RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 CWF19L2Q2TBE0 894 aaKnown RBP11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 BICDL1Q6ZP65 573 aa11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 USP42Q9H9J4 1324 aaKnown RBP11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 NEURL1BA8MQ27 555 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 IGKV5-2P06315 115 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 NDUFV2P19404 249 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 QPCTQ16769 361 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 EXOC6Q8TAG9 804 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 QSER1Q2KHR3 1735 aa11.83□□□□□ -0.52
PTCHD1-202ENST00000456522 FAM177BA6PVY3 158 aa11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 ALDH1L1O75891 902 aa11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 TBC1D9BQ66K14 1250 aa11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
PTCHD1-202ENST00000456522 GYS1P13807 737 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 GCKRQ14397 625 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 MSL1Q68DK7 614 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 CLEC4GQ6UXB4 293 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 ZNF34Q8IZ26 560 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 C9orf78Q9NZ63 289 aaPredicted RBP11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
PTCHD1-202ENST00000456522 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 MEIS3Q99687 375 aa11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 PDGFDQ9GZP0 370 aaPredicted RBP11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
PTCHD1-202ENST00000456522 GRM8O00222 908 aa11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 ZBTB7BO15156 539 aaPredicted RBP11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 NFIXQ14938 502 aa11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 PARP10Q53GL7 1025 aa11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 SUSD4Q5VX71 490 aa11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 POM121Q96HA1 1249 aa11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
PTCHD1-202ENST00000456522 GNAI3P08754 354 aa11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 UBTFL1P0CB47 393 aaPredicted RBP11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 UBE3BQ7Z3V4 1068 aa11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 FAM89AQ96GI7 184 aa11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 CHMP4BQ9H444 224 aaKnown RBP11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 TRMT112Q9UI30 125 aaKnown RBP11.78□□□□□ -0.52
PTCHD1-202ENST00000456522 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 NPHP1O15259 732 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 FDX1P10109 184 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 NBPF5PQ86XG9 351 aaPredicted RBP11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 HS3ST6Q96QI5 342 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 PCDHGC3Q9UN70 934 aa11.77□□□□□ -0.53
PTCHD1-202ENST00000456522 H7C1W4 665 aa11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 RAD21O60216 631 aa11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 PCCAP05165 728 aaPredicted RBP11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 GTF2E1P29083 439 aaPredicted RBP11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 TM4SF1P30408 202 aa11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 ZBTB38Q8NAP3 1195 aaPredicted RBP11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 LRRFIP2Q9Y608 721 aaKnown RBP11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
PTCHD1-202ENST00000456522 APBB1O00213 710 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 ZBTB7AO95365 584 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 NTSR2O95665 410 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 GNAI2P04899 355 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 SERPINB2P05120 415 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 MMP10P09238 476 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 CASP7P55210 303 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 DDR1Q08345 913 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 CCDC24Q8N4L8 307 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 SUCLG2Q96I99 432 aa11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 ZFRQ96KR1 1074 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-202ENST00000456522 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms