RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ZKSCAN5Q9Y2L8 839 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 ZNF500O60304 480 aaPredicted RBP21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 MCM5P33992 734 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 RESTQ13127 1097 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 GIMAP6Q6P9H5 292 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 NLRP10Q86W26 655 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 SLC4A9Q96Q91 983 aa21.72■■□□□ 1.07
SEMA3B-209ENST00000456560 CYP19A1P11511 503 aaPredicted RBP21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 HCLS1P14317 486 aaPredicted RBP21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 FKBP4Q02790 459 aaKnown RBP eCLIP21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 PDCL3Q9H2J4 239 aa21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 COL14A1Q05707 1796 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 LRP6O75581 1613 aa21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 TERF1P54274 439 aa21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 LRRFIP1Q32MZ4 808 aaKnown RBP21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 GORABQ5T7V8 394 aa21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 SYNE4Q8N205 404 aa21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 ABCC12Q96J65 1359 aa21.71■■□□□ 1.07
SEMA3B-209ENST00000456560 RIC1Q4ADV7 1423 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 LEO1Q8WVC0 666 aaPredicted RBP21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 TFIP11Q9UBB9 837 aaKnown RBP21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 R3HCC1Q9Y3T6 440 aaKnown RBP21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 RIPOR2Q9Y4F9 1068 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 ZFYP08048 801 aaPredicted RBP21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 FGD1P98174 961 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 SCARF1Q14162 830 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 HSP90AB3PQ58FF7 597 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 TAF7LQ5H9L4 462 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 NSUN7Q8NE18 718 aaKnown RBP21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 TTLL11Q8NHH1 800 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 C8orf37Q96NL8 207 aa21.7■■□□□ 1.06
SEMA3B-209ENST00000456560 FOXP2O15409 715 aa21.69■■□□□ 1.06
SEMA3B-209ENST00000456560 CTDNEP1O95476 244 aa21.69■■□□□ 1.06
SEMA3B-209ENST00000456560 APOBRQ0VD83 1088 aa21.69■■□□□ 1.06
SEMA3B-209ENST00000456560 SPATA32Q96LK8 384 aa21.69■■□□□ 1.06
SEMA3B-209ENST00000456560 LIG1P18858 919 aa21.68■■□□□ 1.06
SEMA3B-209ENST00000456560 TTLL5Q6EMB2 1281 aa21.68■■□□□ 1.06
SEMA3B-209ENST00000456560 FBXL16Q8N461 479 aa21.68■■□□□ 1.06
SEMA3B-209ENST00000456560 DDX11Q96FC9 970 aa21.68■■□□□ 1.06
SEMA3B-209ENST00000456560 ANKRD36CQ5JPF3 1778 aa21.68■■□□□ 1.06
SEMA3B-209ENST00000456560 ZSCAN16Q9H4T2 348 aaPredicted RBP21.68■■□□□ 1.06
SEMA3B-209ENST00000456560 GPTP24298 496 aa21.67■■□□□ 1.06
SEMA3B-209ENST00000456560 ZAP70P43403 619 aa21.67■■□□□ 1.06
SEMA3B-209ENST00000456560 NWD2Q9ULI1 1742 aa21.67■■□□□ 1.06
SEMA3B-209ENST00000456560 ATP2B3Q16720 1220 aa21.67■■□□□ 1.06
SEMA3B-209ENST00000456560 ZNF274Q96GC6 653 aaPredicted RBP21.67■■□□□ 1.06
SEMA3B-209ENST00000456560 GREM2Q9H772 168 aa21.67■■□□□ 1.06
SEMA3B-209ENST00000456560 PLCH1Q4KWH8 1693 aa21.66■■□□□ 1.06
SEMA3B-209ENST00000456560 ITGA6P23229 1130 aa21.66■■□□□ 1.06
SEMA3B-209ENST00000456560 CTSWP56202 376 aa21.66■■□□□ 1.06
SEMA3B-209ENST00000456560 NAA16Q6N069 864 aaPredicted RBP21.66■■□□□ 1.06
SEMA3B-209ENST00000456560 ZMYND15Q9H091 742 aa21.66■■□□□ 1.06
SEMA3B-209ENST00000456560 USP25Q9UHP3 1055 aa21.66■■□□□ 1.06
SEMA3B-209ENST00000456560 CTNNA3Q9UI47 895 aa21.66■■□□□ 1.06
SEMA3B-209ENST00000456560 H3BQV1 296 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 EVCP57679 992 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 HMGN5P82970 282 aaKnown RBP21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 IFFO2Q5TF58 517 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 APPBP2Q92624 585 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 ZBTB1Q9Y2K1 713 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 SALL1Q9NSC2 1324 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 KDM4AO75164 1064 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 PDIA3P30101 505 aaKnown RBP21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 WASHC4Q2M389 1173 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 METTL24Q5JXM2 366 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 LDHAL6AQ6ZMR3 332 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 NGLY1Q96IV0 654 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 PGBD1Q96JS3 809 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 ZNF512BQ96KM6 892 aaPredicted RBP21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 NUP62CLQ9H1M0 184 aa21.65■■□□□ 1.06
SEMA3B-209ENST00000456560 PTPDC1A2A3K4 754 aa21.64■■□□□ 1.06
SEMA3B-209ENST00000456560 VGLL2Q8N8G2 317 aa21.64■■□□□ 1.06
SEMA3B-209ENST00000456560 ANKRD18BA2A2Z9 1011 aa21.64■■□□□ 1.05
SEMA3B-209ENST00000456560 ERVV-1B6SEH8 477 aa21.64■■□□□ 1.05
SEMA3B-209ENST00000456560 IRS4O14654 1257 aaPredicted RBP21.64■■□□□ 1.05
SEMA3B-209ENST00000456560 ADCY5O95622 1261 aa21.64■■□□□ 1.05
SEMA3B-209ENST00000456560 CCDC192P0DO97 292 aa21.64■■□□□ 1.05
SEMA3B-209ENST00000456560 ADD1P35611 737 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-209ENST00000456560 AKAP11Q9UKA4 1901 aa21.64■■□□□ 1.05
SEMA3B-209ENST00000456560 NUP98P52948 1817 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 MYH3P11055 1940 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 EXOC5O00471 708 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 RBM10P98175 930 aaKnown RBP21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 MAP3K11Q16584 847 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 PI16Q6UXB8 463 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 PUS7LQ9H0K6 701 aaKnown RBP21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 GOLGA6L4A6NEF3 574 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 FGAP02671 866 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 MYH7P12883 1935 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 CCT2P78371 535 aaKnown RBP21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 DDX19AQ9NUU7 478 aaKnown RBP21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 DACT1Q9NYF0 836 aa21.63■■□□□ 1.05
SEMA3B-209ENST00000456560 PTMAP06454 111 aaKnown RBP21.62■■□□□ 1.05
SEMA3B-209ENST00000456560 IL6STP40189 918 aaPredicted RBP21.62■■□□□ 1.05
SEMA3B-209ENST00000456560 MCAMP43121 646 aa21.62■■□□□ 1.05
SEMA3B-209ENST00000456560 RBM43Q6ZSC3 357 aaKnown RBP21.62■■□□□ 1.05
SEMA3B-209ENST00000456560 CHST3Q7LGC8 479 aa21.62■■□□□ 1.05
SEMA3B-209ENST00000456560 CHMP4CQ96CF2 233 aa21.62■■□□□ 1.05
SEMA3B-209ENST00000456560 PKNOX2Q96KN3 472 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms