RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 FZD1Q9UP38 647 aa20.34■□□□□ 0.85
NELFE-207ENST00000454913 TRIOBPQ9H2D6 2365 aa20.34■□□□□ 0.85
NELFE-207ENST00000454913 LDLRAD1Q5T700 205 aa20.33■□□□□ 0.85
NELFE-207ENST00000454913 APOBEC3FQ8IUX4 373 aaKnown RBP20.33■□□□□ 0.85
NELFE-207ENST00000454913 CCDC85AQ96PX6 553 aaPredicted RBP20.33■□□□□ 0.85
NELFE-207ENST00000454913 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.85
NELFE-207ENST00000454913 CEP290O15078 2479 aa20.32■□□□□ 0.84
NELFE-207ENST00000454913 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
NELFE-207ENST00000454913 DLL1O00548 723 aa20.32■□□□□ 0.84
NELFE-207ENST00000454913 HSP90B1P14625 803 aaKnown RBP20.32■□□□□ 0.84
NELFE-207ENST00000454913 ATP2B4P23634 1241 aa20.32■□□□□ 0.84
NELFE-207ENST00000454913 RIPK4P57078 832 aa20.32■□□□□ 0.84
NELFE-207ENST00000454913 KRT24Q2M2I5 525 aa20.32■□□□□ 0.84
NELFE-207ENST00000454913 CCDC152Q4G0S7 254 aa20.32■□□□□ 0.84
NELFE-207ENST00000454913 LAMB1P07942 1786 aa20.31■□□□□ 0.84
NELFE-207ENST00000454913 MYO3BQ8WXR4 1341 aa20.31■□□□□ 0.84
NELFE-207ENST00000454913 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
NELFE-207ENST00000454913 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
NELFE-207ENST00000454913 OTUD7BQ6GQQ9 843 aa20.31■□□□□ 0.84
NELFE-207ENST00000454913 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
NELFE-207ENST00000454913 ZNF646O15015 1829 aaPredicted RBP20.31■□□□□ 0.84
NELFE-207ENST00000454913 SPEF2Q9C093 1822 aa20.31■□□□□ 0.84
NELFE-207ENST00000454913 SZT2Q5T011 3432 aa20.3■□□□□ 0.84
NELFE-207ENST00000454913 ZBTB48P10074 688 aaPredicted RBP20.3■□□□□ 0.84
NELFE-207ENST00000454913 CRHR2Q13324 411 aa20.3■□□□□ 0.84
NELFE-207ENST00000454913 DACT2Q5SW24 774 aa20.3■□□□□ 0.84
NELFE-207ENST00000454913 ZBTB38Q8NAP3 1195 aaPredicted RBP20.3■□□□□ 0.84
NELFE-207ENST00000454913 WNK4Q96J92 1243 aa20.3■□□□□ 0.84
NELFE-207ENST00000454913 H0YGN5 161 aa20.29■□□□□ 0.84
NELFE-207ENST00000454913 SP3Q02447 781 aa20.29■□□□□ 0.84
NELFE-207ENST00000454913 DBF4Q9UBU7 674 aaPredicted RBP20.29■□□□□ 0.84
NELFE-207ENST00000454913 PPP1R12BO60237 982 aaPredicted RBP20.28■□□□□ 0.84
NELFE-207ENST00000454913 LMOD3Q0VAK6 560 aa20.28■□□□□ 0.84
NELFE-207ENST00000454913 TRIM28Q13263 835 aaKnown RBP20.28■□□□□ 0.84
NELFE-207ENST00000454913 SLC9C1Q4G0N8 1177 aa20.28■□□□□ 0.84
NELFE-207ENST00000454913 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
NELFE-207ENST00000454913 SLC17A8Q8NDX2 589 aa20.28■□□□□ 0.84
NELFE-207ENST00000454913 ZNF333Q96JL9 665 aa20.28■□□□□ 0.84
NELFE-207ENST00000454913 CLMNQ96JQ2 1002 aa20.28■□□□□ 0.84
NELFE-207ENST00000454913 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
NELFE-207ENST00000454913 MED23Q9ULK4 1368 aa20.28■□□□□ 0.84
NELFE-207ENST00000454913 MYCP01106 439 aaPredicted RBP20.27■□□□□ 0.84
NELFE-207ENST00000454913 STRIP1Q5VSL9 837 aa20.27■□□□□ 0.84
NELFE-207ENST00000454913 CHRDL2Q6WN34 429 aa20.27■□□□□ 0.84
NELFE-207ENST00000454913 RIC3Q7Z5B4 369 aa20.27■□□□□ 0.84
NELFE-207ENST00000454913 KIAA0825Q8IV33 1275 aa20.27■□□□□ 0.84
NELFE-207ENST00000454913 COL1A1P02452 1464 aaPredicted RBP20.26■□□□□ 0.83
NELFE-207ENST00000454913 WTIPA6NIX2 430 aaPredicted RBP20.26■□□□□ 0.83
NELFE-207ENST00000454913 PDE8AO60658 829 aa20.26■□□□□ 0.83
NELFE-207ENST00000454913 OTUD5Q96G74 571 aa20.26■□□□□ 0.83
NELFE-207ENST00000454913 DEFB129Q9H1M3 183 aa20.26■□□□□ 0.83
NELFE-207ENST00000454913 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
NELFE-207ENST00000454913 MMP14P50281 582 aa20.25■□□□□ 0.83
NELFE-207ENST00000454913 JARID2Q92833 1246 aaPredicted RBP20.25■□□□□ 0.83
NELFE-207ENST00000454913 GOLGA2Q08379 1002 aa20.24■□□□□ 0.83
NELFE-207ENST00000454913 ARHGEF6Q15052 776 aa20.24■□□□□ 0.83
NELFE-207ENST00000454913 CDC5LQ99459 802 aaKnown RBP20.24■□□□□ 0.83
NELFE-207ENST00000454913 COA1Q9GZY4 146 aa20.24■□□□□ 0.83
NELFE-207ENST00000454913 PTCH2Q9Y6C5 1203 aa20.24■□□□□ 0.83
NELFE-207ENST00000454913 ECM29Q5VYK3 1845 aa20.24■□□□□ 0.83
NELFE-207ENST00000454913 CAP1Q01518 475 aa20.23■□□□□ 0.83
NELFE-207ENST00000454913 MAP3K11Q16584 847 aa20.23■□□□□ 0.83
NELFE-207ENST00000454913 TTLL5Q6EMB2 1281 aa20.23■□□□□ 0.83
NELFE-207ENST00000454913 MYD88Q99836 296 aa20.23■□□□□ 0.83
NELFE-207ENST00000454913 SSC5DA1L4H1 1573 aa20.22■□□□□ 0.83
NELFE-207ENST00000454913 PCCAP05165 728 aaPredicted RBP20.22■□□□□ 0.83
NELFE-207ENST00000454913 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
NELFE-207ENST00000454913 CCT4P50991 539 aaKnown RBP20.22■□□□□ 0.83
NELFE-207ENST00000454913 CHL1O00533 1208 aa20.21■□□□□ 0.83
NELFE-207ENST00000454913 HOXB7P09629 217 aa20.21■□□□□ 0.83
NELFE-207ENST00000454913 IREB2P48200 963 aaKnown RBP20.21■□□□□ 0.83
NELFE-207ENST00000454913 DLGAP5Q15398 846 aa20.21■□□□□ 0.83
NELFE-207ENST00000454913 NEUROD2Q15784 382 aa20.21■□□□□ 0.83
NELFE-207ENST00000454913 RBM27Q9P2N5 1060 aaKnown RBP20.21■□□□□ 0.83
NELFE-207ENST00000454913 MYH3P11055 1940 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 GJA5P36382 358 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 SUPT20HL1Q3ZLR7 823 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 DPF3Q92784 378 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 PTPN18Q99952 460 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 CWC25Q9NXE8 425 aaPredicted RBP20.2■□□□□ 0.82
NELFE-207ENST00000454913 MINPP1Q9UNW1 487 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 PPP2R3BQ9Y5P8 575 aa20.2■□□□□ 0.82
NELFE-207ENST00000454913 GTF2IP78347 998 aa20.19■□□□□ 0.82
NELFE-207ENST00000454913 ZBED3Q96IU2 234 aaPredicted RBP20.19■□□□□ 0.82
NELFE-207ENST00000454913 OTOFQ9HC10 1997 aa20.19■□□□□ 0.82
NELFE-207ENST00000454913 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
NELFE-207ENST00000454913 MYO1BO43795 1136 aa20.18■□□□□ 0.82
NELFE-207ENST00000454913 CTSWP56202 376 aa20.18■□□□□ 0.82
NELFE-207ENST00000454913 TAF1CQ15572 869 aaPredicted RBP20.18■□□□□ 0.82
NELFE-207ENST00000454913 TXNRD3Q86VQ6 643 aa20.18■□□□□ 0.82
NELFE-207ENST00000454913 ANKRD13AQ8IZ07 590 aa20.18■□□□□ 0.82
NELFE-207ENST00000454913 SH3TC2Q8TF17 1288 aa20.18■□□□□ 0.82
NELFE-207ENST00000454913 VEZTQ9HBM0 779 aa20.18■□□□□ 0.82
NELFE-207ENST00000454913 BSDC1Q9NW68 430 aaPredicted RBP20.18■□□□□ 0.82
NELFE-207ENST00000454913 CLRN2A0PK11 232 aa20.17■□□□□ 0.82
NELFE-207ENST00000454913 ZFYVE28Q9HCC9 887 aa20.17■□□□□ 0.82
NELFE-207ENST00000454913 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
NELFE-207ENST00000454913 NBPF12Q5TAG4 269 aaPredicted RBP20.16■□□□□ 0.82
NELFE-207ENST00000454913 DUSP27Q5VZP5 1158 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms