RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 VEGFBP49765 207 aa22.51■■□□□ 1.19
MSH6-207ENST00000456246 LDHAL6AQ6ZMR3 332 aa22.51■■□□□ 1.19
MSH6-207ENST00000456246 C15orf52Q6ZUT6 534 aaKnown RBP22.51■■□□□ 1.19
MSH6-207ENST00000456246 DCPSQ96C86 337 aaKnown RBP22.51■■□□□ 1.19
MSH6-207ENST00000456246 SUCLG2Q96I99 432 aa22.51■■□□□ 1.19
MSH6-207ENST00000456246 GMLQ99445 158 aa22.51■■□□□ 1.19
MSH6-207ENST00000456246 CNNM1Q9NRU3 951 aa22.51■■□□□ 1.19
MSH6-207ENST00000456246 A0A1B0GUL6 1792 aa22.5■■□□□ 1.19
MSH6-207ENST00000456246 WTIPA6NIX2 430 aaPredicted RBP22.5■■□□□ 1.19
MSH6-207ENST00000456246 CELF2O95319 508 aaKnown RBP22.5■■□□□ 1.19
MSH6-207ENST00000456246 NBPF7P0C2Y1 421 aaPredicted RBP22.5■■□□□ 1.19
MSH6-207ENST00000456246 BRPF1P55201 1214 aaPredicted RBP22.5■■□□□ 1.19
MSH6-207ENST00000456246 CST9Q5W186 159 aa22.5■■□□□ 1.19
MSH6-207ENST00000456246 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
MSH6-207ENST00000456246 TLL2Q9Y6L7 1015 aa22.5■■□□□ 1.19
MSH6-207ENST00000456246 EGFRP00533 1210 aa22.49■■□□□ 1.19
MSH6-207ENST00000456246 ECE1P42892 770 aa22.49■■□□□ 1.19
MSH6-207ENST00000456246 FMR1Q06787 632 aaKnown RBP eCLIP22.49■■□□□ 1.194e-7■■■■□ 21.8
MSH6-207ENST00000456246 RABL6Q3YEC7 729 aaPredicted RBP22.49■■□□□ 1.19
MSH6-207ENST00000456246 DACT2Q5SW24 774 aa22.49■■□□□ 1.19
MSH6-207ENST00000456246 RBM26Q5T8P6 1007 aaKnown RBP22.49■■□□□ 1.19
MSH6-207ENST00000456246 KRT26Q7Z3Y9 468 aa22.49■■□□□ 1.19
MSH6-207ENST00000456246 TXNRD3Q86VQ6 643 aa22.49■■□□□ 1.19
MSH6-207ENST00000456246 OGFOD1Q8N543 542 aa22.48■■□□□ 1.19
MSH6-207ENST00000456246 KAZALD1Q96I82 304 aa22.48■■□□□ 1.19
MSH6-207ENST00000456246 HHIPL1Q96JK4 782 aa22.48■■□□□ 1.19
MSH6-207ENST00000456246 ZNF804AQ7Z570 1209 aa22.47■■□□□ 1.19
MSH6-207ENST00000456246 SULF1Q8IWU6 871 aa22.47■■□□□ 1.19
MSH6-207ENST00000456246 API5Q9BZZ5 524 aaKnown RBP22.47■■□□□ 1.19
MSH6-207ENST00000456246 MYOZ2Q9NPC6 264 aa22.47■■□□□ 1.19
MSH6-207ENST00000456246 ZNF646O15015 1829 aaPredicted RBP22.46■■□□□ 1.19
MSH6-207ENST00000456246 TAF5LO75529 589 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 KLRK1P26718 216 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 TTLL5Q6EMB2 1281 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 USP48Q86UV5 1035 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 FBXW7Q969H0 707 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 ZNF594Q96JF6 807 aaPredicted RBP22.46■■□□□ 1.19
MSH6-207ENST00000456246 BICC1Q9H694 974 aaKnown RBP22.46■■□□□ 1.19
MSH6-207ENST00000456246 CD209Q9NNX6 404 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 GGA3Q9NZ52 723 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 WDR33Q9C0J8 1336 aaKnown RBP22.46■■□□□ 1.19
MSH6-207ENST00000456246 IRS2Q9Y4H2 1338 aa22.46■■□□□ 1.19
MSH6-207ENST00000456246 SAPCD2Q86UD0 394 aa22.45■■□□□ 1.18
MSH6-207ENST00000456246 HELBQ8NG08 1087 aaPredicted RBP22.45■■□□□ 1.18
MSH6-207ENST00000456246 AIDAQ96BJ3 306 aa22.45■■□□□ 1.18
MSH6-207ENST00000456246 USP44Q9H0E7 712 aa22.45■■□□□ 1.18
MSH6-207ENST00000456246 MROH5Q6ZUA9 1318 aa22.45■■□□□ 1.18
MSH6-207ENST00000456246 KIF16BQ96L93 1317 aa22.45■■□□□ 1.18
MSH6-207ENST00000456246 PITPNM2Q9BZ72 1349 aa22.45■■□□□ 1.18
MSH6-207ENST00000456246 UBE4AQ14139 1066 aa22.44■■□□□ 1.18
MSH6-207ENST00000456246 PAXIP1Q6ZW49 1069 aaPredicted RBP22.44■■□□□ 1.18
MSH6-207ENST00000456246 CAPNS2Q96L46 248 aa22.44■■□□□ 1.18
MSH6-207ENST00000456246 THSD7BQ9C0I4 1608 aa22.44■■□□□ 1.18
MSH6-207ENST00000456246 ZNF408Q9H9D4 720 aa22.44■■□□□ 1.18
MSH6-207ENST00000456246 HDAC9Q9UKV0 1011 aa22.44■■□□□ 1.18
MSH6-207ENST00000456246 HDAC5Q9UQL6 1122 aa22.44■■□□□ 1.18
MSH6-207ENST00000456246 MAP2K1Q02750 393 aaPredicted RBP22.43■■□□□ 1.18
MSH6-207ENST00000456246 SCARF1Q14162 830 aa22.43■■□□□ 1.18
MSH6-207ENST00000456246 POLR2AP24928 1970 aaKnown RBP22.43■■□□□ 1.18
MSH6-207ENST00000456246 IL1R1P14778 569 aa22.42■■□□□ 1.18
MSH6-207ENST00000456246 RARSP54136 660 aaKnown RBP22.42■■□□□ 1.18
MSH6-207ENST00000456246 GTF2IP78347 998 aa22.42■■□□□ 1.18
MSH6-207ENST00000456246 MIER1Q8N108 512 aa22.42■■□□□ 1.18
MSH6-207ENST00000456246 ANKRD44Q8N8A2 993 aa22.42■■□□□ 1.18
MSH6-207ENST00000456246 NOB1Q9ULX3 412 aaKnown RBP22.42■■□□□ 1.18
MSH6-207ENST00000456246 PLIN1O60240 522 aa22.41■■□□□ 1.18
MSH6-207ENST00000456246 FKBP1AP62942 108 aaKnown RBP22.41■■□□□ 1.18
MSH6-207ENST00000456246 IFFO2Q5TF58 517 aa22.41■■□□□ 1.18
MSH6-207ENST00000456246 ANGEL2Q5VTE6 544 aaKnown RBP22.41■■□□□ 1.18
MSH6-207ENST00000456246 ARHGAP45Q92619 1136 aa22.41■■□□□ 1.18
MSH6-207ENST00000456246 WBP1LQ9NX94 342 aa22.41■■□□□ 1.18
MSH6-207ENST00000456246 RIPOR2Q9Y4F9 1068 aa22.41■■□□□ 1.18
MSH6-207ENST00000456246 ADM5C9JUS6 153 aa22.4■■□□□ 1.18
MSH6-207ENST00000456246 SNAP23O00161 211 aa22.4■■□□□ 1.18
MSH6-207ENST00000456246 CYP4F22Q6NT55 531 aa22.4■■□□□ 1.18
MSH6-207ENST00000456246 C2orf69Q8N8R5 385 aa22.4■■□□□ 1.18
MSH6-207ENST00000456246 UBTFL1P0CB47 393 aaPredicted RBP22.39■■□□□ 1.17
MSH6-207ENST00000456246 MAP2K2P36507 400 aa22.39■■□□□ 1.17
MSH6-207ENST00000456246 MXD3Q9BW11 206 aa22.39■■□□□ 1.17
MSH6-207ENST00000456246 GBA2Q9HCG7 927 aaPredicted RBP22.39■■□□□ 1.17
MSH6-207ENST00000456246 ASTN2O75129 1339 aaPredicted RBP22.38■■□□□ 1.17
MSH6-207ENST00000456246 CTCFP49711 727 aaPredicted RBP22.38■■□□□ 1.17
MSH6-207ENST00000456246 KIAA0825Q8IV33 1275 aa22.38■■□□□ 1.17
MSH6-207ENST00000456246 PUS3Q9BZE2 481 aaKnown RBP22.38■■□□□ 1.17
MSH6-207ENST00000456246 WNT10BO00744 389 aa22.37■■□□□ 1.17
MSH6-207ENST00000456246 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
MSH6-207ENST00000456246 HUNKP57058 714 aa22.37■■□□□ 1.17
MSH6-207ENST00000456246 METTL24Q5JXM2 366 aa22.37■■□□□ 1.17
MSH6-207ENST00000456246 CDCA5Q96FF9 252 aa22.37■■□□□ 1.17
MSH6-207ENST00000456246 FOXN1O15353 648 aa22.36■■□□□ 1.17
MSH6-207ENST00000456246 SASH1O94885 1247 aa22.36■■□□□ 1.17
MSH6-207ENST00000456246 HIBADHP31937 336 aaKnown RBP22.36■■□□□ 1.17
MSH6-207ENST00000456246 FKBP1BP68106 108 aa22.36■■□□□ 1.17
MSH6-207ENST00000456246 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.171e-6■□□□□ 11
MSH6-207ENST00000456246 GRM1Q13255 1194 aa22.36■■□□□ 1.17
MSH6-207ENST00000456246 NBPF9Q3BBW0 867 aa22.36■■□□□ 1.17
MSH6-207ENST00000456246 BEGAINQ9BUH8 593 aa22.36■■□□□ 1.17
MSH6-207ENST00000456246 FAM205AQ6ZU69 1335 aa22.35■■□□□ 1.17
MSH6-207ENST00000456246 COL13A1Q5TAT6 717 aaPredicted RBP22.35■■□□□ 1.17
MSH6-207ENST00000456246 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms