RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CHMP4AQ9BY43 222 aa20.56■□□□□ 0.88
GPC1-206ENST00000455111 ITGA6P23229 1130 aa20.55■□□□□ 0.88
GPC1-206ENST00000455111 HUNKP57058 714 aa20.55■□□□□ 0.88
GPC1-206ENST00000455111 FOXO4P98177 505 aa20.55■□□□□ 0.88
GPC1-206ENST00000455111 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
GPC1-206ENST00000455111 EPHA10Q5JZY3 1008 aa20.55■□□□□ 0.88
GPC1-206ENST00000455111 BEND3Q5T5X7 828 aa20.55■□□□□ 0.88
GPC1-206ENST00000455111 ANGEL2Q5VTE6 544 aaKnown RBP20.55■□□□□ 0.88
GPC1-206ENST00000455111 LINS1Q8NG48 757 aa20.55■□□□□ 0.88
GPC1-206ENST00000455111 ANP32CO43423 234 aa20.54■□□□□ 0.88
GPC1-206ENST00000455111 SCARF1Q14162 830 aa20.54■□□□□ 0.88
GPC1-206ENST00000455111 PODNQ7Z5L7 613 aa20.54■□□□□ 0.88
GPC1-206ENST00000455111 CDCA5Q96FF9 252 aa20.54■□□□□ 0.88
GPC1-206ENST00000455111 GBA2Q9HCG7 927 aaPredicted RBP20.54■□□□□ 0.88
GPC1-206ENST00000455111 ZNF521Q96K83 1311 aa20.53■□□□□ 0.88
GPC1-206ENST00000455111 USP17L3A6NCW0 530 aa20.53■□□□□ 0.88
GPC1-206ENST00000455111 USP17L4A6NCW7 530 aa20.53■□□□□ 0.88
GPC1-206ENST00000455111 USP17L1Q7RTZ2 530 aa20.53■□□□□ 0.88
GPC1-206ENST00000455111 DCPSQ96C86 337 aaKnown RBP20.53■□□□□ 0.88
GPC1-206ENST00000455111 MYOZ2Q9NPC6 264 aa20.53■□□□□ 0.88
GPC1-206ENST00000455111 BRPF1P55201 1214 aaPredicted RBP20.52■□□□□ 0.88
GPC1-206ENST00000455111 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
GPC1-206ENST00000455111 PAPPA2Q9BXP8 1791 aa20.51■□□□□ 0.87
GPC1-206ENST00000455111 G3V3G9 751 aa20.51■□□□□ 0.87
GPC1-206ENST00000455111 USP17L8P0C7I0 530 aa20.51■□□□□ 0.87
GPC1-206ENST00000455111 DCAF8Q5TAQ9 597 aa20.51■□□□□ 0.87
GPC1-206ENST00000455111 RGMBQ6NW40 437 aa20.51■□□□□ 0.87
GPC1-206ENST00000455111 ABHD8Q96I13 439 aa20.51■□□□□ 0.87
GPC1-206ENST00000455111 ZNF804BA4D1E1 1349 aa20.51■□□□□ 0.87
GPC1-206ENST00000455111 CHRNDQ07001 517 aa20.5■□□□□ 0.87
GPC1-206ENST00000455111 MOB2Q70IA6 237 aa20.5■□□□□ 0.87
GPC1-206ENST00000455111 ECM29Q5VYK3 1845 aa20.49■□□□□ 0.87
GPC1-206ENST00000455111 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
GPC1-206ENST00000455111 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
GPC1-206ENST00000455111 PRAMEF18Q5VWM3 479 aa20.49■□□□□ 0.87
GPC1-206ENST00000455111 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
GPC1-206ENST00000455111 COA1Q9GZY4 146 aa20.49■□□□□ 0.87
GPC1-206ENST00000455111 LEMD3Q9Y2U8 911 aa20.49■□□□□ 0.87
GPC1-206ENST00000455111 TAF5LO75529 589 aa20.48■□□□□ 0.87
GPC1-206ENST00000455111 SULF1Q8IWU6 871 aa20.48■□□□□ 0.87
GPC1-206ENST00000455111 HELBQ8NG08 1087 aaPredicted RBP20.48■□□□□ 0.87
GPC1-206ENST00000455111 KAZALD1Q96I82 304 aa20.48■□□□□ 0.87
GPC1-206ENST00000455111 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
GPC1-206ENST00000455111 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
GPC1-206ENST00000455111 AKAP11Q9UKA4 1901 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 WNT10BO00744 389 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 SLC10A3P09131 477 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
GPC1-206ENST00000455111 NOGQ13253 232 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 STRIP1Q5VSL9 837 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 CERS5Q8N5B7 392 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 C2orf69Q8N8R5 385 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 ZNF594Q96JF6 807 aaPredicted RBP20.47■□□□□ 0.87
GPC1-206ENST00000455111 PITPNM2Q9BZ72 1349 aa20.47■□□□□ 0.87
GPC1-206ENST00000455111 PCDHAC2Q9Y5I4 1007 aa20.46■□□□□ 0.87
GPC1-206ENST00000455111 AOX1Q06278 1338 aa20.46■□□□□ 0.87
GPC1-206ENST00000455111 SASH1O94885 1247 aa20.45■□□□□ 0.86
GPC1-206ENST00000455111 RASAL3Q86YV0 1011 aa20.45■□□□□ 0.86
GPC1-206ENST00000455111 BEGAINQ9BUH8 593 aa20.45■□□□□ 0.86
GPC1-206ENST00000455111 CD209Q9NNX6 404 aa20.45■□□□□ 0.86
GPC1-206ENST00000455111 ANKRD18BA2A2Z9 1011 aa20.44■□□□□ 0.86
GPC1-206ENST00000455111 ZNF157P51786 506 aaPredicted RBP20.44■□□□□ 0.86
GPC1-206ENST00000455111 GTF2IP78347 998 aa20.44■□□□□ 0.86
GPC1-206ENST00000455111 LMBR1LQ6UX01 489 aa20.44■□□□□ 0.86
GPC1-206ENST00000455111 FBXW7Q969H0 707 aa20.44■□□□□ 0.86
GPC1-206ENST00000455111 CSRNP1Q96S65 589 aa20.44■□□□□ 0.86
GPC1-206ENST00000455111 MPHOSPH8Q99549 860 aa20.44■□□□□ 0.86
GPC1-206ENST00000455111 ANKRD2Q9GZV1 360 aa20.44■□□□□ 0.86
GPC1-206ENST00000455111 GRM8O00222 908 aa20.43■□□□□ 0.86
GPC1-206ENST00000455111 TTLL5Q6EMB2 1281 aa20.43■□□□□ 0.86
GPC1-206ENST00000455111 C15orf52Q6ZUT6 534 aaKnown RBP20.43■□□□□ 0.86
GPC1-206ENST00000455111 ARAP2Q8WZ64 1704 aa20.43■□□□□ 0.86
GPC1-206ENST00000455111 CA12O43570 354 aa20.42■□□□□ 0.86
GPC1-206ENST00000455111 KIAA0825Q8IV33 1275 aa20.42■□□□□ 0.86
GPC1-206ENST00000455111 SUCLG2Q96I99 432 aa20.42■□□□□ 0.86
GPC1-206ENST00000455111 MCOLN1Q9GZU1 580 aa20.42■□□□□ 0.86
GPC1-206ENST00000455111 SSC5DA1L4H1 1573 aa20.42■□□□□ 0.86
GPC1-206ENST00000455111 CCDC102AQ96A19 550 aa20.41■□□□□ 0.86
GPC1-206ENST00000455111 PUS3Q9BZE2 481 aaKnown RBP20.41■□□□□ 0.86
GPC1-206ENST00000455111 RNF186Q9NXI6 227 aa20.41■□□□□ 0.86
GPC1-206ENST00000455111 MYO3BQ8WXR4 1341 aa20.41■□□□□ 0.86
GPC1-206ENST00000455111 LAMB1P07942 1786 aa20.41■□□□□ 0.86
GPC1-206ENST00000455111 UBE2Q2LH0YL09 131 aa20.4■□□□□ 0.86
GPC1-206ENST00000455111 NBPF7P0C2Y1 421 aaPredicted RBP20.4■□□□□ 0.86
GPC1-206ENST00000455111 IFIT5Q13325 482 aaKnown RBP20.4■□□□□ 0.86
GPC1-206ENST00000455111 MRPL50Q8N5N7 158 aaKnown RBP20.4■□□□□ 0.86
GPC1-206ENST00000455111 FZD1Q9UP38 647 aa20.4■□□□□ 0.86
GPC1-206ENST00000455111 UTYO14607 1347 aa20.39■□□□□ 0.85
GPC1-206ENST00000455111 ALDH1L1O75891 902 aa20.39■□□□□ 0.85
GPC1-206ENST00000455111 IL1R1P14778 569 aa20.39■□□□□ 0.85
GPC1-206ENST00000455111 JAG2Q9Y219 1238 aa20.39■□□□□ 0.85
GPC1-206ENST00000455111 CHMP3Q9Y3E7 222 aa20.39■□□□□ 0.85
GPC1-206ENST00000455111 SLC4A10Q6U841 1118 aa20.38■□□□□ 0.85
GPC1-206ENST00000455111 TRPA1O75762 1119 aa20.37■□□□□ 0.85
GPC1-206ENST00000455111 FKBP1BP68106 108 aa20.37■□□□□ 0.85
GPC1-206ENST00000455111 SAGE1Q9NXZ1 904 aa20.37■□□□□ 0.85
GPC1-206ENST00000455111 OTOFQ9HC10 1997 aa20.36■□□□□ 0.85
GPC1-206ENST00000455111 KCNJ4P48050 445 aa20.36■□□□□ 0.85
GPC1-206ENST00000455111 ANKRD44Q8N8A2 993 aa20.36■□□□□ 0.85
GPC1-206ENST00000455111 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms