RNA–Protein interactions for RNA: ENST00000456489.1

ITSN1-221, Transcript of intersectin 1, humanhuman

TSL 2

Gene ITSN1, Length 485 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-221ENST00000456489 FOXR1Q6PIV2 292 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 NPM2Q86SE8 214 aaKnown RBP7.52□□□□□ -1.21
ITSN1-221ENST00000456489 SIX5Q8N196 739 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 PGBD3Q8N328 593 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.52□□□□□ -1.21
ITSN1-221ENST00000456489 CRBNQ96SW2 442 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 STK17AQ9UEE5 414 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 PARP3Q9Y6F1 533 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 KIAA1210Q9ULL0 1709 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 TMEM131LA2VDJ0 1609 aa7.52□□□□□ -1.21
ITSN1-221ENST00000456489 SFI1A8K8P3 1242 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 DKK1O94907 266 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 PPP2R1AP30153 589 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 FOXK2Q01167 660 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 BECN1Q14457 450 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 NBPF1Q3BBV0 1214 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 CC2D1BQ5T0F9 858 aaKnown RBP7.51□□□□□ -1.21
ITSN1-221ENST00000456489 DUSP27Q5VZP5 1158 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 SLC9A9Q8IVB4 645 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 DDX17Q92841 729 aaKnown RBP7.51□□□□□ -1.21
ITSN1-221ENST00000456489 AMOTL2Q9Y2J4 779 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 TRPM2O94759 1503 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 ADAMTS13Q76LX8 1427 aa7.51□□□□□ -1.21
ITSN1-221ENST00000456489 PNPLA6Q8IY17 1366 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 PIK3R4Q99570 1358 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 ATP4AP20648 1035 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 SLFN5Q08AF3 891 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 RGL3Q3MIN7 710 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 CRTC2Q53ET0 693 aaPredicted RBP7.5□□□□□ -1.21
ITSN1-221ENST00000456489 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
ITSN1-221ENST00000456489 TRMT2AQ8IZ69 625 aaKnown RBP7.5□□□□□ -1.21
ITSN1-221ENST00000456489 TSEN2Q8NCE0 465 aaKnown RBP7.5□□□□□ -1.21
ITSN1-221ENST00000456489 TRERF1Q96PN7 1200 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 USP21Q9UK80 565 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 ADAMTS8Q9UP79 889 aa7.5□□□□□ -1.21
ITSN1-221ENST00000456489 SBNO2Q9Y2G9 1366 aa7.49□□□□□ -1.21
ITSN1-221ENST00000456489 ZDHHC1Q8WTX9 485 aa7.49□□□□□ -1.21
ITSN1-221ENST00000456489 TSPAN10Q9H1Z9 355 aaPredicted RBP7.49□□□□□ -1.21
ITSN1-221ENST00000456489 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
ITSN1-221ENST00000456489 DCCP43146 1447 aa7.49□□□□□ -1.21
ITSN1-221ENST00000456489 MST1RQ04912 1400 aa7.49□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L21D6R901 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 M0R2N6 131 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 SLURP2P0DP57 97 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 RFX1P22670 979 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 SEC13P55735 322 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 PTK7Q13308 1070 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 PTPRUQ92729 1446 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 PUS7Q96PZ0 661 aaKnown RBP7.48□□□□□ -1.21
ITSN1-221ENST00000456489 CRISPLD1Q9H336 500 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 UPF2Q9HAU5 1272 aaKnown RBP7.48□□□□□ -1.21
ITSN1-221ENST00000456489 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 MYOM2P54296 1465 aa7.48□□□□□ -1.21
ITSN1-221ENST00000456489 FAM196BA6NMK8 535 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 TATP17735 454 aaPredicted RBP7.47□□□□□ -1.21
ITSN1-221ENST00000456489 NOS2P35228 1153 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 TXLNAP40222 546 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
ITSN1-221ENST00000456489 DPYDQ12882 1025 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 UBAP2LQ14157 1087 aaKnown RBP7.47□□□□□ -1.21
ITSN1-221ENST00000456489 LBRQ14739 615 aaKnown RBP7.47□□□□□ -1.21
ITSN1-221ENST00000456489 TEAD4Q15561 434 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 ARSJQ5FYB0 599 aaPredicted RBP7.47□□□□□ -1.21
ITSN1-221ENST00000456489 PMFBP1Q8TBY8 1022 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 WHAMMQ8TF30 809 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 MBIPQ9NS73 344 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 ZDHHC3Q9NYG2 299 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 SRCAPQ6ZRS2 3230 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 SPHKAPQ2M3C7 1700 aa7.47□□□□□ -1.21
ITSN1-221ENST00000456489 XRN1Q8IZH2 1706 aaKnown RBP7.47□□□□□ -1.21
ITSN1-221ENST00000456489 POLR3AO14802 1390 aaPredicted RBP7.46□□□□□ -1.21
ITSN1-221ENST00000456489 FAM181BA6NEQ2 426 aa7.46□□□□□ -1.22
ITSN1-221ENST00000456489 PLIN1O60240 522 aa7.46□□□□□ -1.22
ITSN1-221ENST00000456489 LGR5O75473 907 aa7.46□□□□□ -1.22
ITSN1-221ENST00000456489 CT47B1P0C2W7 299 aaPredicted RBP7.46□□□□□ -1.22
ITSN1-221ENST00000456489 NFKBIBQ15653 356 aa7.46□□□□□ -1.22
ITSN1-221ENST00000456489 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
ITSN1-221ENST00000456489 LAS1LQ9Y4W2 734 aaKnown RBP7.46□□□□□ -1.22
ITSN1-221ENST00000456489 PLEKHH1Q9ULM0 1364 aa7.46□□□□□ -1.22
ITSN1-221ENST00000456489 ATRNO75882 1429 aa7.45□□□□□ -1.22
ITSN1-221ENST00000456489 NALCNQ8IZF0 1738 aa7.45□□□□□ -1.22
ITSN1-221ENST00000456489 A0A1W2PNR3 127 aa7.45□□□□□ -1.22
ITSN1-221ENST00000456489 SERTM1A2A2V5 107 aa7.45□□□□□ -1.22
ITSN1-221ENST00000456489 EIF5BO60841 1220 aaKnown RBP7.45□□□□□ -1.22
ITSN1-221ENST00000456489 MX2P20592 715 aa7.45□□□□□ -1.22
ITSN1-221ENST00000456489 C8orf34Q49A92 452 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms