602 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
LINC01888-202ENST00000457602 NYXQ9GZU5 481 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms