RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 PDE4AP27815 886 aa13.22□□□□□ -0.29
SYPL1-202ENST00000455385 RTKN2Q8IZC4 609 aa13.22□□□□□ -0.29
SYPL1-202ENST00000455385 DBNDD2Q9BQY9 259 aa13.22□□□□□ -0.29
SYPL1-202ENST00000455385 DBNLQ9UJU6 430 aaKnown RBP13.22□□□□□ -0.29
SYPL1-202ENST00000455385 XAGE2Q96GT9 111 aa13.22□□□□□ -0.29
SYPL1-202ENST00000455385 ZNF609O15014 1411 aa13.22□□□□□ -0.29
SYPL1-202ENST00000455385 ARFGEF1Q9Y6D6 1849 aa13.22□□□□□ -0.29
SYPL1-202ENST00000455385 NFKBIEO00221 500 aa13.21□□□□□ -0.29
SYPL1-202ENST00000455385 KCNJ4P48050 445 aa13.21□□□□□ -0.29
SYPL1-202ENST00000455385 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
SYPL1-202ENST00000455385 GYG1P46976 350 aa13.21□□□□□ -0.3
SYPL1-202ENST00000455385 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.3
SYPL1-202ENST00000455385 SOGA3Q5TF21 947 aa13.21□□□□□ -0.3
SYPL1-202ENST00000455385 FAM84BQ96KN1 310 aaPredicted RBP13.21□□□□□ -0.3
SYPL1-202ENST00000455385 PSMD1Q99460 953 aa13.21□□□□□ -0.3
SYPL1-202ENST00000455385 FER1L6Q2WGJ9 1857 aa13.2□□□□□ -0.3
SYPL1-202ENST00000455385 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
SYPL1-202ENST00000455385 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
SYPL1-202ENST00000455385 SLC5A1P13866 664 aa13.2□□□□□ -0.3
SYPL1-202ENST00000455385 BCAMP50895 628 aa13.2□□□□□ -0.3
SYPL1-202ENST00000455385 PRELPP51888 382 aa13.2□□□□□ -0.3
SYPL1-202ENST00000455385 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
SYPL1-202ENST00000455385 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
SYPL1-202ENST00000455385 FKBP4Q02790 459 aaKnown RBP eCLIP13.2□□□□□ -0.3
SYPL1-202ENST00000455385 C15orf52Q6ZUT6 534 aaKnown RBP13.2□□□□□ -0.3
SYPL1-202ENST00000455385 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
SYPL1-202ENST00000455385 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
SYPL1-202ENST00000455385 RASSF7Q02833 373 aa13.19□□□□□ -0.3
SYPL1-202ENST00000455385 WASHC4Q2M389 1173 aa13.19□□□□□ -0.3
SYPL1-202ENST00000455385 ARHGAP27Q6ZUM4 889 aa13.19□□□□□ -0.3
SYPL1-202ENST00000455385 FBXO33Q7Z6M2 555 aa13.19□□□□□ -0.3
SYPL1-202ENST00000455385 PLEKHM2Q8IWE5 1019 aa13.19□□□□□ -0.3
SYPL1-202ENST00000455385 PHKA1P46020 1223 aa13.18□□□□□ -0.3
SYPL1-202ENST00000455385 AOC3Q16853 763 aa13.18□□□□□ -0.3
SYPL1-202ENST00000455385 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
SYPL1-202ENST00000455385 ZC3H12CQ9C0D7 883 aaKnown RBP13.18□□□□□ -0.3
SYPL1-202ENST00000455385 GPR162Q16538 588 aa13.18□□□□□ -0.3
SYPL1-202ENST00000455385 CCDC102BQ68D86 513 aa13.18□□□□□ -0.3
SYPL1-202ENST00000455385 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
SYPL1-202ENST00000455385 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
SYPL1-202ENST00000455385 HIBADHP31937 336 aaKnown RBP13.17□□□□□ -0.3
SYPL1-202ENST00000455385 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 DOK7Q18PE1 504 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 MX1P20591 662 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 PDE1AP54750 535 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 GORABQ5T7V8 394 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 EYA3Q99504 573 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 STAP2Q9UGK3 403 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 LTBP3Q9NS15 1303 aa13.17□□□□□ -0.3
SYPL1-202ENST00000455385 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
SYPL1-202ENST00000455385 PPIP5K2O43314 1243 aa13.16□□□□□ -0.3
SYPL1-202ENST00000455385 SCARF1Q14162 830 aa13.16□□□□□ -0.3
SYPL1-202ENST00000455385 CAVIN4Q5BKX8 364 aa13.16□□□□□ -0.3
SYPL1-202ENST00000455385 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
SYPL1-202ENST00000455385 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
SYPL1-202ENST00000455385 COL4A5P29400 1685 aa13.16□□□□□ -0.3
SYPL1-202ENST00000455385 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
SYPL1-202ENST00000455385 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
SYPL1-202ENST00000455385 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 CHD4Q14839 1912 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 RGS3P49796 1198 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 VPS37DQ86XT2 251 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 NDUFB9Q9Y6M9 179 aa13.15□□□□□ -0.3
SYPL1-202ENST00000455385 IL1R1P14778 569 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 ATP5JP18859 108 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
SYPL1-202ENST00000455385 TTC39AQ5SRH9 613 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 PI16Q6UXB8 463 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 ZNF512BQ96KM6 892 aaPredicted RBP13.14□□□□□ -0.31
SYPL1-202ENST00000455385 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 OSBPL3Q9H4L5 887 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 MCAMP43121 646 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 RASGRF1Q13972 1273 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 SNRKQ9NRH2 765 aa13.14□□□□□ -0.31
SYPL1-202ENST00000455385 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 ECE2O60344 883 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 HMG20BQ9P0W2 317 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 SBF1O95248 1867 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 AKAP11Q9UKA4 1901 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 UQCRFS1P1P0C7P4 283 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 JAG2Q9Y219 1238 aa13.13□□□□□ -0.31
SYPL1-202ENST00000455385 LMNB1P20700 586 aa13.12□□□□□ -0.31
SYPL1-202ENST00000455385 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
SYPL1-202ENST00000455385 EDC3Q96F86 508 aaKnown RBP13.12□□□□□ -0.31
SYPL1-202ENST00000455385 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
SYPL1-202ENST00000455385 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
SYPL1-202ENST00000455385 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
SYPL1-202ENST00000455385 SCN9AQ15858 1988 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms