RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
HDAC9-217ENST00000455069 TAF7LQ5H9L4 462 aa14.19□□□□□ -0.14
HDAC9-217ENST00000455069 GPRC5DQ9NZD1 345 aa14.19□□□□□ -0.14
HDAC9-217ENST00000455069 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
HDAC9-217ENST00000455069 RIPOR2Q9Y4F9 1068 aa14.19□□□□□ -0.14
HDAC9-217ENST00000455069 ZNF609O15014 1411 aa14.18□□□□□ -0.14
HDAC9-217ENST00000455069 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
HDAC9-217ENST00000455069 CNNM1Q9NRU3 951 aa14.18□□□□□ -0.14
HDAC9-217ENST00000455069 ARAP2Q8WZ64 1704 aa14.18□□□□□ -0.14
HDAC9-217ENST00000455069 PTPN12Q05209 780 aaKnown RBP14.17□□□□□ -0.14
HDAC9-217ENST00000455069 TNIP1Q15025 636 aa14.17□□□□□ -0.14
HDAC9-217ENST00000455069 VGLL2Q8N8G2 317 aa14.17□□□□□ -0.14
HDAC9-217ENST00000455069 POLR2AP24928 1970 aaKnown RBP14.16□□□□□ -0.14
HDAC9-217ENST00000455069 MYH13Q9UKX3 1938 aa14.16□□□□□ -0.14
HDAC9-217ENST00000455069 PLIN1O60240 522 aa14.16□□□□□ -0.14
HDAC9-217ENST00000455069 GNAI3P08754 354 aa14.16□□□□□ -0.14
HDAC9-217ENST00000455069 VIL1P09327 827 aaKnown RBP14.16□□□□□ -0.14
HDAC9-217ENST00000455069 LMOD1P29536 600 aaPredicted RBP14.16□□□□□ -0.14
HDAC9-217ENST00000455069 EAPPQ56P03 285 aaPredicted RBP14.16□□□□□ -0.14
HDAC9-217ENST00000455069 C15orf52Q6ZUT6 534 aaKnown RBP14.16□□□□□ -0.14
HDAC9-217ENST00000455069 LDHDQ86WU2 507 aa14.16□□□□□ -0.14
HDAC9-217ENST00000455069 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
HDAC9-217ENST00000455069 KCNJ4P48050 445 aa14.15□□□□□ -0.14
HDAC9-217ENST00000455069 PODNQ7Z5L7 613 aa14.15□□□□□ -0.14
HDAC9-217ENST00000455069 COA1Q9GZY4 146 aa14.15□□□□□ -0.14
HDAC9-217ENST00000455069 RCAN3Q9UKA8 241 aa14.15□□□□□ -0.14
HDAC9-217ENST00000455069 MROH5Q6ZUA9 1318 aa14.15□□□□□ -0.15
HDAC9-217ENST00000455069 TRPM7Q96QT4 1865 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 G3V3G9 751 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 EGFRP00533 1210 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 MTX1Q13505 466 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 ATG9AQ7Z3C6 839 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 FTSJ3Q8IY81 847 aaKnown RBP14.14□□□□□ -0.15
HDAC9-217ENST00000455069 TRPM4Q8TD43 1214 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 PANK1Q8TE04 598 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 DPF2Q92785 391 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 MXD3Q9BW11 206 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 ADARB2Q9NS39 739 aaKnown RBP14.14□□□□□ -0.15
HDAC9-217ENST00000455069 CNOT7Q9UIV1 285 aaKnown RBP14.14□□□□□ -0.15
HDAC9-217ENST00000455069 PA2G4Q9UQ80 394 aaKnown RBP14.14□□□□□ -0.15
HDAC9-217ENST00000455069 PASKQ96RG2 1323 aa14.14□□□□□ -0.15
HDAC9-217ENST00000455069 EYA2O00167 538 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 HIRAP54198 1017 aaPredicted RBP14.13□□□□□ -0.15
HDAC9-217ENST00000455069 UBE4AQ14139 1066 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 METTL24Q5JXM2 366 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 DACT2Q5SW24 774 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 RSBN1LQ6PCB5 846 aaPredicted RBP14.13□□□□□ -0.15
HDAC9-217ENST00000455069 PNMA8AQ86V59 439 aaPredicted RBP14.13□□□□□ -0.15
HDAC9-217ENST00000455069 ITPRIPQ8IWB1 547 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 YTHDC1Q96MU7 727 aaKnown RBP14.13□□□□□ -0.15
HDAC9-217ENST00000455069 GMLQ99445 158 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 SIL1Q9H173 461 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 CD209Q9NNX6 404 aa14.13□□□□□ -0.15
HDAC9-217ENST00000455069 PNMA6EA0A0J9YXQ4 647 aa14.12□□□□□ -0.15
HDAC9-217ENST00000455069 USP17L3A6NCW0 530 aa14.12□□□□□ -0.15
HDAC9-217ENST00000455069 USP17L4A6NCW7 530 aa14.12□□□□□ -0.15
HDAC9-217ENST00000455069 ZBTB7BO15156 539 aaPredicted RBP14.12□□□□□ -0.15
HDAC9-217ENST00000455069 GNAI2P04899 355 aa14.12□□□□□ -0.15
HDAC9-217ENST00000455069 RPS12P25398 132 aaKnown RBP14.12□□□□□ -0.15
HDAC9-217ENST00000455069 COL13A1Q5TAT6 717 aaPredicted RBP14.12□□□□□ -0.15
HDAC9-217ENST00000455069 MAP1SQ66K74 1059 aaPredicted RBP14.12□□□□□ -0.15
HDAC9-217ENST00000455069 USP50Q70EL3 339 aaPredicted RBP14.12□□□□□ -0.15
HDAC9-217ENST00000455069 USP17L1Q7RTZ2 530 aa14.12□□□□□ -0.15
HDAC9-217ENST00000455069 SAMD7Q7Z3H4 446 aa14.12□□□□□ -0.15
HDAC9-217ENST00000455069 C1orf115Q9H7X2 142 aa14.12□□□□□ -0.15
HDAC9-217ENST00000455069 ECM29Q5VYK3 1845 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 CIAO1O76071 339 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 PDE8BO95263 885 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 ITGBL1O95965 494 aaPredicted RBP14.11□□□□□ -0.15
HDAC9-217ENST00000455069 HSPA1AP0DMV8 641 aaKnown RBP14.11□□□□□ -0.15
HDAC9-217ENST00000455069 HSPA1BP0DMV9 641 aaKnown RBP14.11□□□□□ -0.15
HDAC9-217ENST00000455069 IL1R1P14778 569 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 FGFR2P21802 821 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 GYG1P46976 350 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 COPRSQ9NQ92 184 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 HDAC5Q9UQL6 1122 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
HDAC9-217ENST00000455069 SRGAP3O43295 1099 aa14.1□□□□□ -0.15
HDAC9-217ENST00000455069 ZNF280AP59817 542 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-217ENST00000455069 GTF2IP78347 998 aa14.1□□□□□ -0.15
HDAC9-217ENST00000455069 TBC1D10BQ4KMP7 808 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-217ENST00000455069 STRIP1Q5VSL9 837 aa14.1□□□□□ -0.15
HDAC9-217ENST00000455069 ZNF804AQ7Z570 1209 aa14.1□□□□□ -0.15
HDAC9-217ENST00000455069 AGBL3Q8NEM8 1001 aa14.1□□□□□ -0.15
HDAC9-217ENST00000455069 FAM84BQ96KN1 310 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-217ENST00000455069 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
HDAC9-217ENST00000455069 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-217ENST00000455069 H7C1D1 291 aa14.09□□□□□ -0.15
HDAC9-217ENST00000455069 FMR1Q06787 632 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDAC9-217ENST00000455069 C20orf194Q5TEA3 1177 aa14.09□□□□□ -0.15
HDAC9-217ENST00000455069 TTLL5Q6EMB2 1281 aa14.09□□□□□ -0.15
HDAC9-217ENST00000455069 CNTROBQ8N137 903 aa14.09□□□□□ -0.15
HDAC9-217ENST00000455069 CERS5Q8N5B7 392 aa14.09□□□□□ -0.15
HDAC9-217ENST00000455069 TDRD7Q8NHU6 1098 aaKnown RBP14.09□□□□□ -0.15
HDAC9-217ENST00000455069 FBXW7Q969H0 707 aa14.09□□□□□ -0.15
HDAC9-217ENST00000455069 MKRN1Q9UHC7 482 aaKnown RBP14.09□□□□□ -0.15
HDAC9-217ENST00000455069 PGAP2Q9UHJ9 254 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms