RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
SNHG17-208ENST00000456953 ANKRD18AQ8IVF6 992 aa17.09■□□□□ 0.33
SNHG17-208ENST00000456953 LAS1LQ9Y4W2 734 aaKnown RBP17.09■□□□□ 0.33
SNHG17-208ENST00000456953 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
SNHG17-208ENST00000456953 RBBP6Q7Z6E9 1792 aaKnown RBP17.08■□□□□ 0.33
SNHG17-208ENST00000456953 MANSC4A6NHS7 340 aaPredicted RBP17.08■□□□□ 0.32
SNHG17-208ENST00000456953 PDE8AO60658 829 aa17.08■□□□□ 0.32
SNHG17-208ENST00000456953 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
SNHG17-208ENST00000456953 GOLGA2Q08379 1002 aa17.08■□□□□ 0.32
SNHG17-208ENST00000456953 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.32
SNHG17-208ENST00000456953 APOBEC3FQ8IUX4 373 aaKnown RBP17.08■□□□□ 0.32
SNHG17-208ENST00000456953 SASH1O94885 1247 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 PRKG1Q13976 671 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 MXD3Q9BW11 206 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 SZT2Q5T011 3432 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 CEP290O15078 2479 aa17.07■□□□□ 0.32
SNHG17-208ENST00000456953 ZNF646O15015 1829 aaPredicted RBP17.06■□□□□ 0.32
SNHG17-208ENST00000456953 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNHG17-208ENST00000456953 NEUROD2Q15784 382 aa17.06■□□□□ 0.32
SNHG17-208ENST00000456953 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
SNHG17-208ENST00000456953 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
SNHG17-208ENST00000456953 ANGEL1Q9UNK9 670 aaKnown RBP17.06■□□□□ 0.32
SNHG17-208ENST00000456953 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-208ENST00000456953 ZBTB48P10074 688 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-208ENST00000456953 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
SNHG17-208ENST00000456953 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
SNHG17-208ENST00000456953 SLC10A4Q96EP9 437 aa17.05■□□□□ 0.32
SNHG17-208ENST00000456953 ERO1AQ96HE7 468 aa17.05■□□□□ 0.32
SNHG17-208ENST00000456953 MYD88Q99836 296 aa17.05■□□□□ 0.32
SNHG17-208ENST00000456953 COA1Q9GZY4 146 aa17.05■□□□□ 0.32
SNHG17-208ENST00000456953 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-208ENST00000456953 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
SNHG17-208ENST00000456953 ARMC5Q96C12 935 aa17.04■□□□□ 0.32
SNHG17-208ENST00000456953 MINPP1Q9UNW1 487 aa17.04■□□□□ 0.32
SNHG17-208ENST00000456953 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
SNHG17-208ENST00000456953 PTPN22Q9Y2R2 807 aa17.04■□□□□ 0.32
SNHG17-208ENST00000456953 RANBP2P49792 3224 aaKnown RBP17.04■□□□□ 0.32
SNHG17-208ENST00000456953 LAMB1P07942 1786 aa17.03■□□□□ 0.32
SNHG17-208ENST00000456953 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNHG17-208ENST00000456953 BSDC1Q9NW68 430 aaPredicted RBP17.03■□□□□ 0.32
SNHG17-208ENST00000456953 UNCXA6NJT0 531 aa17.02■□□□□ 0.32
SNHG17-208ENST00000456953 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
SNHG17-208ENST00000456953 CTSWP56202 376 aa17.02■□□□□ 0.32
SNHG17-208ENST00000456953 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
SNHG17-208ENST00000456953 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.32
SNHG17-208ENST00000456953 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.32
SNHG17-208ENST00000456953 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
SNHG17-208ENST00000456953 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.32
SNHG17-208ENST00000456953 PHAXQ9H814 394 aaKnown RBP17.02■□□□□ 0.32
SNHG17-208ENST00000456953 PPP1R12BO60237 982 aaPredicted RBP17.01■□□□□ 0.31
SNHG17-208ENST00000456953 EN2P19622 333 aaPredicted RBP17.01■□□□□ 0.31
SNHG17-208ENST00000456953 TTLL5Q6EMB2 1281 aa17.01■□□□□ 0.31
SNHG17-208ENST00000456953 OTUD7BQ6GQQ9 843 aa17.01■□□□□ 0.31
SNHG17-208ENST00000456953 KIAA0825Q8IV33 1275 aa17.01■□□□□ 0.31
SNHG17-208ENST00000456953 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
SNHG17-208ENST00000456953 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
SNHG17-208ENST00000456953 TRIOBPQ9H2D6 2365 aa17.01■□□□□ 0.31
SNHG17-208ENST00000456953 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
SNHG17-208ENST00000456953 CRHR2Q13324 411 aa17■□□□□ 0.31
SNHG17-208ENST00000456953 CD99L2Q8TCZ2 262 aa17■□□□□ 0.31
SNHG17-208ENST00000456953 CLMNQ96JQ2 1002 aa17■□□□□ 0.31
SNHG17-208ENST00000456953 METTL22Q9BUU2 404 aaPredicted RBP17■□□□□ 0.31
SNHG17-208ENST00000456953 FZD1Q9UP38 647 aa17■□□□□ 0.31
SNHG17-208ENST00000456953 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
SNHG17-208ENST00000456953 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
SNHG17-208ENST00000456953 TXNRD3Q86VQ6 643 aa16.99■□□□□ 0.31
SNHG17-208ENST00000456953 TTLL11Q8NHH1 800 aa16.99■□□□□ 0.31
SNHG17-208ENST00000456953 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
SNHG17-208ENST00000456953 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
SNHG17-208ENST00000456953 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
SNHG17-208ENST00000456953 SSC5DA1L4H1 1573 aa16.98■□□□□ 0.31
SNHG17-208ENST00000456953 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
SNHG17-208ENST00000456953 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
SNHG17-208ENST00000456953 SP3Q02447 781 aa16.98■□□□□ 0.31
SNHG17-208ENST00000456953 DLGAP5Q15398 846 aa16.98■□□□□ 0.31
SNHG17-208ENST00000456953 GREM2Q9H772 168 aa16.98■□□□□ 0.31
SNHG17-208ENST00000456953 COLQQ9Y215 455 aaPredicted RBP16.98■□□□□ 0.31
SNHG17-208ENST00000456953 A0A0C4DFX4 3053 aa16.98■□□□□ 0.31
SNHG17-208ENST00000456953 GTF2IP78347 998 aa16.97■□□□□ 0.31
SNHG17-208ENST00000456953 RALBP1Q15311 655 aa16.97■□□□□ 0.31
SNHG17-208ENST00000456953 SUPT20HL1Q3ZLR7 823 aa16.97■□□□□ 0.31
SNHG17-208ENST00000456953 MTMR14Q8NCE2 650 aa16.97■□□□□ 0.31
SNHG17-208ENST00000456953 ZNF333Q96JL9 665 aa16.97■□□□□ 0.31
SNHG17-208ENST00000456953 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.97■□□□□ 0.31
SNHG17-208ENST00000456953 MYH3P11055 1940 aa16.97■□□□□ 0.31
SNHG17-208ENST00000456953 ZNF804BA4D1E1 1349 aa16.96■□□□□ 0.31
SNHG17-208ENST00000456953 ANKRD2Q9GZV1 360 aa16.96■□□□□ 0.31
SNHG17-208ENST00000456953 TESPA1A2RU30 521 aaPredicted RBP16.95■□□□□ 0.3
SNHG17-208ENST00000456953 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
SNHG17-208ENST00000456953 KLRK1P26718 216 aa16.95■□□□□ 0.3
SNHG17-208ENST00000456953 IGHMBP2P38935 993 aaKnown RBP16.95■□□□□ 0.3
SNHG17-208ENST00000456953 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
SNHG17-208ENST00000456953 ARHGEF6Q15052 776 aa16.95■□□□□ 0.3
SNHG17-208ENST00000456953 NBPF11Q86T75 865 aa16.95■□□□□ 0.3
SNHG17-208ENST00000456953 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
SNHG17-208ENST00000456953 ECM29Q5VYK3 1845 aa16.94■□□□□ 0.3
SNHG17-208ENST00000456953 MYO1BO43795 1136 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms