RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 MROH5Q6ZUA9 1318 aa22.59■■□□□ 1.21
PDLIM2-215ENST00000456545 SNAP23O00161 211 aa22.59■■□□□ 1.21
PDLIM2-215ENST00000456545 METTL24Q5JXM2 366 aa22.59■■□□□ 1.21
PDLIM2-215ENST00000456545 RBM26Q5T8P6 1007 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-215ENST00000456545 MEIS3Q99687 375 aa22.59■■□□□ 1.21
PDLIM2-215ENST00000456545 TNNQ9UQP3 1299 aa22.59■■□□□ 1.21
PDLIM2-215ENST00000456545 RSBN1LQ6PCB5 846 aaPredicted RBP22.58■■□□□ 1.21
PDLIM2-215ENST00000456545 ZNF804AQ7Z570 1209 aa22.58■■□□□ 1.21
PDLIM2-215ENST00000456545 KLHDC4Q8TBB5 520 aa22.58■■□□□ 1.21
PDLIM2-215ENST00000456545 RIPOR2Q9Y4F9 1068 aa22.58■■□□□ 1.21
PDLIM2-215ENST00000456545 KLRK1P26718 216 aa22.57■■□□□ 1.2
PDLIM2-215ENST00000456545 UBE4AQ14139 1066 aa22.57■■□□□ 1.2
PDLIM2-215ENST00000456545 LRRC24Q50LG9 513 aa22.57■■□□□ 1.2
PDLIM2-215ENST00000456545 AGBL3Q8NEM8 1001 aa22.57■■□□□ 1.2
PDLIM2-215ENST00000456545 TTLL5Q6EMB2 1281 aa22.56■■□□□ 1.2
PDLIM2-215ENST00000456545 SAMD7Q7Z3H4 446 aa22.56■■□□□ 1.2
PDLIM2-215ENST00000456545 DZIP1LQ8IYY4 767 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-215ENST00000456545 TMEM57Q8N5G2 664 aa22.56■■□□□ 1.2
PDLIM2-215ENST00000456545 CD209Q9NNX6 404 aa22.56■■□□□ 1.2
PDLIM2-215ENST00000456545 SHTN1A0MZ66 631 aa22.55■■□□□ 1.2
PDLIM2-215ENST00000456545 HTRA3P83110 453 aa22.55■■□□□ 1.2
PDLIM2-215ENST00000456545 TBC1D10BQ4KMP7 808 aaPredicted RBP22.55■■□□□ 1.2
PDLIM2-215ENST00000456545 STRIP1Q5VSL9 837 aa22.55■■□□□ 1.2
PDLIM2-215ENST00000456545 C15orf52Q6ZUT6 534 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-215ENST00000456545 SCN9AQ15858 1988 aa22.54■■□□□ 1.2
PDLIM2-215ENST00000456545 GNAI2P04899 355 aa22.54■■□□□ 1.2
PDLIM2-215ENST00000456545 GTF2IP78347 998 aa22.54■■□□□ 1.2
PDLIM2-215ENST00000456545 EYA2O00167 538 aa22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 ITGBL1O95965 494 aaPredicted RBP22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 USP17L8P0C7I0 530 aa22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 VPS37DQ86XT2 251 aa22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 OGFOD1Q8N543 542 aa22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 TRPM4Q8TD43 1214 aa22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 ZC3H15Q8WU90 426 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 SIL1Q9H173 461 aa22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 MYO3BQ8WXR4 1341 aa22.53■■□□□ 1.2
PDLIM2-215ENST00000456545 PDE8BO95263 885 aa22.52■■□□□ 1.2
PDLIM2-215ENST00000456545 MS4A1P11836 297 aa22.52■■□□□ 1.2
PDLIM2-215ENST00000456545 HIBADHP31937 336 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-215ENST00000456545 RFX5P48382 616 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-215ENST00000456545 HIRAP54198 1017 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-215ENST00000456545 PTPN12Q05209 780 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-215ENST00000456545 ITPRIPQ8IWB1 547 aa22.52■■□□□ 1.2
PDLIM2-215ENST00000456545 KIF4BQ2VIQ3 1234 aa22.51■■□□□ 1.19
PDLIM2-215ENST00000456545 CAVIN4Q5BKX8 364 aa22.51■■□□□ 1.19
PDLIM2-215ENST00000456545 DACT2Q5SW24 774 aa22.51■■□□□ 1.19
PDLIM2-215ENST00000456545 SRGAP3O43295 1099 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 FRAT2O75474 233 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 IFIT1P09914 478 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 GYG1P46976 350 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 DCPSQ96C86 337 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 MXD3Q9BW11 206 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 CEP126Q9P2H0 1117 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 FBXO3Q9UK99 471 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 RCAN3Q9UKA8 241 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 HDAC9Q9UKV0 1011 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 PASKQ96RG2 1323 aa22.5■■□□□ 1.19
PDLIM2-215ENST00000456545 A0A1B0GUL6 1792 aa22.49■■□□□ 1.19
PDLIM2-215ENST00000456545 ADAMTSL1Q8N6G6 1762 aa22.49■■□□□ 1.19
PDLIM2-215ENST00000456545 TMEM88BA6NKF7 163 aa22.49■■□□□ 1.19
PDLIM2-215ENST00000456545 IL1R1P14778 569 aa22.49■■□□□ 1.19
PDLIM2-215ENST00000456545 CDC37L1Q7L3B6 337 aa22.49■■□□□ 1.19
PDLIM2-215ENST00000456545 CREBZFQ9NS37 354 aa22.49■■□□□ 1.19
PDLIM2-215ENST00000456545 PSME4Q14997 1843 aa22.48■■□□□ 1.19
PDLIM2-215ENST00000456545 PUM3Q15397 648 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-215ENST00000456545 GMLQ99445 158 aa22.48■■□□□ 1.19
PDLIM2-215ENST00000456545 MYOZ2Q9NPC6 264 aa22.48■■□□□ 1.19
PDLIM2-215ENST00000456545 PGAP2Q9UHJ9 254 aa22.48■■□□□ 1.19
PDLIM2-215ENST00000456545 PA2G4Q9UQ80 394 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-215ENST00000456545 IRS2Q9Y4H2 1338 aa22.48■■□□□ 1.19
PDLIM2-215ENST00000456545 CIAO1O76071 339 aa22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 SLC5A1P13866 664 aa22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 IL15P40933 162 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 ZNF280AP59817 542 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 KIAA0825Q8IV33 1275 aa22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 FAM84BQ96KN1 310 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 YTHDC1Q96MU7 727 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 GLIS2Q9BZE0 524 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-215ENST00000456545 SASH1O94885 1247 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 EGFRP00533 1210 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 MMP14P50281 582 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 ATG9AQ7Z3C6 839 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 USP48Q86UV5 1035 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 DNAJC5GQ8N7S2 189 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 JAG2Q9Y219 1238 aa22.46■■□□□ 1.19
PDLIM2-215ENST00000456545 TRAF5O00463 557 aa22.45■■□□□ 1.18
PDLIM2-215ENST00000456545 RLBP1P12271 317 aa22.45■■□□□ 1.18
PDLIM2-215ENST00000456545 SCARF1Q14162 830 aa22.45■■□□□ 1.18
PDLIM2-215ENST00000456545 VGLL2Q8N8G2 317 aa22.45■■□□□ 1.18
PDLIM2-215ENST00000456545 PANK1Q8TE04 598 aa22.45■■□□□ 1.18
PDLIM2-215ENST00000456545 KLRG1Q96E93 195 aa22.45■■□□□ 1.18
PDLIM2-215ENST00000456545 ZNF609O15014 1411 aa22.44■■□□□ 1.18
PDLIM2-215ENST00000456545 MTX1Q13505 466 aa22.44■■□□□ 1.18
PDLIM2-215ENST00000456545 KRT26Q7Z3Y9 468 aa22.44■■□□□ 1.18
PDLIM2-215ENST00000456545 SULF1Q8IWU6 871 aa22.44■■□□□ 1.18
PDLIM2-215ENST00000456545 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.44■■□□□ 1.18
PDLIM2-215ENST00000456545 TDRD7Q8NHU6 1098 aaKnown RBP22.44■■□□□ 1.18
PDLIM2-215ENST00000456545 LPIN2Q92539 896 aa22.44■■□□□ 1.18
PDLIM2-215ENST00000456545 ZNF408Q9H9D4 720 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms