RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PHLPP2Q6ZVD8 1323 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 NEO1Q92859 1461 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 EVCP57679 992 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
CLIP4-208ENST00000456385 NCAPHQ15003 741 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 NAA16Q6N069 864 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-208ENST00000456385 STOX1Q6ZVD7 989 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 MRPS27Q92552 414 aaKnown RBP11.98□□□□□ -0.49
CLIP4-208ENST00000456385 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
CLIP4-208ENST00000456385 BABAM1Q9NWV8 329 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 JCADQ9P266 1359 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 EFCAB8A8MWE9 144 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 PFKFB2O60825 505 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 KCNJ6P48051 423 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 KRT32Q14532 448 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 ZRSR1Q15695 479 aaKnown RBP11.98□□□□□ -0.49
CLIP4-208ENST00000456385 ZSCAN26Q16670 478 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-208ENST00000456385 ZNF396Q96N95 335 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-208ENST00000456385 TSPYL1Q9H0U9 437 aa11.98□□□□□ -0.49
CLIP4-208ENST00000456385 FANCCQ00597 558 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 MLECQ14165 292 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 MUM1L1Q5H9M0 696 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 CC2D1AQ6P1N0 951 aaPredicted RBP11.97□□□□□ -0.49
CLIP4-208ENST00000456385 REXO1L1PQ8IX06 675 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 C10orf67Q8IYJ2 551 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 DPF2Q92785 391 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 HOXC9P31274 260 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 LRRFIP1Q32MZ4 808 aaKnown RBP11.97□□□□□ -0.49
CLIP4-208ENST00000456385 OTUD7BQ6GQQ9 843 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 CCDC191Q8NCU4 936 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 HSD3B7Q9H2F3 369 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 RSPH14Q9UHP6 348 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 CLIC4Q9Y696 253 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
CLIP4-208ENST00000456385 TECPR2O15040 1411 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 A0A0G2JLW4 131 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 NRDCO43847 1150 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 POLR3DP05423 398 aaPredicted RBP11.96□□□□□ -0.49
CLIP4-208ENST00000456385 TEFQ10587 303 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 GNL2Q13823 731 aaKnown RBP11.96□□□□□ -0.49
CLIP4-208ENST00000456385 CCDC158Q5M9N0 1113 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 ADALQ6DHV7 355 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 CHST3Q7LGC8 479 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 WDR24Q96S15 920 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 BPIFA3Q9BQP9 254 aa11.96□□□□□ -0.49
CLIP4-208ENST00000456385 LLPHQ9BRT6 129 aaKnown RBP11.96□□□□□ -0.49
CLIP4-208ENST00000456385 RICTORQ6R327 1708 aa11.96□□□□□ -0.5
CLIP4-208ENST00000456385 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
CLIP4-208ENST00000456385 MYO1CO00159 1063 aa11.95□□□□□ -0.5
CLIP4-208ENST00000456385 TUBB4AP04350 444 aa11.95□□□□□ -0.5
CLIP4-208ENST00000456385 TNNT3P45378 269 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-208ENST00000456385 VWA3AA6NCI4 1184 aa11.95□□□□□ -0.5
CLIP4-208ENST00000456385 SLC3A2P08195 630 aaKnown RBP11.95□□□□□ -0.5
CLIP4-208ENST00000456385 NLRP6P59044 892 aa11.95□□□□□ -0.5
CLIP4-208ENST00000456385 RASSF4Q9H2L5 321 aa11.95□□□□□ -0.5
CLIP4-208ENST00000456385 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 GRM8O00222 908 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 SF3A1Q15459 793 aaKnown RBP11.94□□□□□ -0.5
CLIP4-208ENST00000456385 LINC00301Q8NCQ3 95 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
CLIP4-208ENST00000456385 SRRTQ9BXP5 876 aaKnown RBP11.94□□□□□ -0.5
CLIP4-208ENST00000456385 PARD6BQ9BYG5 372 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 ADAM21Q9UKJ8 722 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 ZNF609O15014 1411 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 H3BQF6 201 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 ATP8B1O43520 1251 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 ZNF202O95125 648 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
CLIP4-208ENST00000456385 LMAN1P49257 510 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 UBASH3AP57075 661 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 NLRP12P59046 1061 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 GPS2Q13227 327 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 KSR2Q6VAB6 950 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 FUT8Q9BYC5 575 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 GJB4Q9NTQ9 266 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 RTEL1Q9NZ71 1219 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 DBF4Q9UBU7 674 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-208ENST00000456385 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
CLIP4-208ENST00000456385 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 SALL1Q9NSC2 1324 aa11.94□□□□□ -0.5
CLIP4-208ENST00000456385 CEMIPQ8WUJ3 1361 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 BTBD11A6QL63 1104 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 SERPINC1P01008 464 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
CLIP4-208ENST00000456385 STK38Q15208 465 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 ATL3Q6DD88 541 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 DHX32Q7L7V1 743 aaKnown RBP11.93□□□□□ -0.5
CLIP4-208ENST00000456385 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
CLIP4-208ENST00000456385 ARFGAP3Q9NP61 516 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
CLIP4-208ENST00000456385 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
CLIP4-208ENST00000456385 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
CLIP4-208ENST00000456385 A0A1W2PQ27 194 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 A0A1W2PQ64 194 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 A0A1W2PQD8 194 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 CCP110O43303 1012 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms